RNA–Protein interactions for RNA: ENST00000530680.1

SRPRA-204, Transcript of SRP receptor subunit alpha, humanhuman

TSL 4

Gene SRPRA, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-204ENST00000530680 CCDC43Q96MW1 224 aaKnown RBP16.67■□□□□ 0.26
SRPRA-204ENST00000530680 SMARCAD1Q9H4L7 1026 aa16.67■□□□□ 0.26
SRPRA-204ENST00000530680 ZNF302Q9NR11 478 aa16.67■□□□□ 0.26
SRPRA-204ENST00000530680 ERAP1Q9NZ08 941 aa16.67■□□□□ 0.26
SRPRA-204ENST00000530680 CLIC4Q9Y696 253 aa16.67■□□□□ 0.26
SRPRA-204ENST00000530680 EMSYQ7Z589 1322 aa16.67■□□□□ 0.26
SRPRA-204ENST00000530680 A0A0U1RQG5 324 aaPredicted RBP16.66■□□□□ 0.26
SRPRA-204ENST00000530680 VWA3AA6NCI4 1184 aa16.66■□□□□ 0.26
SRPRA-204ENST00000530680 CTAGE5O15320 804 aa16.66■□□□□ 0.26
SRPRA-204ENST00000530680 DKC1O60832 514 aaKnown RBP eCLIP16.66■□□□□ 0.26
SRPRA-204ENST00000530680 MARK3P27448 753 aa16.66■□□□□ 0.26
SRPRA-204ENST00000530680 PRPHP41219 470 aa16.66■□□□□ 0.26
SRPRA-204ENST00000530680 MFSD10Q14728 455 aa16.66■□□□□ 0.26
SRPRA-204ENST00000530680 HAUS3Q68CZ6 603 aa16.66■□□□□ 0.26
SRPRA-204ENST00000530680 ATL3Q6DD88 541 aa16.66■□□□□ 0.26
SRPRA-204ENST00000530680 PDXDC2PQ6P474 469 aa16.66■□□□□ 0.26
SRPRA-204ENST00000530680 TRIM50Q86XT4 487 aa16.66■□□□□ 0.26
SRPRA-204ENST00000530680 RASSF8Q8NHQ8 419 aa16.66■□□□□ 0.26
SRPRA-204ENST00000530680 TNPO1Q92973 898 aaKnown RBP16.66■□□□□ 0.26
SRPRA-204ENST00000530680 MTMR9Q96QG7 549 aa16.66■□□□□ 0.26
SRPRA-204ENST00000530680 USP28Q96RU2 1077 aa16.66■□□□□ 0.26
SRPRA-204ENST00000530680 FTOQ9C0B1 505 aaKnown RBP eCLIP16.66■□□□□ 0.26
SRPRA-204ENST00000530680 CHMP5Q9NZZ3 219 aa16.66■□□□□ 0.26
SRPRA-204ENST00000530680 GABBR1Q9UBS5 961 aa16.66■□□□□ 0.26
SRPRA-204ENST00000530680 VAV3Q9UKW4 847 aa16.66■□□□□ 0.26
SRPRA-204ENST00000530680 ZMYND8Q9ULU4 1186 aaPredicted RBP16.66■□□□□ 0.26
SRPRA-204ENST00000530680 TRPC6Q9Y210 931 aa16.66■□□□□ 0.26
SRPRA-204ENST00000530680 SCN10AQ9Y5Y9 1956 aa16.66■□□□□ 0.26
SRPRA-204ENST00000530680 TCHHQ07283 1943 aa16.65■□□□□ 0.26
SRPRA-204ENST00000530680 LOXHD1Q8IVV2 1947 aa16.65■□□□□ 0.26
SRPRA-204ENST00000530680 GSTTP1A0A1W2PQM5 241 aa16.65■□□□□ 0.26
SRPRA-204ENST00000530680 POTEMA6NI47 508 aa16.65■□□□□ 0.26
SRPRA-204ENST00000530680 H3BRB1 525 aa16.65■□□□□ 0.26
SRPRA-204ENST00000530680 PSEN2P49810 448 aa16.65■□□□□ 0.26
SRPRA-204ENST00000530680 STAT5BP51692 787 aa16.65■□□□□ 0.26
SRPRA-204ENST00000530680 ATN1P54259 1190 aaPredicted RBP16.65■□□□□ 0.26
SRPRA-204ENST00000530680 PSMC6P62333 389 aa16.65■□□□□ 0.26
SRPRA-204ENST00000530680 KIAA0753Q2KHM9 967 aa16.65■□□□□ 0.26
SRPRA-204ENST00000530680 ARL6IP4Q66PJ3 421 aaKnown RBP16.65■□□□□ 0.26
SRPRA-204ENST00000530680 SWSAP1Q6NVH7 229 aa16.65■□□□□ 0.26
SRPRA-204ENST00000530680 C7orf31Q8N865 590 aa16.65■□□□□ 0.26
SRPRA-204ENST00000530680 TUT1Q9H6E5 874 aaKnown RBP16.65■□□□□ 0.26
SRPRA-204ENST00000530680 TFIP11Q9UBB9 837 aaKnown RBP16.65■□□□□ 0.26
SRPRA-204ENST00000530680 LRWD1Q9UFC0 647 aa16.65■□□□□ 0.26
SRPRA-204ENST00000530680 STK24Q9Y6E0 443 aa16.65■□□□□ 0.26
SRPRA-204ENST00000530680 MROH7Q68CQ1 1323 aa16.65■□□□□ 0.26
SRPRA-204ENST00000530680 F2P00734 622 aa16.64■□□□□ 0.25
SRPRA-204ENST00000530680 HOXD8P13378 290 aaPredicted RBP16.64■□□□□ 0.25
SRPRA-204ENST00000530680 SLC26A2P50443 739 aa16.64■□□□□ 0.25
SRPRA-204ENST00000530680 FXR2P51116 673 aaKnown RBP eCLIP16.64■□□□□ 0.25
SRPRA-204ENST00000530680 DNM1Q05193 864 aaKnown RBP16.64■□□□□ 0.25
SRPRA-204ENST00000530680 CCSAPQ6IQ19 270 aaPredicted RBP16.64■□□□□ 0.25
SRPRA-204ENST00000530680 ABHD15Q6UXT9 468 aa16.64■□□□□ 0.25
SRPRA-204ENST00000530680 TRMT1LQ7Z2T5 733 aaKnown RBP16.64■□□□□ 0.25
SRPRA-204ENST00000530680 CCDC60Q8IWA6 550 aaPredicted RBP16.64■□□□□ 0.25
SRPRA-204ENST00000530680 DEFB123Q8N688 67 aa16.64■□□□□ 0.25
SRPRA-204ENST00000530680 BANK1Q8NDB2 785 aa16.64■□□□□ 0.25
SRPRA-204ENST00000530680 NEK9Q8TD19 979 aa16.64■□□□□ 0.25
SRPRA-204ENST00000530680 CDK5RAP3Q96JB5 506 aa16.64■□□□□ 0.25
SRPRA-204ENST00000530680 FAM167AQ96KS9 214 aa16.64■□□□□ 0.25
SRPRA-204ENST00000530680 NOD1Q9Y239 953 aa16.64■□□□□ 0.25
SRPRA-204ENST00000530680 TELO2Q9Y4R8 837 aa16.64■□□□□ 0.25
SRPRA-204ENST00000530680 TLR3O15455 904 aaKnown RBP16.63■□□□□ 0.25
SRPRA-204ENST00000530680 YEATS4O95619 227 aa16.63■□□□□ 0.25
SRPRA-204ENST00000530680 MARCKSP29966 332 aaPredicted RBP16.63■□□□□ 0.25
SRPRA-204ENST00000530680 TXLNAP40222 546 aa16.63■□□□□ 0.25
SRPRA-204ENST00000530680 CYP4A11Q02928 519 aa16.63■□□□□ 0.25
SRPRA-204ENST00000530680 ITGA7Q13683 1181 aa16.63■□□□□ 0.25
SRPRA-204ENST00000530680 EPHA7Q15375 998 aa16.63■□□□□ 0.25
SRPRA-204ENST00000530680 ZRSR1Q15695 479 aaKnown RBP16.63■□□□□ 0.25
SRPRA-204ENST00000530680 LRIT3Q3SXY7 679 aa16.63■□□□□ 0.25
SRPRA-204ENST00000530680 KRT79Q5XKE5 535 aa16.63■□□□□ 0.25
SRPRA-204ENST00000530680 PLPPR4Q7Z2D5 763 aa16.63■□□□□ 0.25
SRPRA-204ENST00000530680 KCNG4Q8TDN1 519 aa16.63■□□□□ 0.25
SRPRA-204ENST00000530680 LXNQ9BS40 222 aa16.63■□□□□ 0.25
SRPRA-204ENST00000530680 SEZ6LQ9BYH1 1024 aa16.63■□□□□ 0.25
SRPRA-204ENST00000530680 ZDHHC9Q9Y397 364 aa16.63■□□□□ 0.25
SRPRA-204ENST00000530680 IGSF9BQ9UPX0 1349 aa16.63■□□□□ 0.25
SRPRA-204ENST00000530680 EML1O00423 815 aa16.62■□□□□ 0.25
SRPRA-204ENST00000530680 SPTLC2O15270 562 aa16.62■□□□□ 0.25
SRPRA-204ENST00000530680 LGR5O75473 907 aa16.62■□□□□ 0.25
SRPRA-204ENST00000530680 ATG7O95352 703 aa16.62■□□□□ 0.25
SRPRA-204ENST00000530680 P4HBP07237 508 aaKnown RBP16.62■□□□□ 0.25
SRPRA-204ENST00000530680 SYN1P17600 705 aa16.62■□□□□ 0.25
SRPRA-204ENST00000530680 DDIT3P35638 169 aa16.62■□□□□ 0.25
SRPRA-204ENST00000530680 CCT6AP40227 531 aaKnown RBP16.62■□□□□ 0.25
SRPRA-204ENST00000530680 QARSP47897 775 aaKnown RBP16.62■□□□□ 0.25
SRPRA-204ENST00000530680 ME1P48163 572 aa16.62■□□□□ 0.25
SRPRA-204ENST00000530680 NASPP49321 788 aaPredicted RBP16.62■□□□□ 0.25
SRPRA-204ENST00000530680 PSMC5P62195 406 aa16.62■□□□□ 0.25
SRPRA-204ENST00000530680 PRKCEQ02156 737 aa16.62■□□□□ 0.25
SRPRA-204ENST00000530680 PPFIA1Q13136 1202 aa16.62■□□□□ 0.25
SRPRA-204ENST00000530680 NBPF20Q3BBV1 942 aa16.62■□□□□ 0.25
SRPRA-204ENST00000530680 TDHQ8IZJ6 230 aa16.62■□□□□ 0.25
SRPRA-204ENST00000530680 C4orf32Q8N8J7 132 aa16.62■□□□□ 0.25
SRPRA-204ENST00000530680 KRI1Q8N9T8 703 aaKnown RBP16.62■□□□□ 0.25
SRPRA-204ENST00000530680 AFAP1L1Q8TED9 768 aa16.62■□□□□ 0.25
SRPRA-204ENST00000530680 SNX29Q8TEQ0 813 aa16.62■□□□□ 0.25
SRPRA-204ENST00000530680 DYDC2Q96IM9 177 aa16.62■□□□□ 0.25
SRPRA-204ENST00000530680 SPATA32Q96LK8 384 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms