RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 PCDHGC5Q9Y5F6 944 aa10.64□□□□□ -0.71
NEDD8-206ENST00000531430 TRIOO75962 3097 aa10.64□□□□□ -0.71
NEDD8-206ENST00000531430 NLRC5Q86WI3 1866 aa10.64□□□□□ -0.71
NEDD8-206ENST00000531430 M0QZ92 97 aa10.63□□□□□ -0.71
NEDD8-206ENST00000531430 CYTH3O43739 400 aa10.63□□□□□ -0.71
NEDD8-206ENST00000531430 ITGB1P05556 798 aa10.63□□□□□ -0.71
NEDD8-206ENST00000531430 STAG3L1P0CL83 205 aa10.63□□□□□ -0.71
NEDD8-206ENST00000531430 GATMP50440 423 aa10.63□□□□□ -0.71
NEDD8-206ENST00000531430 ADAM17P78536 824 aa10.63□□□□□ -0.71
NEDD8-206ENST00000531430 MRPS6P82932 125 aaKnown RBP10.63□□□□□ -0.71
NEDD8-206ENST00000531430 ZXDAP98168 799 aa10.63□□□□□ -0.71
NEDD8-206ENST00000531430 NFX1Q12986 1120 aaKnown RBP10.63□□□□□ -0.71
NEDD8-206ENST00000531430 HDAC1Q13547 482 aaPredicted RBP10.63□□□□□ -0.71
NEDD8-206ENST00000531430 CAMK1Q14012 370 aa10.63□□□□□ -0.71
NEDD8-206ENST00000531430 SLC35G1Q2M3R5 365 aa10.63□□□□□ -0.71
NEDD8-206ENST00000531430 FBXO47Q5MNV8 452 aa10.63□□□□□ -0.71
NEDD8-206ENST00000531430 IER5Q5VY09 327 aa10.63□□□□□ -0.71
NEDD8-206ENST00000531430 TSHZ1Q6ZSZ6 1077 aa10.63□□□□□ -0.71
NEDD8-206ENST00000531430 CATIPQ7Z7H3 387 aa10.63□□□□□ -0.71
NEDD8-206ENST00000531430 RALYLQ86SE5 291 aaKnown RBP10.63□□□□□ -0.71
NEDD8-206ENST00000531430 RTN4RL1Q86UN2 441 aaPredicted RBP10.63□□□□□ -0.71
NEDD8-206ENST00000531430 CHD1LQ86WJ1 897 aa10.63□□□□□ -0.71
NEDD8-206ENST00000531430 PLEKHM2Q8IWE5 1019 aa10.63□□□□□ -0.71
NEDD8-206ENST00000531430 ATOH1Q92858 354 aaPredicted RBP10.63□□□□□ -0.71
NEDD8-206ENST00000531430 CLP1Q92989 425 aaKnown RBP10.63□□□□□ -0.71
NEDD8-206ENST00000531430 ZNF689Q96CS4 500 aaPredicted RBP10.63□□□□□ -0.71
NEDD8-206ENST00000531430 INPP4AQ96PE3 977 aaPredicted RBP10.63□□□□□ -0.71
NEDD8-206ENST00000531430 APOL5Q9BWW9 433 aa10.63□□□□□ -0.71
NEDD8-206ENST00000531430 SMARCAD1Q9H4L7 1026 aa10.63□□□□□ -0.71
NEDD8-206ENST00000531430 EHMT1Q9H9B1 1298 aa10.63□□□□□ -0.71
NEDD8-206ENST00000531430 AGO3Q9H9G7 860 aaKnown RBP10.63□□□□□ -0.71
NEDD8-206ENST00000531430 ERAP1Q9NZ08 941 aa10.63□□□□□ -0.71
NEDD8-206ENST00000531430 CLEC1BQ9P126 229 aa10.63□□□□□ -0.71
NEDD8-206ENST00000531430 TRPC6Q9Y210 931 aa10.63□□□□□ -0.71
NEDD8-206ENST00000531430 DOCK5Q9H7D0 1870 aa10.62□□□□□ -0.71
NEDD8-206ENST00000531430 GSTTP1A0A1W2PQM5 241 aa10.62□□□□□ -0.71
NEDD8-206ENST00000531430 LINC00271P0C7V0 271 aa10.62□□□□□ -0.71
NEDD8-206ENST00000531430 INSRRP14616 1297 aa10.62□□□□□ -0.71
NEDD8-206ENST00000531430 SP100P23497 879 aaPredicted RBP10.62□□□□□ -0.71
NEDD8-206ENST00000531430 MGAT3Q09327 533 aa10.62□□□□□ -0.71
NEDD8-206ENST00000531430 PAK2Q13177 524 aa10.62□□□□□ -0.71
NEDD8-206ENST00000531430 SART3Q15020 963 aaKnown RBP10.62□□□□□ -0.71
NEDD8-206ENST00000531430 CMTR2Q8IYT2 770 aaKnown RBP10.62□□□□□ -0.71
NEDD8-206ENST00000531430 FBXL6Q8N531 539 aa10.62□□□□□ -0.71
NEDD8-206ENST00000531430 EFHBQ8N7U6 833 aa10.62□□□□□ -0.71
NEDD8-206ENST00000531430 P2RX5Q93086 422 aa10.62□□□□□ -0.71
NEDD8-206ENST00000531430 RRP36Q96EU6 259 aaKnown RBP10.62□□□□□ -0.71
NEDD8-206ENST00000531430 SNX27Q96L92 541 aa10.62□□□□□ -0.71
NEDD8-206ENST00000531430 SENP7Q9BQF6 1050 aa10.62□□□□□ -0.71
NEDD8-206ENST00000531430 SEC63Q9UGP8 760 aaKnown RBP10.62□□□□□ -0.71
NEDD8-206ENST00000531430 USP15Q9Y4E8 981 aaPredicted RBP10.62□□□□□ -0.71
NEDD8-206ENST00000531430 PCDHB7Q9Y5E2 793 aa10.62□□□□□ -0.71
NEDD8-206ENST00000531430 TECTAO75443 2155 aa10.61□□□□□ -0.71
NEDD8-206ENST00000531430 RRN3P2A6NIE6 340 aa10.61□□□□□ -0.71
NEDD8-206ENST00000531430 ST18O60284 1047 aa10.61□□□□□ -0.71
NEDD8-206ENST00000531430 GFRA3O60609 400 aa10.61□□□□□ -0.71
NEDD8-206ENST00000531430 RBM10P98175 930 aaKnown RBP10.61□□□□□ -0.71
NEDD8-206ENST00000531430 PKN1Q16512 942 aa10.61□□□□□ -0.71
NEDD8-206ENST00000531430 TMEM266Q2M3C6 531 aa10.61□□□□□ -0.71
NEDD8-206ENST00000531430 NAALADL2Q58DX5 795 aa10.61□□□□□ -0.71
NEDD8-206ENST00000531430 PCNX4Q63HM2 1172 aa10.61□□□□□ -0.71
NEDD8-206ENST00000531430 LLGL2Q6P1M3 1020 aa10.61□□□□□ -0.71
NEDD8-206ENST00000531430 BMP8AQ7Z5Y6 402 aa10.61□□□□□ -0.71
NEDD8-206ENST00000531430 NPAS4Q8IUM7 802 aa10.61□□□□□ -0.71
NEDD8-206ENST00000531430 CCDC82Q8N4S0 544 aa10.61□□□□□ -0.71
NEDD8-206ENST00000531430 CTCFLQ8NI51 663 aaPredicted RBP10.61□□□□□ -0.71
NEDD8-206ENST00000531430 TRAPPC12Q8WVT3 735 aa10.61□□□□□ -0.71
NEDD8-206ENST00000531430 MSLNLQ96KJ4 702 aa10.61□□□□□ -0.71
NEDD8-206ENST00000531430 PRRX2Q99811 253 aa10.61□□□□□ -0.71
NEDD8-206ENST00000531430 FTHL17Q9BXU8 183 aa10.61□□□□□ -0.71
NEDD8-206ENST00000531430 AZI2Q9H6S1 392 aa10.61□□□□□ -0.71
NEDD8-206ENST00000531430 PSTPIP2Q9H939 334 aa10.61□□□□□ -0.71
NEDD8-206ENST00000531430 TSHZ2Q9NRE2 1034 aa10.61□□□□□ -0.71
NEDD8-206ENST00000531430 PADI3Q9ULW8 664 aa10.61□□□□□ -0.71
NEDD8-206ENST00000531430 PCDHB12Q9Y5F1 795 aa10.61□□□□□ -0.71
NEDD8-206ENST00000531430 TRPV2Q9Y5S1 764 aa10.61□□□□□ -0.71
NEDD8-206ENST00000531430 U3KPZ7 1027 aaPredicted RBP10.61□□□□□ -0.71
NEDD8-206ENST00000531430 ZFHX2Q9C0A1 2572 aaPredicted RBP10.6□□□□□ -0.71
NEDD8-206ENST00000531430 TBKBP1A7MCY6 615 aa10.6□□□□□ -0.71
NEDD8-206ENST00000531430 LOC730098B7Z3J9 87 aa10.6□□□□□ -0.71
NEDD8-206ENST00000531430 H0Y858 1186 aa10.6□□□□□ -0.71
NEDD8-206ENST00000531430 EYA4O95677 639 aa10.6□□□□□ -0.71
NEDD8-206ENST00000531430 SCG2P13521 617 aa10.6□□□□□ -0.71
NEDD8-206ENST00000531430 CA8P35219 290 aa10.6□□□□□ -0.71
NEDD8-206ENST00000531430 TCF15Q12870 199 aa10.6□□□□□ -0.71
NEDD8-206ENST00000531430 MTMR1Q13613 665 aa10.6□□□□□ -0.71
NEDD8-206ENST00000531430 MARCH8Q5T0T0 291 aa10.6□□□□□ -0.71
NEDD8-206ENST00000531430 XRRA1Q6P2D8 792 aa10.6□□□□□ -0.71
NEDD8-206ENST00000531430 NFXL1Q6ZNB6 911 aa10.6□□□□□ -0.71
NEDD8-206ENST00000531430 THNSL1Q8IYQ7 743 aa10.6□□□□□ -0.71
NEDD8-206ENST00000531430 CMTR1Q8N1G2 835 aaKnown RBP10.6□□□□□ -0.71
NEDD8-206ENST00000531430 NCOA7Q8NI08 942 aa10.6□□□□□ -0.71
NEDD8-206ENST00000531430 LINC01599Q8WXQ3 324 aa10.6□□□□□ -0.71
NEDD8-206ENST00000531430 TNPO1Q92973 898 aaKnown RBP10.6□□□□□ -0.71
NEDD8-206ENST00000531430 CDHR1Q96JP9 859 aa10.6□□□□□ -0.71
NEDD8-206ENST00000531430 MYL10Q9BUA6 226 aa10.6□□□□□ -0.71
NEDD8-206ENST00000531430 PHF7Q9BWX1 381 aaPredicted RBP10.6□□□□□ -0.71
NEDD8-206ENST00000531430 CELF4Q9BZC1 486 aaKnown RBP10.6□□□□□ -0.71
NEDD8-206ENST00000531430 TLR9Q9NR96 1032 aa10.6□□□□□ -0.71
NEDD8-206ENST00000531430 AAASQ9NRG9 546 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms