RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 PICALMQ13492 652 aa8.19□□□□□ -1.1
CAPRIN1-208ENST00000530008 GALEQ14376 348 aa8.19□□□□□ -1.1
CAPRIN1-208ENST00000530008 EPHA7Q15375 998 aa8.19□□□□□ -1.1
CAPRIN1-208ENST00000530008 B3GNT9Q6UX72 402 aa8.19□□□□□ -1.1
CAPRIN1-208ENST00000530008 LZTR1Q8N653 840 aa8.19□□□□□ -1.1
CAPRIN1-208ENST00000530008 RTF1Q92541 710 aaKnown RBP8.19□□□□□ -1.1
CAPRIN1-208ENST00000530008 SYTL4Q96C24 671 aaPredicted RBP8.19□□□□□ -1.1
CAPRIN1-208ENST00000530008 IL17RAQ96F46 866 aa8.19□□□□□ -1.1
CAPRIN1-208ENST00000530008 ZNF496Q96IT1 587 aaPredicted RBP8.19□□□□□ -1.1
CAPRIN1-208ENST00000530008 ARPC5LQ9BPX5 153 aa8.19□□□□□ -1.1
CAPRIN1-208ENST00000530008 C1orf112Q9NSG2 853 aa8.19□□□□□ -1.1
CAPRIN1-208ENST00000530008 MSRAQ9UJ68 235 aa8.19□□□□□ -1.1
CAPRIN1-208ENST00000530008 ANO9A1A5B4 782 aa8.18□□□□□ -1.1
CAPRIN1-208ENST00000530008 CYP26A1O43174 497 aa8.18□□□□□ -1.1
CAPRIN1-208ENST00000530008 AP1G1O43747 822 aa8.18□□□□□ -1.1
CAPRIN1-208ENST00000530008 IGLV1-40P01703 118 aa8.18□□□□□ -1.1
CAPRIN1-208ENST00000530008 TMEM253P0C7T8 217 aa8.18□□□□□ -1.1
CAPRIN1-208ENST00000530008 ENPP1P22413 925 aa8.18□□□□□ -1.1
CAPRIN1-208ENST00000530008 GATA4P43694 442 aa8.18□□□□□ -1.1
CAPRIN1-208ENST00000530008 COBLL1Q53SF7 1204 aa8.18□□□□□ -1.1
CAPRIN1-208ENST00000530008 KCTD1Q719H9 257 aa8.18□□□□□ -1.1
CAPRIN1-208ENST00000530008 SLC35G2Q8TBE7 412 aa8.18□□□□□ -1.1
CAPRIN1-208ENST00000530008 ASB11Q8WXH4 323 aa8.18□□□□□ -1.1
CAPRIN1-208ENST00000530008 LINC01599Q8WXQ3 324 aa8.18□□□□□ -1.1
CAPRIN1-208ENST00000530008 SSH1Q8WYL5 1049 aa8.18□□□□□ -1.1
CAPRIN1-208ENST00000530008 TTC17Q96AE7 1141 aa8.18□□□□□ -1.1
CAPRIN1-208ENST00000530008 HRASLS5Q96KN8 279 aa8.18□□□□□ -1.1
CAPRIN1-208ENST00000530008 C16orf92Q96LL3 132 aa8.18□□□□□ -1.1
CAPRIN1-208ENST00000530008 SLC12A5Q9H2X9 1139 aa8.18□□□□□ -1.1
CAPRIN1-208ENST00000530008 MAN1C1Q9NR34 630 aa8.18□□□□□ -1.1
CAPRIN1-208ENST00000530008 USP36Q9P275 1121 aaKnown RBP8.18□□□□□ -1.1
CAPRIN1-208ENST00000530008 FBLN5Q9UBX5 448 aa8.18□□□□□ -1.1
CAPRIN1-208ENST00000530008 NUB1Q9Y5A7 615 aa8.18□□□□□ -1.1
CAPRIN1-208ENST00000530008 APAF1O14727 1248 aa8.17□□□□□ -1.1
CAPRIN1-208ENST00000530008 PHKG2P15735 406 aa8.17□□□□□ -1.1
CAPRIN1-208ENST00000530008 AGXTP21549 392 aa8.17□□□□□ -1.1
CAPRIN1-208ENST00000530008 SDHAP31040 664 aa8.17□□□□□ -1.1
CAPRIN1-208ENST00000530008 GJA4P35212 333 aa8.17□□□□□ -1.1
CAPRIN1-208ENST00000530008 KIR2DL1P43626 348 aaPredicted RBP8.17□□□□□ -1.1
CAPRIN1-208ENST00000530008 KIR2DL2P43627 348 aaPredicted RBP8.17□□□□□ -1.1
CAPRIN1-208ENST00000530008 FNTBP49356 437 aa8.17□□□□□ -1.1
CAPRIN1-208ENST00000530008 SRSF2Q01130 221 aaKnown RBP8.17□□□□□ -1.1
CAPRIN1-208ENST00000530008 SAFBQ15424 915 aaKnown RBP eCLIP8.17□□□□□ -1.1
CAPRIN1-208ENST00000530008 FSCN1Q16658 493 aaKnown RBP8.17□□□□□ -1.1
CAPRIN1-208ENST00000530008 EMC4Q5J8M3 183 aa8.17□□□□□ -1.1
CAPRIN1-208ENST00000530008 CATSPEREQ5SY80 951 aa8.17□□□□□ -1.1
CAPRIN1-208ENST00000530008 STEAP3Q658P3 488 aa8.17□□□□□ -1.1
CAPRIN1-208ENST00000530008 CYB5RLQ6IPT4 315 aa8.17□□□□□ -1.1
CAPRIN1-208ENST00000530008 CYP4F22Q6NT55 531 aa8.17□□□□□ -1.1
CAPRIN1-208ENST00000530008 CXorf67Q86X51 503 aaPredicted RBP8.17□□□□□ -1.1
CAPRIN1-208ENST00000530008 TAAR9Q96RI9 348 aa8.17□□□□□ -1.1
CAPRIN1-208ENST00000530008 CSRNP2Q9H175 543 aa8.17□□□□□ -1.1
CAPRIN1-208ENST00000530008 DDX21Q9NR30 783 aaKnown RBP eCLIP8.17□□□□□ -1.1
CAPRIN1-208ENST00000530008 ZNF277Q9NRM2 450 aaPredicted RBP8.17□□□□□ -1.1
CAPRIN1-208ENST00000530008 ZC3H7BQ9UGR2 993 aaKnown RBP8.17□□□□□ -1.1
CAPRIN1-208ENST00000530008 EBF1Q9UH73 591 aa8.17□□□□□ -1.1
CAPRIN1-208ENST00000530008 FAM50BQ9Y247 325 aa8.17□□□□□ -1.1
CAPRIN1-208ENST00000530008 GPR45Q9Y5Y3 372 aa8.17□□□□□ -1.1
CAPRIN1-208ENST00000530008 IFRD1O00458 451 aaPredicted RBP8.16□□□□□ -1.1
CAPRIN1-208ENST00000530008 SLC27A2O14975 620 aa8.16□□□□□ -1.1
CAPRIN1-208ENST00000530008 GSC2O15499 205 aa8.16□□□□□ -1.1
CAPRIN1-208ENST00000530008 BUB1BO60566 1050 aaPredicted RBP8.16□□□□□ -1.1
CAPRIN1-208ENST00000530008 MAFKO60675 156 aa8.16□□□□□ -1.1
CAPRIN1-208ENST00000530008 OFD1O75665 1012 aa8.16□□□□□ -1.1
CAPRIN1-208ENST00000530008 MTNR1BP49286 362 aa8.16□□□□□ -1.1
CAPRIN1-208ENST00000530008 EPHA5P54756 1037 aa8.16□□□□□ -1.1
CAPRIN1-208ENST00000530008 ADCY1Q08828 1119 aa8.16□□□□□ -1.1
CAPRIN1-208ENST00000530008 DUSP4Q13115 394 aa8.16□□□□□ -1.1
CAPRIN1-208ENST00000530008 MOGSQ13724 837 aa8.16□□□□□ -1.1
CAPRIN1-208ENST00000530008 MORC3Q14149 939 aa8.16□□□□□ -1.1
CAPRIN1-208ENST00000530008 TOR2AQ5JU69 321 aa8.16□□□□□ -1.1
CAPRIN1-208ENST00000530008 RBM12BQ8IXT5 1001 aaKnown RBP8.16□□□□□ -1.1
CAPRIN1-208ENST00000530008 ASIC4Q96FT7 647 aa8.16□□□□□ -1.1
CAPRIN1-208ENST00000530008 QRSL1Q9H0R6 528 aaKnown RBP8.16□□□□□ -1.1
CAPRIN1-208ENST00000530008 SMOC1Q9H4F8 434 aa8.16□□□□□ -1.1
CAPRIN1-208ENST00000530008 KCNG1Q9UIX4 513 aa8.16□□□□□ -1.1
CAPRIN1-208ENST00000530008 TELO2Q9Y4R8 837 aa8.16□□□□□ -1.1
CAPRIN1-208ENST00000530008 A0A1W2PQ27 194 aa8.15□□□□□ -1.1
CAPRIN1-208ENST00000530008 A0A1W2PQ64 194 aa8.15□□□□□ -1.1
CAPRIN1-208ENST00000530008 A0A1W2PQC6 194 aa8.15□□□□□ -1.1
CAPRIN1-208ENST00000530008 A0A1W2PQD8 194 aa8.15□□□□□ -1.1
CAPRIN1-208ENST00000530008 FAM90A27PA6NNH2 459 aa8.15□□□□□ -1.1
CAPRIN1-208ENST00000530008 CTNND1O60716 968 aaKnown RBP8.15□□□□□ -1.1
CAPRIN1-208ENST00000530008 USP2O75604 605 aaPredicted RBP8.15□□□□□ -1.1
CAPRIN1-208ENST00000530008 C4BPAP04003 597 aaKnown RBP8.15□□□□□ -1.1
CAPRIN1-208ENST00000530008 NTRK1P04629 796 aa8.15□□□□□ -1.1
CAPRIN1-208ENST00000530008 PTPN1P18031 435 aaKnown RBP8.15□□□□□ -1.1
CAPRIN1-208ENST00000530008 C5AR1P21730 350 aa8.15□□□□□ -1.1
CAPRIN1-208ENST00000530008 PDE6BP35913 854 aa8.15□□□□□ -1.1
CAPRIN1-208ENST00000530008 ADKP55263 362 aaKnown RBP8.15□□□□□ -1.1
CAPRIN1-208ENST00000530008 RTP1P59025 263 aa8.15□□□□□ -1.1
CAPRIN1-208ENST00000530008 PRKCQQ04759 706 aa8.15□□□□□ -1.1
CAPRIN1-208ENST00000530008 ZNF267Q14586 743 aaPredicted RBP8.15□□□□□ -1.1
CAPRIN1-208ENST00000530008 CHRNA2Q15822 529 aa8.15□□□□□ -1.1
CAPRIN1-208ENST00000530008 AOC3Q16853 763 aa8.15□□□□□ -1.1
CAPRIN1-208ENST00000530008 HSF5Q4G112 596 aaPredicted RBP8.15□□□□□ -1.1
CAPRIN1-208ENST00000530008 CT83Q5H943 113 aa8.15□□□□□ -1.1
CAPRIN1-208ENST00000530008 C10orf62Q5T681 223 aaPredicted RBP8.15□□□□□ -1.1
CAPRIN1-208ENST00000530008 BTBD8Q5XKL5 378 aa8.15□□□□□ -1.1
CAPRIN1-208ENST00000530008 NME9Q86XW9 330 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms