RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 ACOT7O00154 380 aa6.54□□□□□ -1.36
C11orf88-204ENST00000529661 NOBOXO60393 691 aa6.54□□□□□ -1.36
C11orf88-204ENST00000529661 CYP7B1O75881 506 aa6.54□□□□□ -1.36
C11orf88-204ENST00000529661 ZNF28P17035 718 aa6.54□□□□□ -1.36
C11orf88-204ENST00000529661 PTPN1P18031 435 aaKnown RBP6.54□□□□□ -1.36
C11orf88-204ENST00000529661 IL13P35225 146 aa6.54□□□□□ -1.36
C11orf88-204ENST00000529661 GLRBP48167 497 aa6.54□□□□□ -1.36
C11orf88-204ENST00000529661 MLLT6P55198 1093 aaPredicted RBP6.54□□□□□ -1.36
C11orf88-204ENST00000529661 PTPROQ16827 1216 aa6.54□□□□□ -1.36
C11orf88-204ENST00000529661 SKIDA1Q1XH10 827 aa6.54□□□□□ -1.36
C11orf88-204ENST00000529661 DALRD3Q5D0E6 543 aaKnown RBP6.54□□□□□ -1.36
C11orf88-204ENST00000529661 FIGNQ5HY92 759 aa6.54□□□□□ -1.36
C11orf88-204ENST00000529661 CD276Q5ZPR3 534 aa6.54□□□□□ -1.36
C11orf88-204ENST00000529661 TRMT10BQ6PF06 316 aaKnown RBP6.54□□□□□ -1.36
C11orf88-204ENST00000529661 FRMD5Q7Z6J6 570 aa6.54□□□□□ -1.36
C11orf88-204ENST00000529661 DTX3Q8N9I9 347 aa6.54□□□□□ -1.36
C11orf88-204ENST00000529661 RELTQ969Z4 430 aa6.54□□□□□ -1.36
C11orf88-204ENST00000529661 SPC25Q9HBM1 224 aa6.54□□□□□ -1.36
C11orf88-204ENST00000529661 SMURF1Q9HCE7 757 aa6.54□□□□□ -1.36
C11orf88-204ENST00000529661 DLL4Q9NR61 685 aa6.54□□□□□ -1.36
C11orf88-204ENST00000529661 TCRBV16S1A1N1A0A5B0 115 aa6.53□□□□□ -1.36
C11orf88-204ENST00000529661 FAM90A27PA6NNH2 459 aa6.53□□□□□ -1.36
C11orf88-204ENST00000529661 ZNF561-AS1K7EIQ3 104 aa6.53□□□□□ -1.36
C11orf88-204ENST00000529661 PLD2O14939 933 aa6.53□□□□□ -1.36
C11orf88-204ENST00000529661 FBXO21O94952 628 aa6.53□□□□□ -1.36
C11orf88-204ENST00000529661 CYP1A1P04798 512 aaPredicted RBP6.53□□□□□ -1.36
C11orf88-204ENST00000529661 MASP1P48740 699 aa6.53□□□□□ -1.36
C11orf88-204ENST00000529661 PFKPQ01813 784 aa6.53□□□□□ -1.36
C11orf88-204ENST00000529661 FILIP1Q7Z7B0 1213 aa6.53□□□□□ -1.36
C11orf88-204ENST00000529661 TXNDC5Q8NBS9 432 aaKnown RBP6.53□□□□□ -1.36
C11orf88-204ENST00000529661 TEPSINQ96N21 525 aa6.53□□□□□ -1.36
C11orf88-204ENST00000529661 TRIM39Q9HCM9 518 aa6.53□□□□□ -1.36
C11orf88-204ENST00000529661 ZFP69BQ9UJL9 534 aa6.53□□□□□ -1.36
C11orf88-204ENST00000529661 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.52□□□□□ -1.37
C11orf88-204ENST00000529661 DNAJC6O75061 913 aa6.52□□□□□ -1.37
C11orf88-204ENST00000529661 CNR2P34972 360 aa6.52□□□□□ -1.37
C11orf88-204ENST00000529661 FAM26FQ5R3K3 315 aa6.52□□□□□ -1.37
C11orf88-204ENST00000529661 UBXN11Q5T124 520 aa6.52□□□□□ -1.37
C11orf88-204ENST00000529661 FERMT3Q86UX7 667 aa6.52□□□□□ -1.37
C11orf88-204ENST00000529661 FAM124AQ86V42 546 aa6.52□□□□□ -1.37
C11orf88-204ENST00000529661 IGSF22Q8N9C0 903 aa6.52□□□□□ -1.37
C11orf88-204ENST00000529661 ZCCHC14Q8WYQ9 949 aaKnown RBP6.52□□□□□ -1.37
C11orf88-204ENST00000529661 CELF4Q9BZC1 486 aaKnown RBP6.52□□□□□ -1.37
C11orf88-204ENST00000529661 PDGFDQ9GZP0 370 aaPredicted RBP6.52□□□□□ -1.37
C11orf88-204ENST00000529661 SLC39A2Q9NP94 309 aa6.52□□□□□ -1.37
C11orf88-204ENST00000529661 ARHGAP20Q9P2F6 1191 aa6.52□□□□□ -1.37
C11orf88-204ENST00000529661 ARHGAP28Q9P2N2 729 aa6.52□□□□□ -1.37
C11orf88-204ENST00000529661 CD2APQ9Y5K6 639 aa6.52□□□□□ -1.37
C11orf88-204ENST00000529661 PRAMEF25A6NGN4 478 aa6.51□□□□□ -1.37
C11orf88-204ENST00000529661 MROH6A6NGR9 719 aa6.51□□□□□ -1.37
C11orf88-204ENST00000529661 ZNF839A8K0R7 811 aa6.51□□□□□ -1.37
C11orf88-204ENST00000529661 KCNQ2O43526 872 aa6.51□□□□□ -1.37
C11orf88-204ENST00000529661 PRICKLE3O43900 615 aaPredicted RBP6.51□□□□□ -1.37
C11orf88-204ENST00000529661 RFPL3O75679 317 aa6.51□□□□□ -1.37
C11orf88-204ENST00000529661 ENO2P09104 434 aaPredicted RBP6.51□□□□□ -1.37
C11orf88-204ENST00000529661 GJA4P35212 333 aa6.51□□□□□ -1.37
C11orf88-204ENST00000529661 TAF7LQ5H9L4 462 aa6.51□□□□□ -1.37
C11orf88-204ENST00000529661 CPZQ66K79 652 aa6.51□□□□□ -1.37
C11orf88-204ENST00000529661 ABHD17CQ6PCB6 329 aa6.51□□□□□ -1.37
C11orf88-204ENST00000529661 STPG3Q8N7X2 389 aa6.51□□□□□ -1.37
C11orf88-204ENST00000529661 LCORQ96JN0 433 aaPredicted RBP6.51□□□□□ -1.37
C11orf88-204ENST00000529661 CLUHP3Q96NS8 147 aa6.51□□□□□ -1.37
C11orf88-204ENST00000529661 TMEM168Q9H0V1 697 aa6.51□□□□□ -1.37
C11orf88-204ENST00000529661 FTSJ1Q9UET6 329 aa6.51□□□□□ -1.37
C11orf88-204ENST00000529661 PLAAQ9Y263 795 aa6.51□□□□□ -1.37
C11orf88-204ENST00000529661 DUSP10Q9Y6W6 482 aa6.51□□□□□ -1.37
C11orf88-204ENST00000529661 NCANO14594 1321 aa6.5□□□□□ -1.37
C11orf88-204ENST00000529661 SCDO00767 359 aa6.5□□□□□ -1.37
C11orf88-204ENST00000529661 FOXD2O60548 495 aaPredicted RBP6.5□□□□□ -1.37
C11orf88-204ENST00000529661 LACTBP83111 547 aaPredicted RBP6.5□□□□□ -1.37
C11orf88-204ENST00000529661 KIAA2012Q0VF49 1180 aa6.5□□□□□ -1.37
C11orf88-204ENST00000529661 DBPQ10586 325 aaPredicted RBP6.5□□□□□ -1.37
C11orf88-204ENST00000529661 BORAQ6PGQ7 559 aa6.5□□□□□ -1.37
C11orf88-204ENST00000529661 ZCRB1Q8TBF4 217 aaKnown RBP6.5□□□□□ -1.37
C11orf88-204ENST00000529661 IGDCC4Q8TDY8 1250 aa6.5□□□□□ -1.37
C11orf88-204ENST00000529661 NINJ1Q92982 152 aa6.5□□□□□ -1.37
C11orf88-204ENST00000529661 NOP58Q9Y2X3 529 aaKnown RBP6.5□□□□□ -1.37
C11orf88-204ENST00000529661 B8ZZF3 427 aa6.49□□□□□ -1.37
C11orf88-204ENST00000529661 PRRG2O14669 202 aa6.49□□□□□ -1.37
C11orf88-204ENST00000529661 VIL1P09327 827 aaKnown RBP6.49□□□□□ -1.37
C11orf88-204ENST00000529661 SYN1P17600 705 aa6.49□□□□□ -1.37
C11orf88-204ENST00000529661 IBSPP21815 317 aaPredicted RBP6.49□□□□□ -1.37
C11orf88-204ENST00000529661 SMAD2Q15796 467 aaKnown RBP6.49□□□□□ -1.37
C11orf88-204ENST00000529661 FNDC3BQ53EP0 1204 aaKnown RBP6.49□□□□□ -1.37
C11orf88-204ENST00000529661 TMEM177Q53S58 311 aa6.49□□□□□ -1.37
C11orf88-204ENST00000529661 ERICH6BQ5W0A0 696 aa6.49□□□□□ -1.37
C11orf88-204ENST00000529661 FSTL4Q6MZW2 842 aa6.49□□□□□ -1.37
C11orf88-204ENST00000529661 HHIPL2Q6UWX4 724 aa6.49□□□□□ -1.37
C11orf88-204ENST00000529661 OVCH1Q7RTY7 1134 aa6.49□□□□□ -1.37
C11orf88-204ENST00000529661 C2orf69Q8N8R5 385 aa6.49□□□□□ -1.37
C11orf88-204ENST00000529661 YTHDC1Q96MU7 727 aaKnown RBP6.49□□□□□ -1.37
C11orf88-204ENST00000529661 TACO1Q9BSH4 297 aaKnown RBP6.49□□□□□ -1.37
C11orf88-204ENST00000529661 BDH2Q9BUT1 245 aa6.49□□□□□ -1.37
C11orf88-204ENST00000529661 PCDH12Q9NPG4 1184 aa6.49□□□□□ -1.37
C11orf88-204ENST00000529661 C9orf118A6NHY6 69 aa6.48□□□□□ -1.37
C11orf88-204ENST00000529661 OPA1O60313 960 aa6.48□□□□□ -1.37
C11orf88-204ENST00000529661 CLASP2O75122 1294 aaKnown RBP6.48□□□□□ -1.37
C11orf88-204ENST00000529661 C4BPAP04003 597 aaKnown RBP6.48□□□□□ -1.37
C11orf88-204ENST00000529661 KCNA6P17658 529 aa6.48□□□□□ -1.37
C11orf88-204ENST00000529661 SEC23AQ15436 765 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms