RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 FAM160B1Q5W0V3 765 aa10.92□□□□□ -0.66
CHD7-208ENST00000528280 PLA2G4DQ86XP0 818 aa10.92□□□□□ -0.66
CHD7-208ENST00000528280 DHX38Q92620 1227 aaKnown RBP10.92□□□□□ -0.66
CHD7-208ENST00000528280 PHKBQ93100 1093 aa10.92□□□□□ -0.66
CHD7-208ENST00000528280 VWCEQ96DN2 955 aa10.92□□□□□ -0.66
CHD7-208ENST00000528280 ZBED2Q9BTP6 218 aa10.92□□□□□ -0.66
CHD7-208ENST00000528280 SLKQ9H2G2 1235 aaPredicted RBP10.92□□□□□ -0.66
CHD7-208ENST00000528280 TMEM260Q9NX78 707 aa10.92□□□□□ -0.66
CHD7-208ENST00000528280 IPO5O00410 1097 aaKnown RBP10.91□□□□□ -0.66
CHD7-208ENST00000528280 NBNO60934 754 aa10.91□□□□□ -0.66
CHD7-208ENST00000528280 ARP10275 920 aa10.91□□□□□ -0.66
CHD7-208ENST00000528280 CIITAP33076 1130 aa10.91□□□□□ -0.66
CHD7-208ENST00000528280 PBX2P40425 430 aa10.91□□□□□ -0.66
CHD7-208ENST00000528280 ACTR2P61160 394 aa10.91□□□□□ -0.66
CHD7-208ENST00000528280 ADAM17P78536 824 aa10.91□□□□□ -0.66
CHD7-208ENST00000528280 PPFIA1Q13136 1202 aa10.91□□□□□ -0.66
CHD7-208ENST00000528280 FAM26DQ5JW98 314 aa10.91□□□□□ -0.66
CHD7-208ENST00000528280 MIS18BP1Q6P0N0 1132 aa10.91□□□□□ -0.66
CHD7-208ENST00000528280 HERC6Q8IVU3 1022 aa10.91□□□□□ -0.66
CHD7-208ENST00000528280 NME8Q8N427 588 aa10.91□□□□□ -0.66
CHD7-208ENST00000528280 CYP2W1Q8TAV3 490 aa10.91□□□□□ -0.66
CHD7-208ENST00000528280 PPM1EQ8WY54 764 aa10.91□□□□□ -0.66
CHD7-208ENST00000528280 WASF1Q92558 559 aa10.91□□□□□ -0.66
CHD7-208ENST00000528280 SEPT8Q92599 483 aa10.91□□□□□ -0.66
CHD7-208ENST00000528280 APBB2Q92870 758 aa10.91□□□□□ -0.66
CHD7-208ENST00000528280 UPF3BQ9BZI7 483 aaKnown RBP10.91□□□□□ -0.66
CHD7-208ENST00000528280 TRIP12Q14669 1992 aaPredicted RBP10.9□□□□□ -0.66
CHD7-208ENST00000528280 GBF1Q92538 1859 aa10.9□□□□□ -0.66
CHD7-208ENST00000528280 TLL1O43897 1013 aa10.9□□□□□ -0.66
CHD7-208ENST00000528280 AMHP03971 560 aa10.9□□□□□ -0.66
CHD7-208ENST00000528280 BMP1P13497 986 aa10.9□□□□□ -0.66
CHD7-208ENST00000528280 GPNMBQ14956 572 aa10.9□□□□□ -0.66
CHD7-208ENST00000528280 GRIK4Q16099 956 aa10.9□□□□□ -0.66
CHD7-208ENST00000528280 PLEKHG4Q58EX7 1191 aa10.9□□□□□ -0.66
CHD7-208ENST00000528280 IER5Q5VY09 327 aa10.9□□□□□ -0.66
CHD7-208ENST00000528280 PPP2R2DQ66LE6 453 aa10.9□□□□□ -0.66
CHD7-208ENST00000528280 ZNF746Q6NUN9 644 aaPredicted RBP10.9□□□□□ -0.66
CHD7-208ENST00000528280 SMAP1Q8IYB5 467 aaPredicted RBP10.9□□□□□ -0.66
CHD7-208ENST00000528280 IL27Q8NEV9 243 aa10.9□□□□□ -0.66
CHD7-208ENST00000528280 LMBR1Q8WVP7 490 aa10.9□□□□□ -0.66
CHD7-208ENST00000528280 CRYGNQ8WXF5 182 aa10.9□□□□□ -0.66
CHD7-208ENST00000528280 PGBD1Q96JS3 809 aa10.9□□□□□ -0.66
CHD7-208ENST00000528280 NECAB3Q96P71 396 aaPredicted RBP10.9□□□□□ -0.66
CHD7-208ENST00000528280 RAD9AQ99638 391 aa10.9□□□□□ -0.66
CHD7-208ENST00000528280 ZNF577Q9BSK1 485 aa10.9□□□□□ -0.66
CHD7-208ENST00000528280 NKX2-4Q9H2Z4 354 aa10.9□□□□□ -0.66
CHD7-208ENST00000528280 EPHX3Q9H6B9 360 aa10.9□□□□□ -0.66
CHD7-208ENST00000528280 NCOA5Q9HCD5 579 aaKnown RBP10.9□□□□□ -0.66
CHD7-208ENST00000528280 PKD2L1Q9P0L9 805 aa10.9□□□□□ -0.66
CHD7-208ENST00000528280 PCDHA4Q9UN74 947 aa10.9□□□□□ -0.66
CHD7-208ENST00000528280 CHD9Q3L8U1 2897 aa10.9□□□□□ -0.67
CHD7-208ENST00000528280 KAT6AQ92794 2004 aa10.89□□□□□ -0.67
CHD7-208ENST00000528280 IGKV6D-21A0A0A0MT36 114 aa10.89□□□□□ -0.67
CHD7-208ENST00000528280 POTEB3A0JP26 581 aa10.89□□□□□ -0.67
CHD7-208ENST00000528280 MBLAC1A4D2B0 266 aaPredicted RBP10.89□□□□□ -0.67
CHD7-208ENST00000528280 FAM86B1E9PN63 330 aa10.89□□□□□ -0.67
CHD7-208ENST00000528280 M0QZ92 97 aa10.89□□□□□ -0.67
CHD7-208ENST00000528280 BACH1O14867 736 aa10.89□□□□□ -0.67
CHD7-208ENST00000528280 HBP1O60381 514 aa10.89□□□□□ -0.67
CHD7-208ENST00000528280 PFKFB2O60825 505 aa10.89□□□□□ -0.67
CHD7-208ENST00000528280 PSAPP07602 524 aa10.89□□□□□ -0.67
CHD7-208ENST00000528280 FAM86B2P0C5J1 330 aa10.89□□□□□ -0.67
CHD7-208ENST00000528280 RABGGTBP53611 331 aa10.89□□□□□ -0.67
CHD7-208ENST00000528280 WDR5P61964 334 aaKnown RBP10.89□□□□□ -0.67
CHD7-208ENST00000528280 KRT76Q01546 638 aa10.89□□□□□ -0.67
CHD7-208ENST00000528280 HIC1Q14526 733 aa10.89□□□□□ -0.67
CHD7-208ENST00000528280 TRAF7Q6Q0C0 670 aa10.89□□□□□ -0.67
CHD7-208ENST00000528280 POTEBQ6S5H4 581 aa10.89□□□□□ -0.67
CHD7-208ENST00000528280 ABHD15Q6UXT9 468 aa10.89□□□□□ -0.67
CHD7-208ENST00000528280 TRIM50Q86XT4 487 aa10.89□□□□□ -0.67
CHD7-208ENST00000528280 BLIDQ8IZY5 108 aa10.89□□□□□ -0.67
CHD7-208ENST00000528280 ZNF710Q8N1W2 664 aa10.89□□□□□ -0.67
CHD7-208ENST00000528280 IL17RAQ96F46 866 aa10.89□□□□□ -0.67
CHD7-208ENST00000528280 RIT2Q99578 217 aa10.89□□□□□ -0.67
CHD7-208ENST00000528280 NAP1L4Q99733 375 aaKnown RBP10.89□□□□□ -0.67
CHD7-208ENST00000528280 VPS54Q9P1Q0 977 aa10.89□□□□□ -0.67
CHD7-208ENST00000528280 TUBE1Q9UJT0 475 aa10.89□□□□□ -0.67
CHD7-208ENST00000528280 TRPC6Q9Y210 931 aa10.89□□□□□ -0.67
CHD7-208ENST00000528280 INSL6Q9Y581 213 aa10.89□□□□□ -0.67
CHD7-208ENST00000528280 PCDHA2Q9Y5H9 948 aa10.89□□□□□ -0.67
CHD7-208ENST00000528280 PCDHA10Q9Y5I2 948 aa10.89□□□□□ -0.67
CHD7-208ENST00000528280 SQORQ9Y6N5 450 aa10.89□□□□□ -0.67
CHD7-208ENST00000528280 IGLV3-22A0A075B6J6 115 aa10.88□□□□□ -0.67
CHD7-208ENST00000528280 DHX15O43143 795 aaKnown RBP10.88□□□□□ -0.67
CHD7-208ENST00000528280 INSRRP14616 1297 aa10.88□□□□□ -0.67
CHD7-208ENST00000528280 MARK3P27448 753 aa10.88□□□□□ -0.67
CHD7-208ENST00000528280 STK3Q13188 491 aa10.88□□□□□ -0.67
CHD7-208ENST00000528280 ITGB3BPQ13352 177 aaPredicted RBP10.88□□□□□ -0.67
CHD7-208ENST00000528280 PRR16Q569H4 304 aa10.88□□□□□ -0.67
CHD7-208ENST00000528280 ZNF484Q5JVG2 852 aa10.88□□□□□ -0.67
CHD7-208ENST00000528280 TMEM31Q5JXX7 168 aa10.88□□□□□ -0.67
CHD7-208ENST00000528280 ODR4Q5SWX8 454 aa10.88□□□□□ -0.67
CHD7-208ENST00000528280 MOXD1Q6UVY6 613 aa10.88□□□□□ -0.67
CHD7-208ENST00000528280 DAGLBQ8NCG7 672 aa10.88□□□□□ -0.67
CHD7-208ENST00000528280 DBF4BQ8NFT6 615 aa10.88□□□□□ -0.67
CHD7-208ENST00000528280 WNT8BQ93098 351 aa10.88□□□□□ -0.67
CHD7-208ENST00000528280 TSPYL2Q9H2G4 693 aaPredicted RBP10.88□□□□□ -0.67
CHD7-208ENST00000528280 ZNF302Q9NR11 478 aa10.88□□□□□ -0.67
CHD7-208ENST00000528280 NRBP2Q9NSY0 501 aa10.88□□□□□ -0.67
CHD7-208ENST00000528280 RNF216Q9NWF9 866 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms