RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 ZNF286BP0CG31 522 aa19.02■□□□□ 0.64
SF3B2-211ENST00000531041 LONP1P36776 959 aaKnown RBP19.02■□□□□ 0.64
SF3B2-211ENST00000531041 GRIN1Q05586 938 aa19.02■□□□□ 0.64
SF3B2-211ENST00000531041 UTP14CQ5TAP6 766 aaKnown RBP19.02■□□□□ 0.64
SF3B2-211ENST00000531041 FAM160B1Q5W0V3 765 aa19.02■□□□□ 0.64
SF3B2-211ENST00000531041 SWSAP1Q6NVH7 229 aa19.02■□□□□ 0.64
SF3B2-211ENST00000531041 CXCL17Q6UXB2 119 aa19.02■□□□□ 0.64
SF3B2-211ENST00000531041 PLPPR4Q7Z2D5 763 aa19.02■□□□□ 0.64
SF3B2-211ENST00000531041 NEK9Q8TD19 979 aa19.02■□□□□ 0.64
SF3B2-211ENST00000531041 EIF2AK1Q9BQI3 630 aaKnown RBP19.02■□□□□ 0.64
SF3B2-211ENST00000531041 MTG1Q9BT17 334 aaPredicted RBP19.02■□□□□ 0.64
SF3B2-211ENST00000531041 AZI2Q9H6S1 392 aa19.02■□□□□ 0.64
SF3B2-211ENST00000531041 ZNF302Q9NR11 478 aa19.02■□□□□ 0.64
SF3B2-211ENST00000531041 MAFBQ9Y5Q3 323 aaPredicted RBP19.02■□□□□ 0.64
SF3B2-211ENST00000531041 STK24Q9Y6E0 443 aa19.02■□□□□ 0.64
SF3B2-211ENST00000531041 H3BRB1 525 aa19.01■□□□□ 0.63
SF3B2-211ENST00000531041 BACH1O14867 736 aa19.01■□□□□ 0.63
SF3B2-211ENST00000531041 P4HBP07237 508 aaKnown RBP19.01■□□□□ 0.63
SF3B2-211ENST00000531041 SLC26A2P50443 739 aa19.01■□□□□ 0.63
SF3B2-211ENST00000531041 STAT5BP51692 787 aa19.01■□□□□ 0.63
SF3B2-211ENST00000531041 TRIM50Q86XT4 487 aa19.01■□□□□ 0.63
SF3B2-211ENST00000531041 ERMNQ8TAM6 284 aa19.01■□□□□ 0.63
SF3B2-211ENST00000531041 KAT2BQ92831 832 aa19.01■□□□□ 0.63
SF3B2-211ENST00000531041 GLG1Q92896 1179 aa19.01■□□□□ 0.63
SF3B2-211ENST00000531041 HSD17B14Q9BPX1 270 aa19.01■□□□□ 0.63
SF3B2-211ENST00000531041 TUT1Q9H6E5 874 aaKnown RBP19.01■□□□□ 0.63
SF3B2-211ENST00000531041 ERAP1Q9NZ08 941 aa19.01■□□□□ 0.63
SF3B2-211ENST00000531041 GABBR1Q9UBS5 961 aa19.01■□□□□ 0.63
SF3B2-211ENST00000531041 ZNF215Q9UL58 517 aaPredicted RBP19.01■□□□□ 0.63
SF3B2-211ENST00000531041 IGSF9BQ9UPX0 1349 aa19.01■□□□□ 0.63
SF3B2-211ENST00000531041 A0A1W2PQ45 241 aaPredicted RBP19■□□□□ 0.63
SF3B2-211ENST00000531041 A0A1W2PQY0 241 aa19■□□□□ 0.63
SF3B2-211ENST00000531041 HAS3O00219 553 aa19■□□□□ 0.63
SF3B2-211ENST00000531041 SLITRK3O94933 977 aa19■□□□□ 0.63
SF3B2-211ENST00000531041 EN2P19622 333 aaPredicted RBP19■□□□□ 0.63
SF3B2-211ENST00000531041 QARSP47897 775 aaKnown RBP19■□□□□ 0.63
SF3B2-211ENST00000531041 ZNF579Q8NAF0 562 aaKnown RBP19■□□□□ 0.63
SF3B2-211ENST00000531041 ATP6V0A1Q93050 837 aa19■□□□□ 0.63
SF3B2-211ENST00000531041 GLT1D1Q96MS3 346 aa19■□□□□ 0.63
SF3B2-211ENST00000531041 KATNAL1Q9BW62 490 aa19■□□□□ 0.63
SF3B2-211ENST00000531041 CSRNP2Q9H175 543 aa19■□□□□ 0.63
SF3B2-211ENST00000531041 RGL1Q9NZL6 768 aa19■□□□□ 0.63
SF3B2-211ENST00000531041 EVPLQ92817 2033 aa19■□□□□ 0.63
SF3B2-211ENST00000531041 DKC1O60832 514 aaKnown RBP eCLIP19■□□□□ 0.63
SF3B2-211ENST00000531041 CUTAO60888 179 aa19■□□□□ 0.63
SF3B2-211ENST00000531041 COL6A1P12109 1028 aa19■□□□□ 0.63
SF3B2-211ENST00000531041 RPA1P27694 616 aa19■□□□□ 0.63
SF3B2-211ENST00000531041 ME1P48163 572 aa19■□□□□ 0.63
SF3B2-211ENST00000531041 PSMC5P62195 406 aa19■□□□□ 0.63
SF3B2-211ENST00000531041 UGCGQ16739 394 aa19■□□□□ 0.63
SF3B2-211ENST00000531041 HAUS3Q68CZ6 603 aa19■□□□□ 0.63
SF3B2-211ENST00000531041 PDXDC2PQ6P474 469 aa19■□□□□ 0.63
SF3B2-211ENST00000531041 CLEC17AQ6ZS10 378 aa19■□□□□ 0.63
SF3B2-211ENST00000531041 BANK1Q8NDB2 785 aa19■□□□□ 0.63
SF3B2-211ENST00000531041 DYDC2Q96IM9 177 aa19■□□□□ 0.63
SF3B2-211ENST00000531041 CLIC6Q96NY7 704 aa19■□□□□ 0.63
SF3B2-211ENST00000531041 POLR3CQ9BUI4 534 aaPredicted RBP19■□□□□ 0.63
SF3B2-211ENST00000531041 TUFT1Q9NNX1 390 aa19■□□□□ 0.63
SF3B2-211ENST00000531041 PCDHA7Q9UN72 937 aa19■□□□□ 0.63
SF3B2-211ENST00000531041 DNAH12Q6ZR08 3092 aa18.99■□□□□ 0.63
SF3B2-211ENST00000531041 PP2D1A8MPX8 630 aa18.99■□□□□ 0.63
SF3B2-211ENST00000531041 ZNF862O60290 1169 aa18.99■□□□□ 0.63
SF3B2-211ENST00000531041 SPATA31C1P0DKV0 1188 aa18.99■□□□□ 0.63
SF3B2-211ENST00000531041 MUTP22033 750 aa18.99■□□□□ 0.63
SF3B2-211ENST00000531041 CDC25AP30304 524 aa18.99■□□□□ 0.63
SF3B2-211ENST00000531041 PSEN2P49810 448 aa18.99■□□□□ 0.63
SF3B2-211ENST00000531041 AXDND1Q5T1B0 1012 aaPredicted RBP18.99■□□□□ 0.63
SF3B2-211ENST00000531041 KRT79Q5XKE5 535 aa18.99■□□□□ 0.63
SF3B2-211ENST00000531041 MMTAG2Q9BU76 263 aaKnown RBP18.99■□□□□ 0.63
SF3B2-211ENST00000531041 GDPD2Q9HCC8 539 aa18.99■□□□□ 0.63
SF3B2-211ENST00000531041 CCDC85CA6NKD9 419 aa18.98■□□□□ 0.63
SF3B2-211ENST00000531041 SLC26A4O43511 780 aa18.98■□□□□ 0.63
SF3B2-211ENST00000531041 MED24O75448 989 aa18.98■□□□□ 0.63
SF3B2-211ENST00000531041 ATP4AP20648 1035 aa18.98■□□□□ 0.63
SF3B2-211ENST00000531041 UBA7P41226 1012 aa18.98■□□□□ 0.63
SF3B2-211ENST00000531041 CYP4A11Q02928 519 aa18.98■□□□□ 0.63
SF3B2-211ENST00000531041 MFSD10Q14728 455 aa18.98■□□□□ 0.63
SF3B2-211ENST00000531041 KIAA0753Q2KHM9 967 aa18.98■□□□□ 0.63
SF3B2-211ENST00000531041 CATSPER3Q86XQ3 398 aa18.98■□□□□ 0.63
SF3B2-211ENST00000531041 C4orf19Q8IY42 314 aa18.98■□□□□ 0.63
SF3B2-211ENST00000531041 SNX29Q8TEQ0 813 aa18.98■□□□□ 0.63
SF3B2-211ENST00000531041 LXNQ9BS40 222 aa18.98■□□□□ 0.63
SF3B2-211ENST00000531041 CCSER1Q9C0I3 900 aa18.98■□□□□ 0.63
SF3B2-211ENST00000531041 RNPEPQ9H4A4 650 aa18.98■□□□□ 0.63
SF3B2-211ENST00000531041 ZSWIM4Q9H7M6 989 aa18.98■□□□□ 0.63
SF3B2-211ENST00000531041 STARD7Q9NQZ5 370 aa18.98■□□□□ 0.63
SF3B2-211ENST00000531041 WRAP73Q9P2S5 460 aaPredicted RBP18.98■□□□□ 0.63
SF3B2-211ENST00000531041 ALPK3Q96L96 1907 aa18.97■□□□□ 0.63
SF3B2-211ENST00000531041 LYPLA2O95372 231 aa18.97■□□□□ 0.63
SF3B2-211ENST00000531041 CCT6AP40227 531 aaKnown RBP18.97■□□□□ 0.63
SF3B2-211ENST00000531041 CTTNQ14247 550 aaKnown RBP18.97■□□□□ 0.63
SF3B2-211ENST00000531041 PLCB4Q15147 1175 aa18.97■□□□□ 0.63
SF3B2-211ENST00000531041 HYIQ5T013 277 aa18.97■□□□□ 0.63
SF3B2-211ENST00000531041 ADALQ6DHV7 355 aa18.97■□□□□ 0.63
SF3B2-211ENST00000531041 UBE2Q1Q7Z7E8 422 aa18.97■□□□□ 0.63
SF3B2-211ENST00000531041 TPH2Q8IWU9 490 aa18.97■□□□□ 0.63
SF3B2-211ENST00000531041 DIS3LQ8TF46 1054 aaKnown RBP18.97■□□□□ 0.63
SF3B2-211ENST00000531041 VTI1AQ96AJ9 217 aa18.97■□□□□ 0.63
SF3B2-211ENST00000531041 PAWRQ96IZ0 340 aaKnown RBP18.97■□□□□ 0.63
SF3B2-211ENST00000531041 FAM167AQ96KS9 214 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms