RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 RRN3P2A6NIE6 340 aa18.89■□□□□ 0.61
PKP3-209ENST00000533069 DHX15O43143 795 aaKnown RBP18.89■□□□□ 0.61
PKP3-209ENST00000533069 CCNE2O96020 404 aa18.89■□□□□ 0.61
PKP3-209ENST00000533069 RPLP2P05387 115 aaKnown RBP18.89■□□□□ 0.61
PKP3-209ENST00000533069 STAT5BP51692 787 aa18.89■□□□□ 0.61
PKP3-209ENST00000533069 NEK4P51957 841 aa18.89■□□□□ 0.61
PKP3-209ENST00000533069 MBTPS1Q14703 1052 aa18.89■□□□□ 0.61
PKP3-209ENST00000533069 RABEP1Q15276 862 aa18.89■□□□□ 0.61
PKP3-209ENST00000533069 PRR16Q569H4 304 aa18.89■□□□□ 0.61
PKP3-209ENST00000533069 RPAINQ86UA6 219 aa18.89■□□□□ 0.61
PKP3-209ENST00000533069 WASF1Q92558 559 aa18.89■□□□□ 0.61
PKP3-209ENST00000533069 TUBE1Q9UJT0 475 aa18.89■□□□□ 0.61
PKP3-209ENST00000533069 IGKV6D-21A0A0A0MT36 114 aa18.88■□□□□ 0.61
PKP3-209ENST00000533069 ABHD14A-ACY1A0A1B0GW23 586 aa18.88■□□□□ 0.61
PKP3-209ENST00000533069 MBLAC1A4D2B0 266 aaPredicted RBP18.88■□□□□ 0.61
PKP3-209ENST00000533069 DDX39AO00148 427 aaKnown RBP18.88■□□□□ 0.61
PKP3-209ENST00000533069 KRT76Q01546 638 aa18.88■□□□□ 0.61
PKP3-209ENST00000533069 FAM160B1Q5W0V3 765 aa18.88■□□□□ 0.61
PKP3-209ENST00000533069 ZNF746Q6NUN9 644 aaPredicted RBP18.88■□□□□ 0.61
PKP3-209ENST00000533069 MIS18BP1Q6P0N0 1132 aa18.88■□□□□ 0.61
PKP3-209ENST00000533069 ABHD15Q6UXT9 468 aa18.88■□□□□ 0.61
PKP3-209ENST00000533069 RSPH3Q86UC2 560 aa18.88■□□□□ 0.61
PKP3-209ENST00000533069 SMAP1Q8IYB5 467 aaPredicted RBP18.88■□□□□ 0.61
PKP3-209ENST00000533069 GTF3C6Q969F1 213 aa18.88■□□□□ 0.61
PKP3-209ENST00000533069 LENG9Q96B70 501 aa18.88■□□□□ 0.61
PKP3-209ENST00000533069 AIFM3Q96NN9 605 aa18.88■□□□□ 0.61
PKP3-209ENST00000533069 SLC28A3Q9HAS3 691 aa18.88■□□□□ 0.61
PKP3-209ENST00000533069 TRPC6Q9Y210 931 aa18.88■□□□□ 0.61
PKP3-209ENST00000533069 M0R2N6 131 aa18.87■□□□□ 0.61
PKP3-209ENST00000533069 BACH1O14867 736 aa18.87■□□□□ 0.61
PKP3-209ENST00000533069 INSRRP14616 1297 aa18.87■□□□□ 0.61
PKP3-209ENST00000533069 WDR5P61964 334 aaKnown RBP18.87■□□□□ 0.61
PKP3-209ENST00000533069 IKBKEQ14164 716 aa18.87■□□□□ 0.61
PKP3-209ENST00000533069 PLCB4Q15147 1175 aa18.87■□□□□ 0.61
PKP3-209ENST00000533069 NPY5RQ15761 445 aa18.87■□□□□ 0.61
PKP3-209ENST00000533069 ME3Q16798 604 aa18.87■□□□□ 0.61
PKP3-209ENST00000533069 FAM26DQ5JW98 314 aa18.87■□□□□ 0.61
PKP3-209ENST00000533069 KRT25Q7Z3Z0 450 aa18.87■□□□□ 0.61
PKP3-209ENST00000533069 HERC6Q8IVU3 1022 aa18.87■□□□□ 0.61
PKP3-209ENST00000533069 TBCKQ8TEA7 893 aa18.87■□□□□ 0.61
PKP3-209ENST00000533069 PHF20Q9BVI0 1012 aa18.87■□□□□ 0.61
PKP3-209ENST00000533069 YBX2Q9Y2T7 364 aaKnown RBP18.87■□□□□ 0.61
PKP3-209ENST00000533069 DOCK5Q9H7D0 1870 aa18.86■□□□□ 0.61
PKP3-209ENST00000533069 KIF28PB7ZC32 967 aa18.86■□□□□ 0.61
PKP3-209ENST00000533069 CTDNEP1O95476 244 aa18.86■□□□□ 0.61
PKP3-209ENST00000533069 CTSHP09668 335 aa18.86■□□□□ 0.61
PKP3-209ENST00000533069 ANP32AP39687 249 aaKnown RBP18.86■□□□□ 0.61
PKP3-209ENST00000533069 RABGGTBP53611 331 aa18.86■□□□□ 0.61
PKP3-209ENST00000533069 GRIN2CQ14957 1233 aa18.86■□□□□ 0.61
PKP3-209ENST00000533069 NONOQ15233 471 aaKnown RBP eCLIP18.86■□□□□ 0.613e-6■■□□□ 12.2
PKP3-209ENST00000533069 MARCH8Q5T0T0 291 aa18.86■□□□□ 0.61
PKP3-209ENST00000533069 MOXD1Q6UVY6 613 aa18.86■□□□□ 0.61
PKP3-209ENST00000533069 RIT2Q99578 217 aa18.86■□□□□ 0.61
PKP3-209ENST00000533069 NKX2-4Q9H2Z4 354 aa18.86■□□□□ 0.61
PKP3-209ENST00000533069 ORC3Q9UBD5 711 aaPredicted RBP18.86■□□□□ 0.61
PKP3-209ENST00000533069 POTEB3A0JP26 581 aa18.85■□□□□ 0.61
PKP3-209ENST00000533069 PSAPP07602 524 aa18.85■□□□□ 0.61
PKP3-209ENST00000533069 FOSL2P15408 326 aa18.85■□□□□ 0.61
PKP3-209ENST00000533069 IGBP1P78318 339 aa18.85■□□□□ 0.61
PKP3-209ENST00000533069 Q4G0T1 1027 aa18.85■□□□□ 0.61
PKP3-209ENST00000533069 PLEKHG4Q58EX7 1191 aa18.85■□□□□ 0.61
PKP3-209ENST00000533069 POTEBQ6S5H4 581 aa18.85■□□□□ 0.61
PKP3-209ENST00000533069 RUFY4Q6ZNE9 571 aa18.85■□□□□ 0.61
PKP3-209ENST00000533069 CCDC60Q8IWA6 550 aaPredicted RBP18.85■□□□□ 0.61
PKP3-209ENST00000533069 MYLIPQ8WY64 445 aa18.85■□□□□ 0.61
PKP3-209ENST00000533069 SEPT8Q92599 483 aa18.85■□□□□ 0.61
PKP3-209ENST00000533069 ZNF302Q9NR11 478 aa18.85■□□□□ 0.61
PKP3-209ENST00000533069 KCNJ14Q9UNX9 436 aa18.85■□□□□ 0.61
PKP3-209ENST00000533069 PCDHA10Q9Y5I2 948 aa18.85■□□□□ 0.61
PKP3-209ENST00000533069 SCN5AQ14524 2016 aa18.84■□□□□ 0.61
PKP3-209ENST00000533069 CYP3A7-CYP3A51PA0A087WV96 503 aa18.84■□□□□ 0.61
PKP3-209ENST00000533069 CCDC194A0A1B0GVG4 234 aa18.84■□□□□ 0.61
PKP3-209ENST00000533069 MSH4O15457 936 aa18.84■□□□□ 0.61
PKP3-209ENST00000533069 EDIL3O43854 480 aa18.84■□□□□ 0.61
PKP3-209ENST00000533069 HBP1O60381 514 aa18.84■□□□□ 0.61
PKP3-209ENST00000533069 CYP3A7P24462 503 aa18.84■□□□□ 0.61
PKP3-209ENST00000533069 PPP2R2DQ66LE6 453 aa18.84■□□□□ 0.61
PKP3-209ENST00000533069 PDXDC2PQ6P474 469 aa18.84■□□□□ 0.61
PKP3-209ENST00000533069 NECAB1Q8N987 351 aa18.84■□□□□ 0.61
PKP3-209ENST00000533069 DBF4BQ8NFT6 615 aa18.84■□□□□ 0.61
PKP3-209ENST00000533069 ATP8B4Q8TF62 1192 aa18.84■□□□□ 0.61
PKP3-209ENST00000533069 APBB2Q92870 758 aa18.84■□□□□ 0.61
PKP3-209ENST00000533069 SLC5A5Q92911 643 aa18.84■□□□□ 0.61
PKP3-209ENST00000533069 CHD9Q3L8U1 2897 aa18.83■□□□□ 0.61
PKP3-209ENST00000533069 COL1A2P08123 1366 aa18.83■□□□□ 0.61
PKP3-209ENST00000533069 WDR64B1ANS9 1081 aa18.83■□□□□ 0.6
PKP3-209ENST00000533069 ST18O60284 1047 aa18.83■□□□□ 0.6
PKP3-209ENST00000533069 GAS7O60861 476 aa18.83■□□□□ 0.6
PKP3-209ENST00000533069 LARGE1O95461 756 aa18.83■□□□□ 0.6
PKP3-209ENST00000533069 TCTN1Q2MV58 587 aa18.83■□□□□ 0.6
PKP3-209ENST00000533069 LRCH2Q5VUJ6 765 aa18.83■□□□□ 0.6
PKP3-209ENST00000533069 SWSAP1Q6NVH7 229 aa18.83■□□□□ 0.6
PKP3-209ENST00000533069 MBOAT7Q96N66 472 aa18.83■□□□□ 0.6
PKP3-209ENST00000533069 UIMC1Q96RL1 719 aa18.83■□□□□ 0.6
PKP3-209ENST00000533069 TEKT3Q9BXF9 490 aa18.83■□□□□ 0.6
PKP3-209ENST00000533069 RBM19Q9Y4C8 960 aaKnown RBP18.83■□□□□ 0.6
PKP3-209ENST00000533069 SAMM50Q9Y512 469 aa18.83■□□□□ 0.6
PKP3-209ENST00000533069 PCDHA2Q9Y5H9 948 aa18.83■□□□□ 0.6
PKP3-209ENST00000533069 MAFBQ9Y5Q3 323 aaPredicted RBP18.83■□□□□ 0.6
PKP3-209ENST00000533069 TDP2O95551 362 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms