RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 LIFRP42702 1097 aa9.17□□□□□ -0.94
CTNND1-221ENST00000529873 FKBP3Q00688 224 aaKnown RBP9.17□□□□□ -0.94
CTNND1-221ENST00000529873 THOC5Q13769 683 aaKnown RBP9.17□□□□□ -0.94
CTNND1-221ENST00000529873 SLFN12LQ6IEE8 588 aa9.17□□□□□ -0.94
CTNND1-221ENST00000529873 CFAP36Q96G28 342 aa9.17□□□□□ -0.94
CTNND1-221ENST00000529873 FEM1BQ9UK73 627 aa9.17□□□□□ -0.94
CTNND1-221ENST00000529873 STK36Q9NRP7 1315 aa9.17□□□□□ -0.94
CTNND1-221ENST00000529873 RFX7Q2KHR2 1363 aa9.17□□□□□ -0.94
CTNND1-221ENST00000529873 SOWAHDA6NJG2 315 aa9.17□□□□□ -0.94
CTNND1-221ENST00000529873 H7C1W4 665 aa9.17□□□□□ -0.94
CTNND1-221ENST00000529873 TTC4O95801 387 aa9.17□□□□□ -0.94
CTNND1-221ENST00000529873 BAG2O95816 211 aa9.17□□□□□ -0.94
CTNND1-221ENST00000529873 SYF2O95926 243 aaKnown RBP9.17□□□□□ -0.94
CTNND1-221ENST00000529873 DDIT3P35638 169 aa9.17□□□□□ -0.94
CTNND1-221ENST00000529873 IRX1P78414 480 aaPredicted RBP9.17□□□□□ -0.94
CTNND1-221ENST00000529873 TFAMQ00059 246 aaKnown RBP9.17□□□□□ -0.94
CTNND1-221ENST00000529873 RASGRF1Q13972 1273 aa9.17□□□□□ -0.94
CTNND1-221ENST00000529873 CTTNQ14247 550 aaKnown RBP9.17□□□□□ -0.94
CTNND1-221ENST00000529873 CIAPIN1Q6FI81 312 aa9.17□□□□□ -0.94
CTNND1-221ENST00000529873 MB21D1Q8N884 522 aa9.17□□□□□ -0.94
CTNND1-221ENST00000529873 DEPDC1BQ8WUY9 529 aa9.17□□□□□ -0.94
CTNND1-221ENST00000529873 RCOR1Q9UKL0 485 aa9.17□□□□□ -0.94
CTNND1-221ENST00000529873 MRFAP1Q9Y605 127 aa9.17□□□□□ -0.94
CTNND1-221ENST00000529873 STX1BP61266 288 aa9.16□□□□□ -0.94
CTNND1-221ENST00000529873 PDE1BQ01064 536 aa9.16□□□□□ -0.94
CTNND1-221ENST00000529873 TMEM179Q6ZVK1 233 aa9.16□□□□□ -0.94
CTNND1-221ENST00000529873 FOXP4Q8IVH2 680 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-221ENST00000529873 GIMAP8Q8ND71 665 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-221ENST00000529873 HEXIM2Q96MH2 286 aaKnown RBP9.16□□□□□ -0.94
CTNND1-221ENST00000529873 NRKQ7Z2Y5 1582 aa9.16□□□□□ -0.94
CTNND1-221ENST00000529873 UNC13BO14795 1591 aa9.16□□□□□ -0.94
CTNND1-221ENST00000529873 NEDD4P46934 1319 aa9.16□□□□□ -0.94
CTNND1-221ENST00000529873 ESYT2A0FGR8 921 aa9.16□□□□□ -0.94
CTNND1-221ENST00000529873 SART1O43290 800 aaKnown RBP9.16□□□□□ -0.94
CTNND1-221ENST00000529873 LRRN2O75325 713 aa9.16□□□□□ -0.94
CTNND1-221ENST00000529873 SUN1O94901 812 aa9.16□□□□□ -0.94
CTNND1-221ENST00000529873 XPAP23025 273 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-221ENST00000529873 PHEXP78562 749 aa9.16□□□□□ -0.94
CTNND1-221ENST00000529873 NR5A1Q13285 461 aa9.16□□□□□ -0.94
CTNND1-221ENST00000529873 OR6B2Q6IFH4 312 aa9.16□□□□□ -0.94
CTNND1-221ENST00000529873 SIX6OS1Q8N1H7 587 aa9.16□□□□□ -0.94
CTNND1-221ENST00000529873 MSTO1Q9BUK6 570 aa9.16□□□□□ -0.94
CTNND1-221ENST00000529873 EPB41L5Q9HCM4 733 aa9.16□□□□□ -0.94
CTNND1-221ENST00000529873 NRBP1Q9UHY1 535 aa9.16□□□□□ -0.94
CTNND1-221ENST00000529873 TPX2Q9ULW0 747 aaKnown RBP9.16□□□□□ -0.94
CTNND1-221ENST00000529873 MYO3BQ8WXR4 1341 aa9.16□□□□□ -0.94
CTNND1-221ENST00000529873 PRPSAP2O60256 369 aa9.16□□□□□ -0.94
CTNND1-221ENST00000529873 EVI5O60447 810 aa9.16□□□□□ -0.94
CTNND1-221ENST00000529873 MYL3P08590 195 aa9.16□□□□□ -0.94
CTNND1-221ENST00000529873 SNAP25P60880 206 aa9.16□□□□□ -0.94
CTNND1-221ENST00000529873 TBC1D10BQ4KMP7 808 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-221ENST00000529873 ANKRD20A4Q4UJ75 823 aa9.16□□□□□ -0.94
CTNND1-221ENST00000529873 ANKRD20A8PQ5CZ79 823 aa9.16□□□□□ -0.94
CTNND1-221ENST00000529873 ANKRD20A2Q5SQ80 823 aa9.16□□□□□ -0.94
CTNND1-221ENST00000529873 ANKRD20A1Q5TYW2 823 aa9.16□□□□□ -0.94
CTNND1-221ENST00000529873 CCDC197Q8NCU1 140 aa9.16□□□□□ -0.94
CTNND1-221ENST00000529873 TTC1Q99614 292 aa9.16□□□□□ -0.94
CTNND1-221ENST00000529873 SMYD2Q9NRG4 433 aa9.16□□□□□ -0.94
CTNND1-221ENST00000529873 SRP68Q9UHB9 627 aaKnown RBP9.16□□□□□ -0.94
CTNND1-221ENST00000529873 WDR19Q8NEZ3 1342 aa9.16□□□□□ -0.94
CTNND1-221ENST00000529873 GOLGA8SH3BPF8 625 aa9.16□□□□□ -0.94
CTNND1-221ENST00000529873 LDHAP00338 332 aaKnown RBP9.16□□□□□ -0.94
CTNND1-221ENST00000529873 SNCBQ16143 134 aa9.16□□□□□ -0.94
CTNND1-221ENST00000529873 ICE2Q659A1 982 aa9.16□□□□□ -0.94
CTNND1-221ENST00000529873 PI16Q6UXB8 463 aa9.16□□□□□ -0.94
CTNND1-221ENST00000529873 RYBPQ8N488 228 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-221ENST00000529873 INTS9Q9NV88 658 aaKnown RBP9.16□□□□□ -0.94
CTNND1-221ENST00000529873 FAM8A1Q9UBU6 413 aa9.16□□□□□ -0.94
CTNND1-221ENST00000529873 RAD17O75943 681 aa9.16□□□□□ -0.94
CTNND1-221ENST00000529873 SERPINB6P35237 376 aa9.16□□□□□ -0.94
CTNND1-221ENST00000529873 ATP6V1E1P36543 226 aa9.16□□□□□ -0.94
CTNND1-221ENST00000529873 EIF4A3P38919 411 aaKnown RBP9.16□□□□□ -0.94
CTNND1-221ENST00000529873 ZBED6P86452 979 aa9.16□□□□□ -0.94
CTNND1-221ENST00000529873 CLEC4GQ6UXB4 293 aa9.16□□□□□ -0.94
CTNND1-221ENST00000529873 RNF207Q6ZRF8 634 aa9.16□□□□□ -0.94
CTNND1-221ENST00000529873 MIGA2Q7L4E1 593 aa9.16□□□□□ -0.94
CTNND1-221ENST00000529873 SRRM1Q8IYB3 904 aaKnown RBP9.16□□□□□ -0.94
CTNND1-221ENST00000529873 CCNYQ8ND76 341 aa9.16□□□□□ -0.94
CTNND1-221ENST00000529873 ACRBPQ8NEB7 543 aa9.16□□□□□ -0.94
CTNND1-221ENST00000529873 DRC3Q9H069 523 aa9.16□□□□□ -0.94
CTNND1-221ENST00000529873 PNMA3Q9UL41 463 aa9.16□□□□□ -0.94
CTNND1-221ENST00000529873 ZNF521Q96K83 1311 aa9.15□□□□□ -0.94
CTNND1-221ENST00000529873 CYP2D7A0A087X1C5 515 aa9.15□□□□□ -0.94
CTNND1-221ENST00000529873 PLEKHA8P1O95397 391 aa9.15□□□□□ -0.94
CTNND1-221ENST00000529873 MCAMP43121 646 aa9.15□□□□□ -0.94
CTNND1-221ENST00000529873 PRELPP51888 382 aa9.15□□□□□ -0.94
CTNND1-221ENST00000529873 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.15□□□□□ -0.945e-6■■■□□ 16.7
CTNND1-221ENST00000529873 CNOT10Q9H9A5 744 aaKnown RBP9.15□□□□□ -0.94
CTNND1-221ENST00000529873 ATP6V0A4Q9HBG4 840 aa9.15□□□□□ -0.94
CTNND1-221ENST00000529873 BAG5Q9UL15 447 aa9.15□□□□□ -0.94
CTNND1-221ENST00000529873 SCINQ9Y6U3 715 aa9.15□□□□□ -0.94
CTNND1-221ENST00000529873 ALKQ9UM73 1620 aa9.15□□□□□ -0.94
CTNND1-221ENST00000529873 PRR36Q9H6K5 1346 aa9.15□□□□□ -0.94
CTNND1-221ENST00000529873 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.15□□□□□ -0.94
CTNND1-221ENST00000529873 CRKP46108 304 aa9.15□□□□□ -0.94
CTNND1-221ENST00000529873 DYNLT1P63172 113 aa9.15□□□□□ -0.94
CTNND1-221ENST00000529873 TNFAIP2Q03169 654 aa9.15□□□□□ -0.94
CTNND1-221ENST00000529873 ZNF449Q6P9G9 518 aa9.15□□□□□ -0.94
CTNND1-221ENST00000529873 ANKRD13CQ8N6S4 541 aa9.15□□□□□ -0.94
CTNND1-221ENST00000529873 CPSF3Q9UKF6 684 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms