RNA–Protein interactions for RNA: ENST00000533996.5

SOX9-AS1-213, SOX9 antisense RNA 1, humanhuman

TSL 5

Gene SOX9-AS1, Length 1,001 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-213ENST00000533996 ZNF543Q08ER8 600 aa10.83□□□□□ -0.68
SOX9-AS1-213ENST00000533996 BTG3Q14201 252 aaPredicted RBP10.83□□□□□ -0.68
SOX9-AS1-213ENST00000533996 HSDL1Q3SXM5 330 aa10.83□□□□□ -0.68
SOX9-AS1-213ENST00000533996 CELF3Q5SZQ8 465 aaKnown RBP10.83□□□□□ -0.68
SOX9-AS1-213ENST00000533996 UBALD2Q8IYN6 164 aa10.83□□□□□ -0.68
SOX9-AS1-213ENST00000533996 SPPL3Q8TCT6 385 aa10.83□□□□□ -0.68
SOX9-AS1-213ENST00000533996 SUSD6Q92537 303 aa10.83□□□□□ -0.68
SOX9-AS1-213ENST00000533996 RPGRIP1Q96KN7 1286 aa10.83□□□□□ -0.68
SOX9-AS1-213ENST00000533996 SPATA33Q96N06 139 aa10.83□□□□□ -0.68
SOX9-AS1-213ENST00000533996 HS3ST6Q96QI5 342 aa10.83□□□□□ -0.68
SOX9-AS1-213ENST00000533996 RNPEPQ9H4A4 650 aa10.83□□□□□ -0.68
SOX9-AS1-213ENST00000533996 INCENPQ9NQS7 918 aa10.83□□□□□ -0.68
SOX9-AS1-213ENST00000533996 ZBTB40Q9NUA8 1239 aa10.83□□□□□ -0.68
SOX9-AS1-213ENST00000533996 MAP3K20Q9NYL2 800 aaKnown RBP10.83□□□□□ -0.68
SOX9-AS1-213ENST00000533996 DDX19BQ9UMR2 479 aa10.83□□□□□ -0.68
SOX9-AS1-213ENST00000533996 USP15Q9Y4E8 981 aaPredicted RBP10.83□□□□□ -0.68
SOX9-AS1-213ENST00000533996 TTC3P53804 2025 aa10.83□□□□□ -0.68
SOX9-AS1-213ENST00000533996 MYH6P13533 1939 aa10.83□□□□□ -0.68
SOX9-AS1-213ENST00000533996 KIAA1671Q9BY89 1806 aa10.82□□□□□ -0.68
SOX9-AS1-213ENST00000533996 C3orf80F5H4A9 247 aa10.82□□□□□ -0.68
SOX9-AS1-213ENST00000533996 ENPP3O14638 875 aa10.82□□□□□ -0.68
SOX9-AS1-213ENST00000533996 KDM4AO75164 1064 aa10.82□□□□□ -0.68
SOX9-AS1-213ENST00000533996 DGKIO75912 1065 aa10.82□□□□□ -0.68
SOX9-AS1-213ENST00000533996 NR3C2P08235 984 aa10.82□□□□□ -0.68
SOX9-AS1-213ENST00000533996 HSPD1P10809 573 aaKnown RBP10.82□□□□□ -0.68
SOX9-AS1-213ENST00000533996 CTDSPL2Q05D32 466 aa10.82□□□□□ -0.68
SOX9-AS1-213ENST00000533996 USH1GQ495M9 461 aa10.82□□□□□ -0.68
SOX9-AS1-213ENST00000533996 DMRTA1Q5VZB9 504 aa10.82□□□□□ -0.68
SOX9-AS1-213ENST00000533996 SAMD3Q8N6K7 520 aa10.82□□□□□ -0.68
SOX9-AS1-213ENST00000533996 TBC1D5Q92609 795 aa10.82□□□□□ -0.68
SOX9-AS1-213ENST00000533996 NKD2Q969F2 451 aaPredicted RBP10.82□□□□□ -0.68
SOX9-AS1-213ENST00000533996 SEC62Q99442 399 aaKnown RBP10.82□□□□□ -0.68
SOX9-AS1-213ENST00000533996 CDCA3Q99618 268 aaPredicted RBP10.82□□□□□ -0.68
SOX9-AS1-213ENST00000533996 USP26Q9BXU7 913 aa10.82□□□□□ -0.68
SOX9-AS1-213ENST00000533996 TMEM134Q9H6X4 195 aa10.82□□□□□ -0.68
SOX9-AS1-213ENST00000533996 COL20A1Q9P218 1284 aa10.82□□□□□ -0.68
SOX9-AS1-213ENST00000533996 MRPL11Q9Y3B7 192 aaKnown RBP10.82□□□□□ -0.68
SOX9-AS1-213ENST00000533996 KAT6AQ92794 2004 aa10.82□□□□□ -0.68
SOX9-AS1-213ENST00000533996 SMAPO00193 183 aa10.81□□□□□ -0.68
SOX9-AS1-213ENST00000533996 GLP2RO95838 553 aa10.81□□□□□ -0.68
SOX9-AS1-213ENST00000533996 ITGB1P05556 798 aa10.81□□□□□ -0.68
SOX9-AS1-213ENST00000533996 SMIM10L2AP0DMW4 78 aa10.81□□□□□ -0.68
SOX9-AS1-213ENST00000533996 SMIM10L2BP0DMW5 78 aa10.81□□□□□ -0.68
SOX9-AS1-213ENST00000533996 ZMYM1Q5SVZ6 1142 aa10.81□□□□□ -0.68
SOX9-AS1-213ENST00000533996 CMTR2Q8IYT2 770 aaKnown RBP10.81□□□□□ -0.68
SOX9-AS1-213ENST00000533996 PANK1Q8TE04 598 aa10.81□□□□□ -0.68
SOX9-AS1-213ENST00000533996 ATP8B4Q8TF62 1192 aa10.81□□□□□ -0.68
SOX9-AS1-213ENST00000533996 POF1BQ8WVV4 589 aa10.81□□□□□ -0.68
SOX9-AS1-213ENST00000533996 OSBPL7Q9BZF2 842 aa10.81□□□□□ -0.68
SOX9-AS1-213ENST00000533996 EHMT1Q9H9B1 1298 aa10.81□□□□□ -0.68
SOX9-AS1-213ENST00000533996 PXMP2Q9NR77 195 aa10.81□□□□□ -0.68
SOX9-AS1-213ENST00000533996 PTPRZ1P23471 2315 aaPredicted RBP10.8□□□□□ -0.68
SOX9-AS1-213ENST00000533996 CACNA1HO95180 2353 aa10.8□□□□□ -0.68
SOX9-AS1-213ENST00000533996 GGPS1O95749 300 aa10.8□□□□□ -0.68
SOX9-AS1-213ENST00000533996 CTSHP09668 335 aa10.8□□□□□ -0.68
SOX9-AS1-213ENST00000533996 EIF2AK2P19525 551 aaKnown RBP10.8□□□□□ -0.68
SOX9-AS1-213ENST00000533996 DNAJB1P25685 340 aa10.8□□□□□ -0.68
SOX9-AS1-213ENST00000533996 NRIP1P48552 1158 aa10.8□□□□□ -0.68
SOX9-AS1-213ENST00000533996 ADAM17P78536 824 aa10.8□□□□□ -0.68
SOX9-AS1-213ENST00000533996 GHRHRQ02643 423 aa10.8□□□□□ -0.68
SOX9-AS1-213ENST00000533996 UBE3AQ05086 875 aa10.8□□□□□ -0.68
SOX9-AS1-213ENST00000533996 ALX1Q15699 326 aa10.8□□□□□ -0.68
SOX9-AS1-213ENST00000533996 PDE12Q6L8Q7 609 aaKnown RBP10.8□□□□□ -0.68
SOX9-AS1-213ENST00000533996 TMEM184AQ6ZMB5 413 aa10.8□□□□□ -0.68
SOX9-AS1-213ENST00000533996 FAM43BQ6ZT52 329 aaPredicted RBP10.8□□□□□ -0.68
SOX9-AS1-213ENST00000533996 ADGRD2Q7Z7M1 963 aa10.8□□□□□ -0.68
SOX9-AS1-213ENST00000533996 ZBTB33Q86T24 672 aa10.8□□□□□ -0.68
SOX9-AS1-213ENST00000533996 ADSSL1Q8N142 457 aa10.8□□□□□ -0.68
SOX9-AS1-213ENST00000533996 NEK1Q96PY6 1258 aa10.8□□□□□ -0.68
SOX9-AS1-213ENST00000533996 TLE6Q9H808 572 aa10.8□□□□□ -0.68
SOX9-AS1-213ENST00000533996 MLXIPQ9HAP2 919 aa10.8□□□□□ -0.68
SOX9-AS1-213ENST00000533996 BARX2Q9UMQ3 279 aaPredicted RBP10.8□□□□□ -0.68
SOX9-AS1-213ENST00000533996 NR2E1Q9Y466 385 aa10.8□□□□□ -0.68
SOX9-AS1-213ENST00000533996 PLXNA4Q9HCM2 1894 aa10.8□□□□□ -0.68
SOX9-AS1-213ENST00000533996 RGS20O76081 388 aa10.79□□□□□ -0.68
SOX9-AS1-213ENST00000533996 LGALS2P05162 132 aa10.79□□□□□ -0.68
SOX9-AS1-213ENST00000533996 RPLP2P05387 115 aaKnown RBP10.79□□□□□ -0.68
SOX9-AS1-213ENST00000533996 SRGAP2BP0DMP2 458 aa10.79□□□□□ -0.68
SOX9-AS1-213ENST00000533996 PCP11498 1178 aaKnown RBP10.79□□□□□ -0.68
SOX9-AS1-213ENST00000533996 NT5C2P49902 561 aa10.79□□□□□ -0.68
SOX9-AS1-213ENST00000533996 CLCN5P51795 746 aa10.79□□□□□ -0.68
SOX9-AS1-213ENST00000533996 CDC37Q16543 378 aaPredicted RBP10.79□□□□□ -0.68
SOX9-AS1-213ENST00000533996 STOX1Q6ZVD7 989 aa10.79□□□□□ -0.68
SOX9-AS1-213ENST00000533996 VSIG10LQ86VR7 867 aa10.79□□□□□ -0.68
SOX9-AS1-213ENST00000533996 CRIPAKQ8N1N5 446 aa10.79□□□□□ -0.68
SOX9-AS1-213ENST00000533996 KLHL23Q8NBE8 558 aa10.79□□□□□ -0.68
SOX9-AS1-213ENST00000533996 FTHL17Q9BXU8 183 aa10.79□□□□□ -0.68
SOX9-AS1-213ENST00000533996 SORCS3Q9UPU3 1222 aa10.79□□□□□ -0.68
SOX9-AS1-213ENST00000533996 VPS9D1Q9Y2B5 631 aa10.79□□□□□ -0.68
SOX9-AS1-213ENST00000533996 SQORQ9Y6N5 450 aa10.79□□□□□ -0.68
SOX9-AS1-213ENST00000533996 TTC41PQ6P2S7 1318 aa10.79□□□□□ -0.68
SOX9-AS1-213ENST00000533996 CCDC171Q6TFL3 1326 aa10.79□□□□□ -0.68
SOX9-AS1-213ENST00000533996 NRCAMQ92823 1304 aa10.79□□□□□ -0.68
SOX9-AS1-213ENST00000533996 VPS13AQ96RL7 3174 aa10.79□□□□□ -0.68
SOX9-AS1-213ENST00000533996 TK2O00142 265 aa10.78□□□□□ -0.68
SOX9-AS1-213ENST00000533996 FOXP2O15409 715 aa10.78□□□□□ -0.68
SOX9-AS1-213ENST00000533996 SMARCA5O60264 1052 aaPredicted RBP10.78□□□□□ -0.68
SOX9-AS1-213ENST00000533996 PDGFBP01127 241 aaPredicted RBP10.78□□□□□ -0.68
SOX9-AS1-213ENST00000533996 CHRNA1P02708 482 aa10.78□□□□□ -0.68
SOX9-AS1-213ENST00000533996 STAG3L1P0CL83 205 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms