RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 LMBR1LQ6UX01 489 aa5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 LAPTM4BQ86VI4 370 aa5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 NLRP13Q86W25 1043 aa5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 SLC44A2Q8IWA5 706 aaPredicted RBP5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 SYTL1Q8IYJ3 562 aa5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 NANOS1Q8WY41 292 aaKnown RBP5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 JADE3Q92613 823 aa5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 SLC5A5Q92911 643 aa5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 RRP36Q96EU6 259 aaKnown RBP5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 ZKSCAN3Q9BRR0 538 aa5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 SORBS1Q9BX66 1292 aaKnown RBP5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 STARD7Q9NQZ5 370 aa5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 TMEM39AQ9NV64 488 aa5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 TMEM51Q9NW97 253 aa5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 KCTD5Q9NXV2 234 aa5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 ITGB1BP2Q9UKP3 347 aa5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 ZKSCAN5Q9Y2L8 839 aa5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 ZNF711Q9Y462 761 aa5.91□□□□□ -1.46
ECHDC1-222ENST00000531967 BOLA2-SMG1P6H3BVE0 249 aa5.9□□□□□ -1.46
ECHDC1-222ENST00000531967 STXBP3O00186 592 aa5.9□□□□□ -1.46
ECHDC1-222ENST00000531967 ELL2O00472 640 aaPredicted RBP5.9□□□□□ -1.46
ECHDC1-222ENST00000531967 FFAR2O15552 330 aa5.9□□□□□ -1.46
ECHDC1-222ENST00000531967 AOC2O75106 756 aa5.9□□□□□ -1.46
ECHDC1-222ENST00000531967 SH3BP2P78314 561 aa5.9□□□□□ -1.46
ECHDC1-222ENST00000531967 UBXN1Q04323 297 aa5.9□□□□□ -1.46
ECHDC1-222ENST00000531967 PTPN11Q06124 597 aaPredicted RBP5.9□□□□□ -1.46
ECHDC1-222ENST00000531967 DHX9Q08211 1270 aaKnown RBP5.9□□□□□ -1.46
ECHDC1-222ENST00000531967 AP1B1Q10567 949 aa5.9□□□□□ -1.46
ECHDC1-222ENST00000531967 COX10Q12887 443 aa5.9□□□□□ -1.46
ECHDC1-222ENST00000531967 CLEC16AQ2KHT3 1053 aa5.9□□□□□ -1.46
ECHDC1-222ENST00000531967 KAZNQ674X7 775 aa5.9□□□□□ -1.46
ECHDC1-222ENST00000531967 APOA5Q6Q788 366 aa5.9□□□□□ -1.46
ECHDC1-222ENST00000531967 NPNTQ6UXI9 565 aa5.9□□□□□ -1.46
ECHDC1-222ENST00000531967 USP51Q70EK9 711 aa5.9□□□□□ -1.46
ECHDC1-222ENST00000531967 NCAPG2Q86XI2 1143 aa5.9□□□□□ -1.46
ECHDC1-222ENST00000531967 IQCF2Q8IXL9 164 aa5.9□□□□□ -1.46
ECHDC1-222ENST00000531967 MICALL1Q8N3F8 863 aa5.9□□□□□ -1.46
ECHDC1-222ENST00000531967 ZFRQ96KR1 1074 aaKnown RBP5.9□□□□□ -1.46
ECHDC1-222ENST00000531967 NLRP3Q96P20 1036 aa5.9□□□□□ -1.46
ECHDC1-222ENST00000531967 PI4K2AQ9BTU6 479 aa5.9□□□□□ -1.46
ECHDC1-222ENST00000531967 XAB2Q9HCS7 855 aaKnown RBP5.9□□□□□ -1.46
ECHDC1-222ENST00000531967 HOXC10Q9NYD6 342 aa5.9□□□□□ -1.46
ECHDC1-222ENST00000531967 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.9□□□□□ -1.46
ECHDC1-222ENST00000531967 APEX2Q9UBZ4 518 aa5.9□□□□□ -1.46
ECHDC1-222ENST00000531967 EIF2B4Q9UI10 523 aaKnown RBP5.9□□□□□ -1.46
ECHDC1-222ENST00000531967 PADI4Q9UM07 663 aa5.9□□□□□ -1.46
ECHDC1-222ENST00000531967 C19orf67A6NJJ6 358 aa5.9□□□□□ -1.47
ECHDC1-222ENST00000531967 METTL12A8MUP2 240 aa5.9□□□□□ -1.47
ECHDC1-222ENST00000531967 FAM25EA8MYX2 175 aa5.9□□□□□ -1.47
ECHDC1-222ENST00000531967 DLX3O60479 287 aa5.9□□□□□ -1.47
ECHDC1-222ENST00000531967 ALOX12P18054 663 aa5.9□□□□□ -1.47
ECHDC1-222ENST00000531967 PRPHP41219 470 aa5.9□□□□□ -1.47
ECHDC1-222ENST00000531967 SH3BGRP55822 239 aaPredicted RBP5.9□□□□□ -1.47
ECHDC1-222ENST00000531967 BECN1Q14457 450 aa5.9□□□□□ -1.47
ECHDC1-222ENST00000531967 SF3B3Q15393 1217 aaKnown RBP5.9□□□□□ -1.47
ECHDC1-222ENST00000531967 RPUSD3Q6P087 351 aaKnown RBP5.9□□□□□ -1.47
ECHDC1-222ENST00000531967 LLGL2Q6P1M3 1020 aa5.9□□□□□ -1.47
ECHDC1-222ENST00000531967 BTLAQ7Z6A9 289 aa5.9□□□□□ -1.47
ECHDC1-222ENST00000531967 CCAR2Q8N163 923 aaKnown RBP5.9□□□□□ -1.47
ECHDC1-222ENST00000531967 FAM13CQ8NE31 585 aa5.9□□□□□ -1.47
ECHDC1-222ENST00000531967 RUFY2Q8WXA3 655 aa5.9□□□□□ -1.47
ECHDC1-222ENST00000531967 LRTOMTQ8WZ04 291 aa5.9□□□□□ -1.47
ECHDC1-222ENST00000531967 ATP2A3Q93084 1043 aa5.9□□□□□ -1.47
ECHDC1-222ENST00000531967 PHKBQ93100 1093 aa5.9□□□□□ -1.47
ECHDC1-222ENST00000531967 C1GALT1C1Q96EU7 318 aa5.9□□□□□ -1.47
ECHDC1-222ENST00000531967 POLR3CQ9BUI4 534 aaPredicted RBP5.9□□□□□ -1.47
ECHDC1-222ENST00000531967 ARHGAP39Q9C0H5 1083 aa5.9□□□□□ -1.47
ECHDC1-222ENST00000531967 SIL1Q9H173 461 aa5.9□□□□□ -1.47
ECHDC1-222ENST00000531967 HAUS2Q9NVX0 235 aa5.9□□□□□ -1.47
ECHDC1-222ENST00000531967 ORC3Q9UBD5 711 aaPredicted RBP5.9□□□□□ -1.47
ECHDC1-222ENST00000531967 VPS28Q9UK41 221 aa5.9□□□□□ -1.47
ECHDC1-222ENST00000531967 FBXL5Q9UKA1 691 aa5.9□□□□□ -1.47
ECHDC1-222ENST00000531967 RIMBP2O15034 1052 aa5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 MGEA5O60502 916 aa5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 EPHX1P07099 455 aa5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 ADRB2P07550 413 aa5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 HOXB3P14651 431 aaPredicted RBP5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 ABCD1P33897 745 aa5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 GPR3P46089 330 aa5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 ZNF157P51786 506 aaPredicted RBP5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 KPNA1P52294 538 aaPredicted RBP5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 MRPL28Q13084 256 aaKnown RBP5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 CNN3Q15417 329 aaKnown RBP5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 INF2Q27J81 1249 aa5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 ZNF423Q2M1K9 1284 aa5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 ARL13BQ3SXY8 428 aa5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 MMEL1Q495T6 779 aa5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 RPS26P11Q5JNZ5 115 aaPredicted RBP5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 MAMDC2Q7Z304 686 aaPredicted RBP5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 SIAH1Q8IUQ4 282 aa5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 MVB12AQ96EY5 273 aa5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 UNKQ9C0B0 810 aaKnown RBP5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 RMI1Q9H9A7 625 aa5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 FAM86C1Q9NVL1 165 aa5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 POGKQ9P215 609 aa5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 PCDHGB5Q9Y5G0 923 aa5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 SCRIBQ14160 1630 aa5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 RB1CC1Q8TDY2 1594 aa5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 SLC22A31A6NKX4 558 aa5.89□□□□□ -1.47
ECHDC1-222ENST00000531967 CYP17A1P05093 508 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms