RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 RFX7Q2KHR2 1363 aa11.61□□□□□ -0.55
COLCA1-203ENST00000532918 SLC25A27O95847 323 aa11.61□□□□□ -0.55
COLCA1-203ENST00000532918 OR6B2Q6IFH4 312 aa11.61□□□□□ -0.55
COLCA1-203ENST00000532918 OR6B3Q8NGW1 331 aa11.61□□□□□ -0.55
COLCA1-203ENST00000532918 PPP4R1Q8TF05 950 aa11.61□□□□□ -0.55
COLCA1-203ENST00000532918 CLIC6Q96NY7 704 aa11.61□□□□□ -0.55
COLCA1-203ENST00000532918 PLA2G12BQ9BX93 195 aa11.61□□□□□ -0.55
COLCA1-203ENST00000532918 MTFR1LQ9H019 292 aa11.61□□□□□ -0.55
COLCA1-203ENST00000532918 F5H6K3 240 aa11.61□□□□□ -0.55
COLCA1-203ENST00000532918 IGKV5-2P06315 115 aa11.61□□□□□ -0.55
COLCA1-203ENST00000532918 INPP5BP32019 993 aa11.61□□□□□ -0.55
COLCA1-203ENST00000532918 NNMTP40261 264 aa11.61□□□□□ -0.55
COLCA1-203ENST00000532918 KLRC3Q07444 240 aa11.61□□□□□ -0.55
COLCA1-203ENST00000532918 MAN2A1Q16706 1144 aa11.61□□□□□ -0.55
COLCA1-203ENST00000532918 TTBK2Q6IQ55 1244 aa11.61□□□□□ -0.55
COLCA1-203ENST00000532918 DNAJC24Q6P3W2 148 aa11.61□□□□□ -0.55
COLCA1-203ENST00000532918 NSUN7Q8NE18 718 aaKnown RBP11.61□□□□□ -0.55
COLCA1-203ENST00000532918 LCMT1Q9UIC8 334 aa11.61□□□□□ -0.55
COLCA1-203ENST00000532918 HYOU1Q9Y4L1 999 aa11.61□□□□□ -0.55
COLCA1-203ENST00000532918 WDR19Q8NEZ3 1342 aa11.61□□□□□ -0.55
COLCA1-203ENST00000532918 TTC36A6NLP5 189 aa11.61□□□□□ -0.55
COLCA1-203ENST00000532918 CLDN3O15551 220 aa11.61□□□□□ -0.55
COLCA1-203ENST00000532918 EPHB1P54762 984 aa11.61□□□□□ -0.55
COLCA1-203ENST00000532918 HMGCS2P54868 508 aa11.61□□□□□ -0.55
COLCA1-203ENST00000532918 SCARF1Q14162 830 aa11.61□□□□□ -0.55
COLCA1-203ENST00000532918 CTTNQ14247 550 aaKnown RBP11.61□□□□□ -0.55
COLCA1-203ENST00000532918 ZNF658Q5TYW1 1059 aaPredicted RBP11.61□□□□□ -0.55
COLCA1-203ENST00000532918 BZW1Q7L1Q6 419 aaKnown RBP11.61□□□□□ -0.55
COLCA1-203ENST00000532918 OR6J1Q8NGC5 347 aa11.61□□□□□ -0.55
COLCA1-203ENST00000532918 PCIF1Q9H4Z3 704 aa11.61□□□□□ -0.55
COLCA1-203ENST00000532918 CLIC4Q9Y696 253 aa11.61□□□□□ -0.55
COLCA1-203ENST00000532918 VEPH1Q14D04 833 aa11.6□□□□□ -0.55
COLCA1-203ENST00000532918 DENND2CQ68D51 928 aa11.6□□□□□ -0.55
COLCA1-203ENST00000532918 HHIPL2Q6UWX4 724 aa11.6□□□□□ -0.55
COLCA1-203ENST00000532918 SDCCAG8Q86SQ7 713 aaPredicted RBP11.6□□□□□ -0.55
COLCA1-203ENST00000532918 ZNF280CQ8ND82 737 aa11.6□□□□□ -0.55
COLCA1-203ENST00000532918 AGBL3Q8NEM8 1001 aa11.6□□□□□ -0.55
COLCA1-203ENST00000532918 CELF2O95319 508 aaKnown RBP11.6□□□□□ -0.55
COLCA1-203ENST00000532918 DPEP1P16444 411 aa11.6□□□□□ -0.55
COLCA1-203ENST00000532918 SNAP25P60880 206 aa11.6□□□□□ -0.55
COLCA1-203ENST00000532918 YAF2Q8IY57 180 aa11.6□□□□□ -0.55
COLCA1-203ENST00000532918 TGFB2P61812 414 aa11.6□□□□□ -0.55
COLCA1-203ENST00000532918 ALX1Q15699 326 aa11.6□□□□□ -0.55
COLCA1-203ENST00000532918 ANKRD13AQ8IZ07 590 aa11.6□□□□□ -0.55
COLCA1-203ENST00000532918 MARCH10Q8NA82 808 aaPredicted RBP11.6□□□□□ -0.55
COLCA1-203ENST00000532918 TUBGCP2Q9BSJ2 902 aa11.6□□□□□ -0.55
COLCA1-203ENST00000532918 AGLP35573 1532 aa11.6□□□□□ -0.55
COLCA1-203ENST00000532918 P4HBP07237 508 aaKnown RBP11.6□□□□□ -0.55
COLCA1-203ENST00000532918 SLFN14P0C7P3 912 aa11.6□□□□□ -0.55
COLCA1-203ENST00000532918 FCGRTP55899 365 aa11.6□□□□□ -0.55
COLCA1-203ENST00000532918 KIF23Q02241 960 aaPredicted RBP11.6□□□□□ -0.55
COLCA1-203ENST00000532918 GRM4Q14833 912 aa11.6□□□□□ -0.55
COLCA1-203ENST00000532918 FAM84BQ96KN1 310 aaPredicted RBP11.6□□□□□ -0.55
COLCA1-203ENST00000532918 ZNF148Q9UQR1 794 aa11.6□□□□□ -0.55
COLCA1-203ENST00000532918 TRPM1Q7Z4N2 1603 aa11.6□□□□□ -0.55
COLCA1-203ENST00000532918 CD163L1Q9NR16 1453 aa11.6□□□□□ -0.55
COLCA1-203ENST00000532918 COPB1P53618 953 aaKnown RBP11.59□□□□□ -0.55
COLCA1-203ENST00000532918 ANGEL2Q5VTE6 544 aaKnown RBP11.59□□□□□ -0.55
COLCA1-203ENST00000532918 RAB44Q7Z6P3 723 aaPredicted RBP11.59□□□□□ -0.55
COLCA1-203ENST00000532918 GGA3Q9NZ52 723 aa11.59□□□□□ -0.55
COLCA1-203ENST00000532918 CLTCL1P53675 1640 aa11.59□□□□□ -0.55
COLCA1-203ENST00000532918 KRIT1O00522 736 aa11.59□□□□□ -0.55
COLCA1-203ENST00000532918 KCNK3O14649 394 aa11.59□□□□□ -0.55
COLCA1-203ENST00000532918 MAPK4P31152 587 aa11.59□□□□□ -0.55
COLCA1-203ENST00000532918 PEX3P56589 373 aa11.59□□□□□ -0.55
COLCA1-203ENST00000532918 TRMT2AQ8IZ69 625 aaKnown RBP11.59□□□□□ -0.55
COLCA1-203ENST00000532918 PGBD4Q96DM1 585 aa11.59□□□□□ -0.55
COLCA1-203ENST00000532918 ERO1AQ96HE7 468 aa11.59□□□□□ -0.55
COLCA1-203ENST00000532918 TEX13BQ9BXU2 312 aa11.59□□□□□ -0.55
COLCA1-203ENST00000532918 RIMBP3CA6NJZ7 1639 aa11.59□□□□□ -0.55
COLCA1-203ENST00000532918 RIMBP3BA6NNM3 1639 aa11.59□□□□□ -0.55
COLCA1-203ENST00000532918 RIMBP3Q9UFD9 1639 aa11.59□□□□□ -0.55
COLCA1-203ENST00000532918 CROCC2H7BZ55 1655 aa11.59□□□□□ -0.55
COLCA1-203ENST00000532918 TRAPPC3O43617 180 aa11.59□□□□□ -0.55
COLCA1-203ENST00000532918 PRPSAP2O60256 369 aa11.59□□□□□ -0.55
COLCA1-203ENST00000532918 RBBP5Q15291 538 aaKnown RBP11.59□□□□□ -0.55
COLCA1-203ENST00000532918 RPAINQ86UA6 219 aa11.59□□□□□ -0.55
COLCA1-203ENST00000532918 TSC1Q92574 1164 aa11.59□□□□□ -0.55
COLCA1-203ENST00000532918 CEP95Q96GE4 821 aa11.59□□□□□ -0.55
COLCA1-203ENST00000532918 TRIM62Q9BVG3 475 aa11.59□□□□□ -0.55
COLCA1-203ENST00000532918 HAUS4Q9H6D7 363 aa11.59□□□□□ -0.55
COLCA1-203ENST00000532918 ZNF70Q9UC06 446 aaPredicted RBP11.59□□□□□ -0.55
COLCA1-203ENST00000532918 BCAP29Q9UHQ4 241 aa11.59□□□□□ -0.55
COLCA1-203ENST00000532918 FARP1Q9Y4F1 1045 aaPredicted RBP11.59□□□□□ -0.55
COLCA1-203ENST00000532918 CAMSAP1Q5T5Y3 1602 aa11.59□□□□□ -0.55
COLCA1-203ENST00000532918 ATF2P15336 505 aa11.59□□□□□ -0.55
COLCA1-203ENST00000532918 GMPSP49915 693 aaPredicted RBP11.59□□□□□ -0.55
COLCA1-203ENST00000532918 PSMC5P62195 406 aa11.59□□□□□ -0.55
COLCA1-203ENST00000532918 GABPB1Q06547 395 aaPredicted RBP11.59□□□□□ -0.55
COLCA1-203ENST00000532918 EZH2Q15910 746 aaKnown RBP11.59□□□□□ -0.55
COLCA1-203ENST00000532918 ZNF568Q3ZCX4 644 aa11.59□□□□□ -0.55
COLCA1-203ENST00000532918 THNSL1Q8IYQ7 743 aa11.59□□□□□ -0.55
COLCA1-203ENST00000532918 FAM151AQ8WW52 585 aa11.59□□□□□ -0.55
COLCA1-203ENST00000532918 ZNF653Q96CK0 615 aa11.59□□□□□ -0.55
COLCA1-203ENST00000532918 ANGPTL3Q9Y5C1 460 aa11.59□□□□□ -0.55
COLCA1-203ENST00000532918 SAR1BQ9Y6B6 198 aa11.59□□□□□ -0.55
COLCA1-203ENST00000532918 CCL15-CCL14A0A0B4J2E2 113 aa11.59□□□□□ -0.55
COLCA1-203ENST00000532918 CYP2D6P10635 497 aa11.59□□□□□ -0.55
COLCA1-203ENST00000532918 ACTN1P12814 892 aa11.59□□□□□ -0.55
COLCA1-203ENST00000532918 TCP1P17987 556 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms