RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 STK3Q13188 491 aa12.47□□□□□ -0.41
CAPN1-221ENST00000531068 TRAF7Q6Q0C0 670 aa12.47□□□□□ -0.41
CAPN1-221ENST00000531068 RPAINQ86UA6 219 aa12.47□□□□□ -0.41
CAPN1-221ENST00000531068 HERC6Q8IVU3 1022 aa12.47□□□□□ -0.41
CAPN1-221ENST00000531068 MYLIPQ8WY64 445 aa12.47□□□□□ -0.41
CAPN1-221ENST00000531068 WNT8BQ93098 351 aa12.47□□□□□ -0.41
CAPN1-221ENST00000531068 TMX3Q96JJ7 454 aa12.47□□□□□ -0.41
CAPN1-221ENST00000531068 GAS2L1Q99501 681 aaPredicted RBP12.47□□□□□ -0.41
CAPN1-221ENST00000531068 LARP6Q9BRS8 491 aaKnown RBP12.47□□□□□ -0.41
CAPN1-221ENST00000531068 ZBED2Q9BTP6 218 aa12.47□□□□□ -0.41
CAPN1-221ENST00000531068 NKX2-4Q9H2Z4 354 aa12.47□□□□□ -0.41
CAPN1-221ENST00000531068 TELO2Q9Y4R8 837 aa12.47□□□□□ -0.41
CAPN1-221ENST00000531068 LTBP2Q14767 1821 aa12.46□□□□□ -0.41
CAPN1-221ENST00000531068 BAZ2BQ9UIF8 2168 aaKnown RBP12.46□□□□□ -0.41
CAPN1-221ENST00000531068 BACH1O14867 736 aa12.46□□□□□ -0.41
CAPN1-221ENST00000531068 MARK3P27448 753 aa12.46□□□□□ -0.41
CAPN1-221ENST00000531068 RABGGTBP53611 331 aa12.46□□□□□ -0.41
CAPN1-221ENST00000531068 ITGB3BPQ13352 177 aaPredicted RBP12.46□□□□□ -0.41
CAPN1-221ENST00000531068 NBR1Q14596 966 aa12.46□□□□□ -0.41
CAPN1-221ENST00000531068 GRIK4Q16099 956 aa12.46□□□□□ -0.41
CAPN1-221ENST00000531068 PRR16Q569H4 304 aa12.46□□□□□ -0.41
CAPN1-221ENST00000531068 FAM160B1Q5W0V3 765 aa12.46□□□□□ -0.41
CAPN1-221ENST00000531068 MIS18BP1Q6P0N0 1132 aa12.46□□□□□ -0.41
CAPN1-221ENST00000531068 HSCBQ8IWL3 235 aa12.46□□□□□ -0.41
CAPN1-221ENST00000531068 LMBR1Q8WVP7 490 aa12.46□□□□□ -0.41
CAPN1-221ENST00000531068 SEPT8Q92599 483 aa12.46□□□□□ -0.41
CAPN1-221ENST00000531068 ZNF577Q9BSK1 485 aa12.46□□□□□ -0.41
CAPN1-221ENST00000531068 TPCN1Q9ULQ1 816 aa12.46□□□□□ -0.41
CAPN1-221ENST00000531068 CIZ1Q9ULV3 898 aaPredicted RBP12.46□□□□□ -0.41
CAPN1-221ENST00000531068 PCDHA4Q9UN74 947 aa12.46□□□□□ -0.41
CAPN1-221ENST00000531068 LIMCH1Q9UPQ0 1083 aa12.46□□□□□ -0.41
CAPN1-221ENST00000531068 SCN10AQ9Y5Y9 1956 aa12.45□□□□□ -0.42
CAPN1-221ENST00000531068 IGLV3-22A0A075B6J6 115 aa12.45□□□□□ -0.42
CAPN1-221ENST00000531068 MBLAC1A4D2B0 266 aaPredicted RBP12.45□□□□□ -0.42
CAPN1-221ENST00000531068 DHX15O43143 795 aaKnown RBP12.45□□□□□ -0.42
CAPN1-221ENST00000531068 PFKFB2O60825 505 aa12.45□□□□□ -0.42
CAPN1-221ENST00000531068 LARGE1O95461 756 aa12.45□□□□□ -0.42
CAPN1-221ENST00000531068 INSRRP14616 1297 aa12.45□□□□□ -0.42
CAPN1-221ENST00000531068 WDR5P61964 334 aaKnown RBP12.45□□□□□ -0.42
CAPN1-221ENST00000531068 KRT76Q01546 638 aa12.45□□□□□ -0.42
CAPN1-221ENST00000531068 FAM26DQ5JW98 314 aa12.45□□□□□ -0.42
CAPN1-221ENST00000531068 PPP2R2DQ66LE6 453 aa12.45□□□□□ -0.42
CAPN1-221ENST00000531068 ZNF746Q6NUN9 644 aaPredicted RBP12.45□□□□□ -0.42
CAPN1-221ENST00000531068 ABHD15Q6UXT9 468 aa12.45□□□□□ -0.42
CAPN1-221ENST00000531068 BLIDQ8IZY5 108 aa12.45□□□□□ -0.42
CAPN1-221ENST00000531068 DBF4BQ8NFT6 615 aa12.45□□□□□ -0.42
CAPN1-221ENST00000531068 MAFAQ8NHW3 353 aaPredicted RBP12.45□□□□□ -0.42
CAPN1-221ENST00000531068 WASF1Q92558 559 aa12.45□□□□□ -0.42
CAPN1-221ENST00000531068 APBB2Q92870 758 aa12.45□□□□□ -0.42
CAPN1-221ENST00000531068 PCYT2Q99447 389 aa12.45□□□□□ -0.42
CAPN1-221ENST00000531068 TUBE1Q9UJT0 475 aa12.45□□□□□ -0.42
CAPN1-221ENST00000531068 TRPC6Q9Y210 931 aa12.45□□□□□ -0.42
CAPN1-221ENST00000531068 YBX2Q9Y2T7 364 aaKnown RBP12.45□□□□□ -0.42
CAPN1-221ENST00000531068 IGKV6D-21A0A0A0MT36 114 aa12.44□□□□□ -0.42
CAPN1-221ENST00000531068 POTEB3A0JP26 581 aa12.44□□□□□ -0.42
CAPN1-221ENST00000531068 TLL1O43897 1013 aa12.44□□□□□ -0.42
CAPN1-221ENST00000531068 HBP1O60381 514 aa12.44□□□□□ -0.42
CAPN1-221ENST00000531068 AMHP03971 560 aa12.44□□□□□ -0.42
CAPN1-221ENST00000531068 CTSHP09668 335 aa12.44□□□□□ -0.42
CAPN1-221ENST00000531068 IGBP1P78318 339 aa12.44□□□□□ -0.42
CAPN1-221ENST00000531068 SCRN1Q12765 414 aa12.44□□□□□ -0.42
CAPN1-221ENST00000531068 MBTPS1Q14703 1052 aa12.44□□□□□ -0.42
CAPN1-221ENST00000531068 PLCB4Q15147 1175 aa12.44□□□□□ -0.42
CAPN1-221ENST00000531068 PLEKHG4Q58EX7 1191 aa12.44□□□□□ -0.42
CAPN1-221ENST00000531068 IER5Q5VY09 327 aa12.44□□□□□ -0.42
CAPN1-221ENST00000531068 SWSAP1Q6NVH7 229 aa12.44□□□□□ -0.42
CAPN1-221ENST00000531068 POTEBQ6S5H4 581 aa12.44□□□□□ -0.42
CAPN1-221ENST00000531068 SMAP1Q8IYB5 467 aaPredicted RBP12.44□□□□□ -0.42
CAPN1-221ENST00000531068 NME8Q8N427 588 aa12.44□□□□□ -0.42
CAPN1-221ENST00000531068 DAGLBQ8NCG7 672 aa12.44□□□□□ -0.42
CAPN1-221ENST00000531068 RASGRP4Q8TDF6 673 aa12.44□□□□□ -0.42
CAPN1-221ENST00000531068 RAD9AQ99638 391 aa12.44□□□□□ -0.42
CAPN1-221ENST00000531068 ZNF302Q9NR11 478 aa12.44□□□□□ -0.42
CAPN1-221ENST00000531068 PCDHA10Q9Y5I2 948 aa12.44□□□□□ -0.42
CAPN1-221ENST00000531068 DDX39AO00148 427 aaKnown RBP12.43□□□□□ -0.42
CAPN1-221ENST00000531068 ADAMTS3O15072 1205 aa12.43□□□□□ -0.42
CAPN1-221ENST00000531068 CCNE2O96020 404 aa12.43□□□□□ -0.42
CAPN1-221ENST00000531068 CA3P07451 260 aa12.43□□□□□ -0.42
CAPN1-221ENST00000531068 PSAPP07602 524 aa12.43□□□□□ -0.42
CAPN1-221ENST00000531068 MYOGP15173 224 aa12.43□□□□□ -0.42
CAPN1-221ENST00000531068 DEKP35659 375 aaKnown RBP12.43□□□□□ -0.42
CAPN1-221ENST00000531068 ME3Q16798 604 aa12.43□□□□□ -0.42
CAPN1-221ENST00000531068 MARCH8Q5T0T0 291 aa12.43□□□□□ -0.42
CAPN1-221ENST00000531068 PDXDC2PQ6P474 469 aa12.43□□□□□ -0.42
CAPN1-221ENST00000531068 FAM43BQ6ZT52 329 aaPredicted RBP12.43□□□□□ -0.42
CAPN1-221ENST00000531068 KRT25Q7Z3Z0 450 aa12.43□□□□□ -0.42
CAPN1-221ENST00000531068 CKAP2LQ8IYA6 745 aa12.43□□□□□ -0.42
CAPN1-221ENST00000531068 TBCKQ8TEA7 893 aa12.43□□□□□ -0.42
CAPN1-221ENST00000531068 ATP8B4Q8TF62 1192 aa12.43□□□□□ -0.42
CAPN1-221ENST00000531068 INTS4Q96HW7 963 aaKnown RBP12.43□□□□□ -0.42
CAPN1-221ENST00000531068 ZSCAN31Q96LW9 406 aaPredicted RBP12.43□□□□□ -0.42
CAPN1-221ENST00000531068 RIT2Q99578 217 aa12.43□□□□□ -0.42
CAPN1-221ENST00000531068 PRDM12Q9H4Q4 367 aa12.43□□□□□ -0.42
CAPN1-221ENST00000531068 CHMP5Q9NZZ3 219 aa12.43□□□□□ -0.42
CAPN1-221ENST00000531068 SAMM50Q9Y512 469 aa12.43□□□□□ -0.42
CAPN1-221ENST00000531068 PCDHA2Q9Y5H9 948 aa12.43□□□□□ -0.42
CAPN1-221ENST00000531068 STK36Q9NRP7 1315 aa12.42□□□□□ -0.42
CAPN1-221ENST00000531068 CYP3A7-CYP3A51PA0A087WV96 503 aa12.42□□□□□ -0.42
CAPN1-221ENST00000531068 M0QZ92 97 aa12.42□□□□□ -0.42
CAPN1-221ENST00000531068 GJB5O95377 273 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms