RNA–Protein interactions for RNA: ENST00000531546.1

CASP4-210, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 921 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-210ENST00000531546 DHX29Q7Z478 1369 aaKnown RBP7.42□□□□□ -1.22
CASP4-210ENST00000531546 SLIT1O75093 1534 aa7.42□□□□□ -1.22
CASP4-210ENST00000531546 GIPRP48546 466 aa7.41□□□□□ -1.22
CASP4-210ENST00000531546 GTF2A2P52657 109 aa7.41□□□□□ -1.22
CASP4-210ENST00000531546 C1QTNF8P60827 252 aa7.41□□□□□ -1.22
CASP4-210ENST00000531546 Q8N1Y9 231 aa7.41□□□□□ -1.22
CASP4-210ENST00000531546 IGDCC4Q8TDY8 1250 aa7.41□□□□□ -1.22
CASP4-210ENST00000531546 MBD6Q96DN6 1003 aa7.41□□□□□ -1.22
CASP4-210ENST00000531546 PPP1R1BQ9UD71 204 aaPredicted RBP7.41□□□□□ -1.22
CASP4-210ENST00000531546 ARHGAP23Q9P227 1491 aa7.41□□□□□ -1.22
CASP4-210ENST00000531546 ZBTB7CA1YPR0 619 aa7.4□□□□□ -1.22
CASP4-210ENST00000531546 SOX9P48436 509 aa7.4□□□□□ -1.22
CASP4-210ENST00000531546 BRINP3Q76B58 766 aa7.4□□□□□ -1.22
CASP4-210ENST00000531546 KBTBD2Q8IY47 623 aa7.4□□□□□ -1.22
CASP4-210ENST00000531546 BVESQ8NE79 360 aa7.4□□□□□ -1.22
CASP4-210ENST00000531546 ZSWIM3Q96MP5 696 aa7.4□□□□□ -1.22
CASP4-210ENST00000531546 GINM1Q9NU53 330 aa7.4□□□□□ -1.22
CASP4-210ENST00000531546 DTLQ9NZJ0 730 aa7.4□□□□□ -1.22
CASP4-210ENST00000531546 APEX2Q9UBZ4 518 aa7.4□□□□□ -1.22
CASP4-210ENST00000531546 FTSJ1Q9UET6 329 aa7.4□□□□□ -1.22
CASP4-210ENST00000531546 TIMM13Q9Y5L4 95 aaPredicted RBP7.4□□□□□ -1.22
CASP4-210ENST00000531546 X6R8D5 127 aa7.4□□□□□ -1.22
CASP4-210ENST00000531546 MAST1Q9Y2H9 1570 aa7.4□□□□□ -1.22
CASP4-210ENST00000531546 CEP152O94986 1710 aa7.4□□□□□ -1.23
CASP4-210ENST00000531546 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.4□□□□□ -1.23
CASP4-210ENST00000531546 GPATCH8Q9UKJ3 1502 aaKnown RBP7.39□□□□□ -1.23
CASP4-210ENST00000531546 PNPLA6Q8IY17 1366 aa7.39□□□□□ -1.23
CASP4-210ENST00000531546 NOP56O00567 594 aaKnown RBP7.39□□□□□ -1.23
CASP4-210ENST00000531546 MYO1BO43795 1136 aa7.39□□□□□ -1.23
CASP4-210ENST00000531546 AMHP03971 560 aa7.39□□□□□ -1.23
CASP4-210ENST00000531546 FPR2P25090 351 aa7.39□□□□□ -1.23
CASP4-210ENST00000531546 IL13P35225 146 aa7.39□□□□□ -1.23
CASP4-210ENST00000531546 INF2Q27J81 1249 aa7.39□□□□□ -1.23
CASP4-210ENST00000531546 E4F1Q66K89 784 aaPredicted RBP7.39□□□□□ -1.23
CASP4-210ENST00000531546 VHLLQ6RSH7 139 aa7.39□□□□□ -1.23
CASP4-210ENST00000531546 KLHL36Q8N4N3 616 aa7.39□□□□□ -1.23
CASP4-210ENST00000531546 ZNF513Q8N8E2 541 aaPredicted RBP7.39□□□□□ -1.23
CASP4-210ENST00000531546 DDX17Q92841 729 aaKnown RBP7.39□□□□□ -1.23
CASP4-210ENST00000531546 LRRC59Q96AG4 307 aaKnown RBP7.39□□□□□ -1.23
CASP4-210ENST00000531546 TRMT2BQ96GJ1 504 aaKnown RBP7.39□□□□□ -1.23
CASP4-210ENST00000531546 TOE1Q96GM8 510 aaKnown RBP7.39□□□□□ -1.23
CASP4-210ENST00000531546 TMEM209Q96SK2 561 aa7.39□□□□□ -1.23
CASP4-210ENST00000531546 COA3Q9Y2R0 106 aaPredicted RBP7.39□□□□□ -1.23
CASP4-210ENST00000531546 PIK3C2BO00750 1634 aa7.38□□□□□ -1.23
CASP4-210ENST00000531546 ASXL1Q8IXJ9 1541 aa7.38□□□□□ -1.23
CASP4-210ENST00000531546 CCDC18Q5T9S5 1454 aa7.38□□□□□ -1.23
CASP4-210ENST00000531546 BCL9LQ86UU0 1499 aa7.38□□□□□ -1.23
CASP4-210ENST00000531546 ATRNO75882 1429 aa7.38□□□□□ -1.23
CASP4-210ENST00000531546 KIAA1107Q9UPP5 1409 aa7.38□□□□□ -1.23
CASP4-210ENST00000531546 CCNB3Q8WWL7 1395 aa7.38□□□□□ -1.23
CASP4-210ENST00000531546 TMEM2Q9UHN6 1383 aa7.38□□□□□ -1.23
CASP4-210ENST00000531546 PATE3B3GLJ2 98 aa7.38□□□□□ -1.23
CASP4-210ENST00000531546 ZNF143P52747 638 aaPredicted RBP7.38□□□□□ -1.23
CASP4-210ENST00000531546 KIAA1211LQ6NV74 962 aa7.38□□□□□ -1.23
CASP4-210ENST00000531546 APBA2Q99767 749 aa7.38□□□□□ -1.23
CASP4-210ENST00000531546 BARX1Q9HBU1 254 aaPredicted RBP7.38□□□□□ -1.23
CASP4-210ENST00000531546 CYP26B1Q9NR63 512 aa7.38□□□□□ -1.23
CASP4-210ENST00000531546 TESMINQ9Y4I5 508 aa7.38□□□□□ -1.23
CASP4-210ENST00000531546 CASKIN1Q8WXD9 1431 aa7.37□□□□□ -1.23
CASP4-210ENST00000531546 SETD5Q9C0A6 1442 aa7.37□□□□□ -1.23
CASP4-210ENST00000531546 PPP2R5EQ16537 467 aa7.37□□□□□ -1.23
CASP4-210ENST00000531546 CEP68Q76N32 757 aa7.37□□□□□ -1.23
CASP4-210ENST00000531546 TRIM59Q8IWR1 403 aa7.37□□□□□ -1.23
CASP4-210ENST00000531546 DDX41Q9UJV9 622 aaKnown RBP7.37□□□□□ -1.23
CASP4-210ENST00000531546 EFR3BQ9Y2G0 817 aa7.37□□□□□ -1.23
CASP4-210ENST00000531546 HS3ST3A1Q9Y663 406 aa7.37□□□□□ -1.23
CASP4-210ENST00000531546 BRWD3Q6RI45 1802 aa7.36□□□□□ -1.23
CASP4-210ENST00000531546 MLLT6P55198 1093 aaPredicted RBP7.36□□□□□ -1.23
CASP4-210ENST00000531546 RACK1P63244 317 aaKnown RBP7.36□□□□□ -1.23
CASP4-210ENST00000531546 KRTAP1-1Q07627 177 aa7.36□□□□□ -1.23
CASP4-210ENST00000531546 PAK2Q13177 524 aa7.36□□□□□ -1.23
CASP4-210ENST00000531546 KCNAB2Q13303 367 aa7.36□□□□□ -1.23
CASP4-210ENST00000531546 SPDYAQ5MJ70 313 aa7.36□□□□□ -1.23
CASP4-210ENST00000531546 GTF2IRD2BQ6EKJ0 949 aa7.36□□□□□ -1.23
CASP4-210ENST00000531546 GTF2IRD2Q86UP8 949 aa7.36□□□□□ -1.23
CASP4-210ENST00000531546 NPLOC4Q8TAT6 608 aa7.36□□□□□ -1.23
CASP4-210ENST00000531546 ZCCHC14Q8WYQ9 949 aaKnown RBP7.36□□□□□ -1.23
CASP4-210ENST00000531546 TMEM169Q96HH4 297 aa7.36□□□□□ -1.23
CASP4-210ENST00000531546 BACH2Q9BYV9 841 aa7.36□□□□□ -1.23
CASP4-210ENST00000531546 NKX2-4Q9H2Z4 354 aa7.36□□□□□ -1.23
CASP4-210ENST00000531546 CROTQ9UKG9 612 aa7.36□□□□□ -1.23
CASP4-210ENST00000531546 PCDHB4Q9Y5E5 795 aa7.36□□□□□ -1.23
CASP4-210ENST00000531546 EFCAB6Q5THR3 1501 aa7.36□□□□□ -1.23
CASP4-210ENST00000531546 CHD2O14647 1828 aaKnown RBP7.36□□□□□ -1.23
CASP4-210ENST00000531546 CAMTA1Q9Y6Y1 1673 aa7.35□□□□□ -1.23
CASP4-210ENST00000531546 ZNF644Q9H582 1327 aaPredicted RBP7.35□□□□□ -1.23
CASP4-210ENST00000531546 HGSO14964 777 aaPredicted RBP7.35□□□□□ -1.23
CASP4-210ENST00000531546 ZNF623O75123 536 aa7.35□□□□□ -1.23
CASP4-210ENST00000531546 MFAP1P55081 439 aaKnown RBP7.35□□□□□ -1.23
CASP4-210ENST00000531546 KLF10Q13118 480 aa7.35□□□□□ -1.23
CASP4-210ENST00000531546 HS1BP3Q53T59 392 aa7.35□□□□□ -1.23
CASP4-210ENST00000531546 TEPPQ6URK8 271 aa7.35□□□□□ -1.23
CASP4-210ENST00000531546 NLRP10Q86W26 655 aa7.35□□□□□ -1.23
CASP4-210ENST00000531546 ZNF654Q8IZM8 581 aa7.35□□□□□ -1.23
CASP4-210ENST00000531546 FRS2Q8WU20 508 aa7.35□□□□□ -1.23
CASP4-210ENST00000531546 DIO2Q92813 273 aa7.35□□□□□ -1.23
CASP4-210ENST00000531546 RTEL1-TNFRSF6BF6WH68 1400 aa7.35□□□□□ -1.23
CASP4-210ENST00000531546 UNC13BO14795 1591 aa7.34□□□□□ -1.23
CASP4-210ENST00000531546 B4GALT4O60513 344 aa7.34□□□□□ -1.23
CASP4-210ENST00000531546 CASP7P55210 303 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms