RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 DAXXQ9UER7 740 aaPredicted RBP9.9□□□□□ -0.82
SSBP3-212ENST00000528930 ZHX1Q9UKY1 873 aaPredicted RBP9.9□□□□□ -0.82
SSBP3-212ENST00000528930 SUPT20HL2P0C7V6 817 aa9.89□□□□□ -0.83
SSBP3-212ENST00000528930 PDHBP11177 359 aa9.89□□□□□ -0.83
SSBP3-212ENST00000528930 CCDC144BQ3MJ40 725 aa9.89□□□□□ -0.83
SSBP3-212ENST00000528930 EPC2Q52LR7 807 aa9.89□□□□□ -0.83
SSBP3-212ENST00000528930 BMP2KLQ5H9B9 411 aa9.89□□□□□ -0.83
SSBP3-212ENST00000528930 TTBK2Q6IQ55 1244 aa9.89□□□□□ -0.83
SSBP3-212ENST00000528930 KCNG4Q8TDN1 519 aa9.89□□□□□ -0.83
SSBP3-212ENST00000528930 CCDC136Q96JN2 1154 aa9.89□□□□□ -0.83
SSBP3-212ENST00000528930 FTOQ9C0B1 505 aaKnown RBP eCLIP9.89□□□□□ -0.83
SSBP3-212ENST00000528930 PRR12Q9ULL5 1215 aa9.89□□□□□ -0.83
SSBP3-212ENST00000528930 MTMR7Q9Y216 660 aa9.89□□□□□ -0.83
SSBP3-212ENST00000528930 TAF6LQ9Y6J9 622 aa9.89□□□□□ -0.83
SSBP3-212ENST00000528930 KIAA1671Q9BY89 1806 aa9.89□□□□□ -0.83
SSBP3-212ENST00000528930 DNAJC25-GNG10A0A024R161 153 aa9.88□□□□□ -0.83
SSBP3-212ENST00000528930 ZBTB24O43167 697 aaPredicted RBP9.88□□□□□ -0.83
SSBP3-212ENST00000528930 ZIC2O95409 532 aaPredicted RBP9.88□□□□□ -0.83
SSBP3-212ENST00000528930 SLC16A2P36021 539 aa9.88□□□□□ -0.83
SSBP3-212ENST00000528930 CLCN5P51795 746 aa9.88□□□□□ -0.83
SSBP3-212ENST00000528930 SNAP25P60880 206 aa9.88□□□□□ -0.83
SSBP3-212ENST00000528930 ZNF543Q08ER8 600 aa9.88□□□□□ -0.83
SSBP3-212ENST00000528930 GPM6BQ13491 265 aa9.88□□□□□ -0.83
SSBP3-212ENST00000528930 ACVR2BQ13705 512 aa9.88□□□□□ -0.83
SSBP3-212ENST00000528930 ANGPT1Q15389 498 aa9.88□□□□□ -0.83
SSBP3-212ENST00000528930 CCDC96Q2M329 555 aa9.88□□□□□ -0.83
SSBP3-212ENST00000528930 CCDC178Q5BJE1 867 aa9.88□□□□□ -0.83
SSBP3-212ENST00000528930 RNF19BQ6ZMZ0 732 aa9.88□□□□□ -0.83
SSBP3-212ENST00000528930 STOX1Q6ZVD7 989 aa9.88□□□□□ -0.83
SSBP3-212ENST00000528930 CYB5R4Q7L1T6 521 aa9.88□□□□□ -0.83
SSBP3-212ENST00000528930 IQCA1Q86XH1 822 aa9.88□□□□□ -0.83
SSBP3-212ENST00000528930 DCLK2Q8N568 766 aa9.88□□□□□ -0.83
SSBP3-212ENST00000528930 ENAHQ8N8S7 591 aaPredicted RBP9.88□□□□□ -0.83
SSBP3-212ENST00000528930 CYP2W1Q8TAV3 490 aa9.88□□□□□ -0.83
SSBP3-212ENST00000528930 ZSCAN10Q96SZ4 725 aaPredicted RBP9.88□□□□□ -0.83
SSBP3-212ENST00000528930 PHF7Q9BWX1 381 aaPredicted RBP9.88□□□□□ -0.83
SSBP3-212ENST00000528930 KRT23Q9C075 422 aa9.88□□□□□ -0.83
SSBP3-212ENST00000528930 LSG1Q9H089 658 aaKnown RBP9.88□□□□□ -0.83
SSBP3-212ENST00000528930 CNNM2Q9H8M5 875 aa9.88□□□□□ -0.83
SSBP3-212ENST00000528930 TRMT13Q9NUP7 481 aaKnown RBP9.88□□□□□ -0.83
SSBP3-212ENST00000528930 ISY1Q9ULR0 285 aaKnown RBP9.88□□□□□ -0.83
SSBP3-212ENST00000528930 CTDP1Q9Y5B0 961 aaPredicted RBP9.88□□□□□ -0.83
SSBP3-212ENST00000528930 HELZ2Q9BYK8 2649 aaKnown RBP9.87□□□□□ -0.83
SSBP3-212ENST00000528930 FRMPD2Q68DX3 1309 aaPredicted RBP9.87□□□□□ -0.83
SSBP3-212ENST00000528930 CYSRT1A8MQ03 144 aa9.87□□□□□ -0.83
SSBP3-212ENST00000528930 E7EWF7 191 aa9.87□□□□□ -0.83
SSBP3-212ENST00000528930 LINC01565O15544 149 aa9.87□□□□□ -0.83
SSBP3-212ENST00000528930 ZZEF1O43149 2961 aa9.87□□□□□ -0.83
SSBP3-212ENST00000528930 SNRPBP14678 240 aaKnown RBP9.87□□□□□ -0.83
SSBP3-212ENST00000528930 PSMC6P62333 389 aa9.87□□□□□ -0.83
SSBP3-212ENST00000528930 HTRA4P83105 476 aaPredicted RBP9.87□□□□□ -0.83
SSBP3-212ENST00000528930 COASYQ13057 564 aa9.87□□□□□ -0.83
SSBP3-212ENST00000528930 IKQ13123 557 aaPredicted RBP9.87□□□□□ -0.83
SSBP3-212ENST00000528930 COL9A3Q14050 684 aaPredicted RBP9.87□□□□□ -0.83
SSBP3-212ENST00000528930 SEC23AQ15436 765 aa9.87□□□□□ -0.83
SSBP3-212ENST00000528930 ERICH6BQ5W0A0 696 aa9.87□□□□□ -0.83
SSBP3-212ENST00000528930 BRICD5Q6PL45 260 aa9.87□□□□□ -0.83
SSBP3-212ENST00000528930 CCDC105Q8IYK2 499 aa9.87□□□□□ -0.83
SSBP3-212ENST00000528930 PNMA1Q8ND90 353 aa9.87□□□□□ -0.83
SSBP3-212ENST00000528930 CHST13Q8NET6 341 aa9.87□□□□□ -0.83
SSBP3-212ENST00000528930 ESYT1Q9BSJ8 1104 aa9.87□□□□□ -0.83
SSBP3-212ENST00000528930 KATNBL1Q9H079 304 aa9.87□□□□□ -0.83
SSBP3-212ENST00000528930 RANBP17Q9H2T7 1088 aaKnown RBP9.87□□□□□ -0.83
SSBP3-212ENST00000528930 ABHD16BQ9H3Z7 469 aa9.87□□□□□ -0.83
SSBP3-212ENST00000528930 GPCPD1Q9NPB8 672 aa9.87□□□□□ -0.83
SSBP3-212ENST00000528930 FBXO40Q9UH90 709 aa9.87□□□□□ -0.83
SSBP3-212ENST00000528930 RBM8AQ9Y5S9 174 aaKnown RBP9.87□□□□□ -0.83
SSBP3-212ENST00000528930 SMPD1P17405 629 aa9.86□□□□□ -0.83
SSBP3-212ENST00000528930 GCGRP47871 477 aa9.86□□□□□ -0.83
SSBP3-212ENST00000528930 SMCPP49901 116 aaPredicted RBP9.86□□□□□ -0.83
SSBP3-212ENST00000528930 ADAM15Q13444 863 aa9.86□□□□□ -0.83
SSBP3-212ENST00000528930 GPNMBQ14956 572 aa9.86□□□□□ -0.83
SSBP3-212ENST00000528930 LCE2CQ5TA81 110 aa9.86□□□□□ -0.83
SSBP3-212ENST00000528930 SYDE2Q5VT97 1194 aa9.86□□□□□ -0.83
SSBP3-212ENST00000528930 CWF19L1Q69YN2 538 aaKnown RBP9.86□□□□□ -0.83
SSBP3-212ENST00000528930 DDX11Q96FC9 970 aa9.86□□□□□ -0.83
SSBP3-212ENST00000528930 FGD4Q96M96 766 aa9.86□□□□□ -0.83
SSBP3-212ENST00000528930 TRERF1Q96PN7 1200 aa9.86□□□□□ -0.83
SSBP3-212ENST00000528930 HINFPQ9BQA5 517 aa9.86□□□□□ -0.83
SSBP3-212ENST00000528930 RTKNQ9BST9 563 aa9.86□□□□□ -0.83
SSBP3-212ENST00000528930 A1CFQ9NQ94 594 aaKnown RBP9.86□□□□□ -0.83
SSBP3-212ENST00000528930 HOMER2Q9NSB8 354 aa9.86□□□□□ -0.83
SSBP3-212ENST00000528930 RNF146Q9NTX7 359 aa9.86□□□□□ -0.83
SSBP3-212ENST00000528930 INSL6Q9Y581 213 aa9.86□□□□□ -0.83
SSBP3-212ENST00000528930 FRYQ5TBA9 3013 aa9.85□□□□□ -0.83
SSBP3-212ENST00000528930 DCDC2BA2VCK2 349 aa9.85□□□□□ -0.83
SSBP3-212ENST00000528930 J3QL48 77 aa9.85□□□□□ -0.83
SSBP3-212ENST00000528930 ICAM1P05362 532 aa9.85□□□□□ -0.83
SSBP3-212ENST00000528930 GOLGA8HP0CJ92 632 aa9.85□□□□□ -0.83
SSBP3-212ENST00000528930 ALAS1P13196 640 aa9.85□□□□□ -0.83
SSBP3-212ENST00000528930 ATF7P17544 494 aaPredicted RBP9.85□□□□□ -0.83
SSBP3-212ENST00000528930 GTF2F1P35269 517 aaKnown RBP eCLIP9.85□□□□□ -0.83
SSBP3-212ENST00000528930 ANTXR2P58335 489 aa9.85□□□□□ -0.83
SSBP3-212ENST00000528930 NECTIN1Q15223 517 aa9.85□□□□□ -0.83
SSBP3-212ENST00000528930 FSCN1Q16658 493 aaKnown RBP9.85□□□□□ -0.83
SSBP3-212ENST00000528930 TCTN1Q2MV58 587 aa9.85□□□□□ -0.83
SSBP3-212ENST00000528930 TKFCQ3LXA3 575 aa9.85□□□□□ -0.83
SSBP3-212ENST00000528930 MUM1L1Q5H9M0 696 aa9.85□□□□□ -0.83
SSBP3-212ENST00000528930 GPATCH4Q5T3I0 446 aaKnown RBP9.85□□□□□ -0.83
SSBP3-212ENST00000528930 CNKSR3Q6P9H4 555 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms