RNA–Protein interactions for RNA: ENST00000530068.5

CTNND1-224, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-224ENST00000530068 CHD1LQ86WJ1 897 aa12.78□□□□□ -0.36
CTNND1-224ENST00000530068 SMC5Q8IY18 1101 aa12.78□□□□□ -0.36
CTNND1-224ENST00000530068 GLG1Q92896 1179 aa12.78□□□□□ -0.36
CTNND1-224ENST00000530068 PBXIP1Q96AQ6 731 aa12.78□□□□□ -0.36
CTNND1-224ENST00000530068 MSLNLQ96KJ4 702 aa12.78□□□□□ -0.36
CTNND1-224ENST00000530068 ALG13Q9NP73 1137 aaKnown RBP12.78□□□□□ -0.36
CTNND1-224ENST00000530068 FOXD4L1Q9NU39 408 aa12.78□□□□□ -0.36
CTNND1-224ENST00000530068 CDY2AQ9Y6F7 541 aa12.78□□□□□ -0.36
CTNND1-224ENST00000530068 ZNF318Q5VUA4 2279 aa12.78□□□□□ -0.36
CTNND1-224ENST00000530068 CACNA1HO95180 2353 aa12.77□□□□□ -0.36
CTNND1-224ENST00000530068 ZDBF2Q9HCK1 2354 aa12.77□□□□□ -0.36
CTNND1-224ENST00000530068 MBLAC1A4D2B0 266 aaPredicted RBP12.77□□□□□ -0.37
CTNND1-224ENST00000530068 PIK3CDO00329 1044 aa12.77□□□□□ -0.37
CTNND1-224ENST00000530068 MAFGO15525 162 aa12.77□□□□□ -0.37
CTNND1-224ENST00000530068 ST18O60284 1047 aa12.77□□□□□ -0.37
CTNND1-224ENST00000530068 KIF5BP33176 963 aa12.77□□□□□ -0.37
CTNND1-224ENST00000530068 MRPS6P82932 125 aaKnown RBP12.77□□□□□ -0.37
CTNND1-224ENST00000530068 UBE3AQ05086 875 aa12.77□□□□□ -0.37
CTNND1-224ENST00000530068 COASYQ13057 564 aa12.77□□□□□ -0.37
CTNND1-224ENST00000530068 RUFY4Q6ZNE9 571 aa12.77□□□□□ -0.37
CTNND1-224ENST00000530068 CYB5R4Q7L1T6 521 aa12.77□□□□□ -0.37
CTNND1-224ENST00000530068 SMRP1Q8NCR6 262 aa12.77□□□□□ -0.37
CTNND1-224ENST00000530068 SPPL3Q8TCT6 385 aa12.77□□□□□ -0.37
CTNND1-224ENST00000530068 DNAJB3Q8WWF6 145 aa12.77□□□□□ -0.37
CTNND1-224ENST00000530068 RRP36Q96EU6 259 aaKnown RBP12.77□□□□□ -0.37
CTNND1-224ENST00000530068 MAP3K14Q99558 947 aa12.77□□□□□ -0.37
CTNND1-224ENST00000530068 LZTS2Q9BRK4 669 aa12.77□□□□□ -0.37
CTNND1-224ENST00000530068 SEC63Q9UGP8 760 aaKnown RBP12.77□□□□□ -0.37
CTNND1-224ENST00000530068 LOC730098B7Z3J9 87 aa12.76□□□□□ -0.37
CTNND1-224ENST00000530068 CYTH3O43739 400 aa12.76□□□□□ -0.37
CTNND1-224ENST00000530068 ITGB1P05556 798 aa12.76□□□□□ -0.37
CTNND1-224ENST00000530068 SMARCA1P28370 1054 aa12.76□□□□□ -0.37
CTNND1-224ENST00000530068 GNAQP50148 359 aa12.76□□□□□ -0.37
CTNND1-224ENST00000530068 ZXDAP98168 799 aa12.76□□□□□ -0.37
CTNND1-224ENST00000530068 TROAPQ12815 778 aa12.76□□□□□ -0.37
CTNND1-224ENST00000530068 CBX2Q14781 532 aaPredicted RBP12.76□□□□□ -0.37
CTNND1-224ENST00000530068 SLC35G1Q2M3R5 365 aa12.76□□□□□ -0.37
CTNND1-224ENST00000530068 ODR4Q5SWX8 454 aa12.76□□□□□ -0.37
CTNND1-224ENST00000530068 FBXL6Q8N531 539 aa12.76□□□□□ -0.37
CTNND1-224ENST00000530068 POF1BQ8WVV4 589 aa12.76□□□□□ -0.37
CTNND1-224ENST00000530068 CDCA3Q99618 268 aaPredicted RBP12.76□□□□□ -0.37
CTNND1-224ENST00000530068 PHF7Q9BWX1 381 aaPredicted RBP12.76□□□□□ -0.37
CTNND1-224ENST00000530068 SPZ1Q9BXG8 430 aa12.76□□□□□ -0.37
CTNND1-224ENST00000530068 AAASQ9NRG9 546 aa12.76□□□□□ -0.37
CTNND1-224ENST00000530068 LRFN2Q9ULH4 789 aa12.76□□□□□ -0.37
CTNND1-224ENST00000530068 MRPL42Q9Y6G3 142 aaKnown RBP12.76□□□□□ -0.37
CTNND1-224ENST00000530068 MYH7BA7E2Y1 1941 aa12.76□□□□□ -0.37
CTNND1-224ENST00000530068 LINC01565O15544 149 aa12.75□□□□□ -0.37
CTNND1-224ENST00000530068 TECTAO75443 2155 aa12.75□□□□□ -0.37
CTNND1-224ENST00000530068 SRGAP2BP0DMP2 458 aa12.75□□□□□ -0.37
CTNND1-224ENST00000530068 SCG2P13521 617 aa12.75□□□□□ -0.37
CTNND1-224ENST00000530068 ATF7P17544 494 aaPredicted RBP12.75□□□□□ -0.37
CTNND1-224ENST00000530068 CD52P31358 61 aa12.75□□□□□ -0.37
CTNND1-224ENST00000530068 GTF2F1P35269 517 aaKnown RBP eCLIP12.75□□□□□ -0.37
CTNND1-224ENST00000530068 NRIP1P48552 1158 aa12.75□□□□□ -0.37
CTNND1-224ENST00000530068 NUCB1Q02818 461 aa12.75□□□□□ -0.37
CTNND1-224ENST00000530068 CAMK1Q14012 370 aa12.75□□□□□ -0.37
CTNND1-224ENST00000530068 PDE12Q6L8Q7 609 aaKnown RBP12.75□□□□□ -0.37
CTNND1-224ENST00000530068 B4GALNT3Q6L9W6 998 aa12.75□□□□□ -0.37
CTNND1-224ENST00000530068 USP17L6PQ6QN14 398 aa12.75□□□□□ -0.37
CTNND1-224ENST00000530068 NME8Q8N427 588 aa12.75□□□□□ -0.37
CTNND1-224ENST00000530068 KLHL23Q8NBE8 558 aa12.75□□□□□ -0.37
CTNND1-224ENST00000530068 NCOA7Q8NI08 942 aa12.75□□□□□ -0.37
CTNND1-224ENST00000530068 CTCFLQ8NI51 663 aaPredicted RBP12.75□□□□□ -0.37
CTNND1-224ENST00000530068 RUFY2Q8WXA3 655 aa12.75□□□□□ -0.37
CTNND1-224ENST00000530068 AZI2Q9H6S1 392 aa12.75□□□□□ -0.37
CTNND1-224ENST00000530068 TLE6Q9H808 572 aa12.75□□□□□ -0.37
CTNND1-224ENST00000530068 PCDHB12Q9Y5F1 795 aa12.75□□□□□ -0.37
CTNND1-224ENST00000530068 TRPV2Q9Y5S1 764 aa12.75□□□□□ -0.37
CTNND1-224ENST00000530068 GSTTP1A0A1W2PQM5 241 aa12.74□□□□□ -0.37
CTNND1-224ENST00000530068 CSPG5O95196 566 aa12.74□□□□□ -0.37
CTNND1-224ENST00000530068 KCNA2P16389 499 aa12.74□□□□□ -0.37
CTNND1-224ENST00000530068 MARK3P27448 753 aa12.74□□□□□ -0.37
CTNND1-224ENST00000530068 NUBP1P53384 320 aa12.74□□□□□ -0.37
CTNND1-224ENST00000530068 SIGLEC14Q08ET2 396 aa12.74□□□□□ -0.37
CTNND1-224ENST00000530068 PAK2Q13177 524 aa12.74□□□□□ -0.37
CTNND1-224ENST00000530068 MARCH8Q5T0T0 291 aa12.74□□□□□ -0.37
CTNND1-224ENST00000530068 PRSS33Q8NF86 280 aa12.74□□□□□ -0.37
CTNND1-224ENST00000530068 MICAL1Q8TDZ2 1067 aa12.74□□□□□ -0.37
CTNND1-224ENST00000530068 PIBF1Q8WXW3 757 aa12.74□□□□□ -0.37
CTNND1-224ENST00000530068 SNX27Q96L92 541 aa12.74□□□□□ -0.37
CTNND1-224ENST00000530068 PSTPIP2Q9H939 334 aa12.74□□□□□ -0.37
CTNND1-224ENST00000530068 AGO3Q9H9G7 860 aaKnown RBP12.74□□□□□ -0.37
CTNND1-224ENST00000530068 CLEC1BQ9P126 229 aa12.74□□□□□ -0.37
CTNND1-224ENST00000530068 PADI3Q9ULW8 664 aa12.74□□□□□ -0.37
CTNND1-224ENST00000530068 USP15Q9Y4E8 981 aaPredicted RBP12.74□□□□□ -0.37
CTNND1-224ENST00000530068 SUPT16HQ9Y5B9 1047 aaKnown RBP12.74□□□□□ -0.37
CTNND1-224ENST00000530068 RALGAPA2Q2PPJ7 1873 aa12.74□□□□□ -0.37
CTNND1-224ENST00000530068 PTPRZ1P23471 2315 aaPredicted RBP12.73□□□□□ -0.37
CTNND1-224ENST00000530068 TTC3P53804 2025 aa12.73□□□□□ -0.37
CTNND1-224ENST00000530068 KDM3AQ9Y4C1 1321 aa12.73□□□□□ -0.37
CTNND1-224ENST00000530068 MYH6P13533 1939 aa12.73□□□□□ -0.37
CTNND1-224ENST00000530068 SPDYE3A6NKU9 549 aa12.73□□□□□ -0.37
CTNND1-224ENST00000530068 MEIS2O14770 477 aa12.73□□□□□ -0.37
CTNND1-224ENST00000530068 DDAH1O94760 285 aa12.73□□□□□ -0.37
CTNND1-224ENST00000530068 INSRRP14616 1297 aa12.73□□□□□ -0.37
CTNND1-224ENST00000530068 IGBP1P78318 339 aa12.73□□□□□ -0.37
CTNND1-224ENST00000530068 MTMR1Q13613 665 aa12.73□□□□□ -0.37
CTNND1-224ENST00000530068 PAN2Q504Q3 1202 aaKnown RBP12.73□□□□□ -0.37
CTNND1-224ENST00000530068 SPOUT1Q5T280 376 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms