RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 SLC9A2Q9UBY0 812 aa12.92□□□□□ -0.34
CLCF1-202ENST00000533438 RAPGEFL1Q9UHV5 662 aa12.92□□□□□ -0.34
CLCF1-202ENST00000533438 CCDC196A0A1B0GTZ2 297 aa12.91□□□□□ -0.34
CLCF1-202ENST00000533438 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.91□□□□□ -0.34
CLCF1-202ENST00000533438 LINC01553A4QN01 128 aa12.91□□□□□ -0.34
CLCF1-202ENST00000533438 GTPBP6O43824 516 aaPredicted RBP12.91□□□□□ -0.34
CLCF1-202ENST00000533438 ARP10275 920 aa12.91□□□□□ -0.34
CLCF1-202ENST00000533438 RPS6KB1P23443 525 aa12.91□□□□□ -0.34
CLCF1-202ENST00000533438 MARK3P27448 753 aa12.91□□□□□ -0.34
CLCF1-202ENST00000533438 HTRA4P83105 476 aaPredicted RBP12.91□□□□□ -0.34
CLCF1-202ENST00000533438 FGD1P98174 961 aa12.91□□□□□ -0.34
CLCF1-202ENST00000533438 MGAT3Q09327 533 aa12.91□□□□□ -0.34
CLCF1-202ENST00000533438 PPFIA1Q13136 1202 aa12.91□□□□□ -0.34
CLCF1-202ENST00000533438 GRB10Q13322 594 aa12.91□□□□□ -0.34
CLCF1-202ENST00000533438 CEP55Q53EZ4 464 aa12.91□□□□□ -0.34
CLCF1-202ENST00000533438 MARCH8Q5T0T0 291 aa12.91□□□□□ -0.34
CLCF1-202ENST00000533438 KRT40Q6A162 431 aa12.91□□□□□ -0.34
CLCF1-202ENST00000533438 TAF2Q6P1X5 1199 aa12.91□□□□□ -0.34
CLCF1-202ENST00000533438 BLOC1S2Q6QNY1 142 aa12.91□□□□□ -0.34
CLCF1-202ENST00000533438 RUFY4Q6ZNE9 571 aa12.91□□□□□ -0.34
CLCF1-202ENST00000533438 MICALL1Q8N3F8 863 aa12.91□□□□□ -0.34
CLCF1-202ENST00000533438 CRYGNQ8WXF5 182 aa12.91□□□□□ -0.34
CLCF1-202ENST00000533438 SEPT8Q92599 483 aa12.91□□□□□ -0.34
CLCF1-202ENST00000533438 INSL6Q9Y581 213 aa12.91□□□□□ -0.34
CLCF1-202ENST00000533438 WDR81Q562E7 1941 aa12.91□□□□□ -0.34
CLCF1-202ENST00000533438 RALGAPA2Q2PPJ7 1873 aa12.91□□□□□ -0.34
CLCF1-202ENST00000533438 ESYT2A0FGR8 921 aa12.9□□□□□ -0.34
CLCF1-202ENST00000533438 MEIS1O00470 390 aa12.9□□□□□ -0.34
CLCF1-202ENST00000533438 EPB41L2O43491 1005 aaKnown RBP12.9□□□□□ -0.34
CLCF1-202ENST00000533438 REC8O95072 547 aa12.9□□□□□ -0.34
CLCF1-202ENST00000533438 ATG7O95352 703 aa12.9□□□□□ -0.34
CLCF1-202ENST00000533438 CHRNA1P02708 482 aa12.9□□□□□ -0.34
CLCF1-202ENST00000533438 AMHP03971 560 aa12.9□□□□□ -0.34
CLCF1-202ENST00000533438 SCG2P13521 617 aa12.9□□□□□ -0.34
CLCF1-202ENST00000533438 ACTR2P61160 394 aa12.9□□□□□ -0.34
CLCF1-202ENST00000533438 ERVK-21P61565 698 aa12.9□□□□□ -0.34
CLCF1-202ENST00000533438 TFF2Q03403 129 aa12.9□□□□□ -0.34
CLCF1-202ENST00000533438 ITGB3BPQ13352 177 aaPredicted RBP12.9□□□□□ -0.34
CLCF1-202ENST00000533438 GRIK4Q16099 956 aa12.9□□□□□ -0.34
CLCF1-202ENST00000533438 PKN1Q16512 942 aa12.9□□□□□ -0.34
CLCF1-202ENST00000533438 FAM117BQ6P1L5 589 aa12.9□□□□□ -0.34
CLCF1-202ENST00000533438 NIPA1Q7RTP0 329 aa12.9□□□□□ -0.34
CLCF1-202ENST00000533438 MYOCDQ8IZQ8 938 aa12.9□□□□□ -0.34
CLCF1-202ENST00000533438 SP7Q8TDD2 431 aaPredicted RBP12.9□□□□□ -0.34
CLCF1-202ENST00000533438 APBB2Q92870 758 aa12.9□□□□□ -0.34
CLCF1-202ENST00000533438 GLG1Q92896 1179 aa12.9□□□□□ -0.34
CLCF1-202ENST00000533438 TOP1MTQ969P6 601 aa12.9□□□□□ -0.34
CLCF1-202ENST00000533438 FAM122AQ96E09 287 aa12.9□□□□□ -0.34
CLCF1-202ENST00000533438 TGS1Q96RS0 853 aaKnown RBP12.9□□□□□ -0.34
CLCF1-202ENST00000533438 ZMYND12Q9H0C1 365 aa12.9□□□□□ -0.34
CLCF1-202ENST00000533438 AGO4Q9HCK5 861 aaKnown RBP12.9□□□□□ -0.34
CLCF1-202ENST00000533438 LMCD1Q9NZU5 365 aa12.9□□□□□ -0.34
CLCF1-202ENST00000533438 TUBE1Q9UJT0 475 aa12.9□□□□□ -0.34
CLCF1-202ENST00000533438 NAP1L2Q9ULW6 460 aaPredicted RBP12.9□□□□□ -0.34
CLCF1-202ENST00000533438 IGKV6D-21A0A0A0MT36 114 aa12.89□□□□□ -0.35
CLCF1-202ENST00000533438 ADAMTS3O15072 1205 aa12.89□□□□□ -0.35
CLCF1-202ENST00000533438 PRPF3O43395 683 aaKnown RBP12.89□□□□□ -0.35
CLCF1-202ENST00000533438 GPR37L1O60883 481 aa12.89□□□□□ -0.35
CLCF1-202ENST00000533438 CYP3A4P08684 503 aa12.89□□□□□ -0.35
CLCF1-202ENST00000533438 EVCP57679 992 aa12.89□□□□□ -0.35
CLCF1-202ENST00000533438 NTRK3Q16288 839 aa12.89□□□□□ -0.35
CLCF1-202ENST00000533438 PLPPR4Q7Z2D5 763 aa12.89□□□□□ -0.35
CLCF1-202ENST00000533438 IL27Q8NEV9 243 aa12.89□□□□□ -0.35
CLCF1-202ENST00000533438 GDPD5Q8WTR4 605 aa12.89□□□□□ -0.35
CLCF1-202ENST00000533438 SDF4Q9BRK5 362 aa12.89□□□□□ -0.35
CLCF1-202ENST00000533438 IFIH1Q9BYX4 1025 aaKnown RBP12.89□□□□□ -0.35
CLCF1-202ENST00000533438 AZI2Q9H6S1 392 aa12.89□□□□□ -0.35
CLCF1-202ENST00000533438 SUGCTQ9HAC7 445 aa12.89□□□□□ -0.35
CLCF1-202ENST00000533438 MYH9P35579 1960 aaKnown RBP12.89□□□□□ -0.35
CLCF1-202ENST00000533438 TCF20Q9UGU0 1960 aaKnown RBP12.89□□□□□ -0.35
CLCF1-202ENST00000533438 ATG2AQ2TAZ0 1938 aa12.88□□□□□ -0.35
CLCF1-202ENST00000533438 IGLV3-22A0A075B6J6 115 aa12.88□□□□□ -0.35
CLCF1-202ENST00000533438 RRN3P2A6NIE6 340 aa12.88□□□□□ -0.35
CLCF1-202ENST00000533438 FAM86B1E9PN63 330 aa12.88□□□□□ -0.35
CLCF1-202ENST00000533438 SEC24BO95487 1268 aa12.88□□□□□ -0.35
CLCF1-202ENST00000533438 FAM86B2P0C5J1 330 aa12.88□□□□□ -0.35
CLCF1-202ENST00000533438 INSRRP14616 1297 aa12.88□□□□□ -0.35
CLCF1-202ENST00000533438 PSMA5P28066 241 aa12.88□□□□□ -0.35
CLCF1-202ENST00000533438 KCNQ1P51787 676 aa12.88□□□□□ -0.35
CLCF1-202ENST00000533438 PLCB4Q15147 1175 aa12.88□□□□□ -0.35
CLCF1-202ENST00000533438 JAKMIP3Q5VZ66 844 aa12.88□□□□□ -0.35
CLCF1-202ENST00000533438 DNAJB3Q8WWF6 145 aa12.88□□□□□ -0.35
CLCF1-202ENST00000533438 PHKBQ93100 1093 aa12.88□□□□□ -0.35
CLCF1-202ENST00000533438 LRFN3Q9BTN0 628 aa12.88□□□□□ -0.35
CLCF1-202ENST00000533438 RNF26Q9BY78 433 aaPredicted RBP12.88□□□□□ -0.35
CLCF1-202ENST00000533438 DHX15O43143 795 aaKnown RBP12.87□□□□□ -0.35
CLCF1-202ENST00000533438 CCNE2O96020 404 aa12.87□□□□□ -0.35
CLCF1-202ENST00000533438 RPLP2P05387 115 aaKnown RBP12.87□□□□□ -0.35
CLCF1-202ENST00000533438 GHRP10912 638 aa12.87□□□□□ -0.35
CLCF1-202ENST00000533438 IFNAR1P17181 557 aa12.87□□□□□ -0.35
CLCF1-202ENST00000533438 PDIA3P30101 505 aaKnown RBP12.87□□□□□ -0.35
CLCF1-202ENST00000533438 STAT5BP51692 787 aa12.87□□□□□ -0.35
CLCF1-202ENST00000533438 IGBP1P78318 339 aa12.87□□□□□ -0.35
CLCF1-202ENST00000533438 TOB2Q14106 344 aaPredicted RBP12.87□□□□□ -0.35
CLCF1-202ENST00000533438 LPIN1Q14693 890 aa12.87□□□□□ -0.35
CLCF1-202ENST00000533438 FBXO47Q5MNV8 452 aa12.87□□□□□ -0.35
CLCF1-202ENST00000533438 MCTP2Q6DN12 878 aa12.87□□□□□ -0.35
CLCF1-202ENST00000533438 ABHD15Q6UXT9 468 aa12.87□□□□□ -0.35
CLCF1-202ENST00000533438 RSPH3Q86UC2 560 aa12.87□□□□□ -0.35
CLCF1-202ENST00000533438 PLA2G4DQ86XP0 818 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms