RNA–Protein interactions for RNA: ENST00000528216.5

PGAP2-231, Transcript of post-GPI attachment to proteins 2, human

TSL 1 (best)

Gene PGAP2, Length 1,815 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PGAP2-231	ENST00000528216	GPBP1L1	Q9HC44	474 aa	Predicted RBP	11.27	□□□□□ -0.61
PGAP2-231	ENST00000528216	PLCB1	Q9NQ66	1216 aa		11.27	□□□□□ -0.61
PGAP2-231	ENST00000528216	TYW1	Q9NV66	732 aa	Known RBP	11.27	□□□□□ -0.61
PGAP2-231	ENST00000528216	POTEF	A5A3E0	1075 aa		11.26	□□□□□ -0.61
PGAP2-231	ENST00000528216	WDR46	O15213	610 aa	Known RBP	11.26	□□□□□ -0.61
PGAP2-231	ENST00000528216	PJA2	O43164	708 aa		11.26	□□□□□ -0.61
PGAP2-231	ENST00000528216	TACC1	O75410	805 aa		11.26	□□□□□ -0.61
PGAP2-231	ENST00000528216	PSMD10	O75832	226 aa		11.26	□□□□□ -0.61
PGAP2-231	ENST00000528216	ZRANB2	O95218	330 aa	Known RBP eCLIP	11.26	□□□□□ -0.61
PGAP2-231	ENST00000528216	POTEI	P0CG38	1075 aa		11.26	□□□□□ -0.61
PGAP2-231	ENST00000528216	JAG1	P78504	1218 aa		11.26	□□□□□ -0.61
PGAP2-231	ENST00000528216	AMPD2	Q01433	879 aa		11.26	□□□□□ -0.61
PGAP2-231	ENST00000528216	ADAM9	Q13443	819 aa		11.26	□□□□□ -0.61
PGAP2-231	ENST00000528216	RRP1B	Q14684	758 aa	Known RBP	11.26	□□□□□ -0.61
PGAP2-231	ENST00000528216	SHROOM1	Q2M3G4	852 aa	Predicted RBP	11.26	□□□□□ -0.61
PGAP2-231	ENST00000528216	SLC9C1	Q4G0N8	1177 aa		11.26	□□□□□ -0.61
PGAP2-231	ENST00000528216	CEP55	Q53EZ4	464 aa		11.26	□□□□□ -0.61
PGAP2-231	ENST00000528216	TEX35	Q5T0J7	233 aa		11.26	□□□□□ -0.61
PGAP2-231	ENST00000528216	FAM83B	Q5T0W9	1011 aa		11.26	□□□□□ -0.61
PGAP2-231	ENST00000528216	C10orf76	Q5T2E6	689 aa		11.26	□□□□□ -0.61
PGAP2-231	ENST00000528216	PDXDC1	Q6P996	788 aa		11.26	□□□□□ -0.61
PGAP2-231	ENST00000528216	POTEG	Q6S5H5	508 aa		11.26	□□□□□ -0.61
PGAP2-231	ENST00000528216	POTEE	Q6S8J3	1075 aa		11.26	□□□□□ -0.61
PGAP2-231	ENST00000528216	TRAPPC11	Q7Z392	1133 aa		11.26	□□□□□ -0.61
PGAP2-231	ENST00000528216	RNF10	Q8N5U6	811 aa	Known RBP	11.26	□□□□□ -0.61
PGAP2-231	ENST00000528216	GOLGA5	Q8TBA6	731 aa		11.26	□□□□□ -0.61
PGAP2-231	ENST00000528216	HOOK2	Q96ED9	719 aa		11.26	□□□□□ -0.61
PGAP2-231	ENST00000528216	NACC1	Q96RE7	527 aa		11.26	□□□□□ -0.61
PGAP2-231	ENST00000528216	HSD17B14	Q9BPX1	270 aa		11.26	□□□□□ -0.61
PGAP2-231	ENST00000528216	DEF6	Q9H4E7	631 aa		11.26	□□□□□ -0.61
PGAP2-231	ENST00000528216	TSKS	Q9UJT2	592 aa		11.26	□□□□□ -0.61
PGAP2-231	ENST00000528216	FBXL5	Q9UKA1	691 aa		11.26	□□□□□ -0.61
PGAP2-231	ENST00000528216	RAB21	Q9UL25	225 aa		11.26	□□□□□ -0.61
PGAP2-231	ENST00000528216	ODF2L	Q9ULJ1	636 aa		11.26	□□□□□ -0.61
PGAP2-231	ENST00000528216	GUCA1B	Q9UMX6	200 aa		11.26	□□□□□ -0.61
PGAP2-231	ENST00000528216	SAR1B	Q9Y6B6	198 aa		11.26	□□□□□ -0.61
PGAP2-231	ENST00000528216	BZW2	Q9Y6E2	419 aa	Known RBP	11.26	□□□□□ -0.61
PGAP2-231	ENST00000528216	GTPBP10	A4D1E9	387 aa	Known RBP	11.25	□□□□□ -0.61
PGAP2-231	ENST00000528216	RBAK-RBAKDN	I3L0D1	243 aa		11.25	□□□□□ -0.61
PGAP2-231	ENST00000528216	MEIS1	O00470	390 aa		11.25	□□□□□ -0.61
PGAP2-231	ENST00000528216	SERPING1	P05155	500 aa		11.25	□□□□□ -0.61
PGAP2-231	ENST00000528216	ICAM1	P05362	532 aa		11.25	□□□□□ -0.61
PGAP2-231	ENST00000528216	EPS15	P42566	896 aa		11.25	□□□□□ -0.61
PGAP2-231	ENST00000528216	HSD17B4	P51659	736 aa		11.25	□□□□□ -0.61
PGAP2-231	ENST00000528216	ITIH3	Q06033	890 aa		11.25	□□□□□ -0.61
PGAP2-231	ENST00000528216	ALCAM	Q13740	583 aa		11.25	□□□□□ -0.61
PGAP2-231	ENST00000528216	MYBPC2	Q14324	1141 aa		11.25	□□□□□ -0.61
PGAP2-231	ENST00000528216	EPHA7	Q15375	998 aa		11.25	□□□□□ -0.61
PGAP2-231	ENST00000528216	LRCH2	Q5VUJ6	765 aa		11.25	□□□□□ -0.61
PGAP2-231	ENST00000528216	OTOP1	Q7RTM1	612 aa		11.25	□□□□□ -0.61
PGAP2-231	ENST00000528216	BAP1	Q92560	729 aa		11.25	□□□□□ -0.61
PGAP2-231	ENST00000528216	ALS2CR12	Q96Q35	445 aa		11.25	□□□□□ -0.61
PGAP2-231	ENST00000528216	MKNK1	Q9BUB5	465 aa		11.25	□□□□□ -0.61
PGAP2-231	ENST00000528216	TANGO6	Q9C0B7	1094 aa		11.25	□□□□□ -0.61
PGAP2-231	ENST00000528216	NMRK2	Q9NPI5	230 aa		11.25	□□□□□ -0.61
PGAP2-231	ENST00000528216	ARMCX3	Q9UH62	379 aa	Predicted RBP	11.25	□□□□□ -0.61
PGAP2-231	ENST00000528216	JRKL	Q9Y4A0	524 aa		11.25	□□□□□ -0.61
PGAP2-231	ENST00000528216	CLRN2	A0PK11	232 aa		11.25	□□□□□ -0.61
PGAP2-231	ENST00000528216	AKR1B10	O60218	316 aa		11.25	□□□□□ -0.61
PGAP2-231	ENST00000528216	PPP1R12B	O60237	982 aa	Predicted RBP	11.25	□□□□□ -0.61
PGAP2-231	ENST00000528216	GAS7	O60861	476 aa		11.25	□□□□□ -0.61
PGAP2-231	ENST00000528216	CFB	P00751	764 aa		11.25	□□□□□ -0.61
PGAP2-231	ENST00000528216	STAT3	P40763	770 aa		11.25	□□□□□ -0.61
PGAP2-231	ENST00000528216	ZNF280A	P59817	542 aa	Predicted RBP	11.25	□□□□□ -0.61
PGAP2-231	ENST00000528216	LRRC41	Q15345	812 aa		11.25	□□□□□ -0.61
PGAP2-231	ENST00000528216	SFMBT2	Q5VUG0	894 aa		11.25	□□□□□ -0.61
PGAP2-231	ENST00000528216	PRPF38A	Q8NAV1	312 aa	Known RBP	11.25	□□□□□ -0.61
PGAP2-231	ENST00000528216	ZNF784	Q8NCA9	323 aa	Predicted RBP	11.25	□□□□□ -0.61
PGAP2-231	ENST00000528216	LRRN4CL	Q8ND94	238 aa		11.25	□□□□□ -0.61
PGAP2-231	ENST00000528216	ACER1	Q8TDN7	264 aa		11.25	□□□□□ -0.61
PGAP2-231	ENST00000528216	UBE2Q2	Q8WVN8	375 aa		11.25	□□□□□ -0.61
PGAP2-231	ENST00000528216	SECISBP2L	Q93073	1101 aa	Known RBP	11.25	□□□□□ -0.61
PGAP2-231	ENST00000528216	P2RX7	Q99572	595 aa	Known RBP	11.25	□□□□□ -0.61
PGAP2-231	ENST00000528216	REEP2	Q9BRK0	252 aa		11.25	□□□□□ -0.61
PGAP2-231	ENST00000528216	TIPIN	Q9BVW5	301 aa		11.25	□□□□□ -0.61
PGAP2-231	ENST00000528216	TEKT3	Q9BXF9	490 aa		11.25	□□□□□ -0.61
PGAP2-231	ENST00000528216	IFIH1	Q9BYX4	1025 aa	Known RBP	11.25	□□□□□ -0.61
PGAP2-231	ENST00000528216	IRX2	Q9BZI1	471 aa	Predicted RBP	11.25	□□□□□ -0.61
PGAP2-231	ENST00000528216	KIAA1683	Q9H0B3	1180 aa		11.25	□□□□□ -0.61
PGAP2-231	ENST00000528216	VEZT	Q9HBM0	779 aa		11.25	□□□□□ -0.61
PGAP2-231	ENST00000528216	AIPL1	Q9NZN9	384 aa		11.25	□□□□□ -0.61
PGAP2-231	ENST00000528216	PGAP2	Q9UHJ9	254 aa		11.25	□□□□□ -0.61
PGAP2-231	ENST00000528216	CNOT7	Q9UIV1	285 aa	Known RBP	11.25	□□□□□ -0.61
PGAP2-231	ENST00000528216	DICER1	Q9UPY3	1922 aa	Known RBP	11.24	□□□□□ -0.61
PGAP2-231	ENST00000528216	RBBP6	Q7Z6E9	1792 aa	Known RBP	11.24	□□□□□ -0.61
PGAP2-231	ENST00000528216	FAM13A	O94988	1023 aa		11.24	□□□□□ -0.61
PGAP2-231	ENST00000528216	SLURP2	P0DP57	97 aa		11.24	□□□□□ -0.61
PGAP2-231	ENST00000528216	MAPT	P10636	758 aa	Known RBP	11.24	□□□□□ -0.61
PGAP2-231	ENST00000528216	EPB41	P11171	864 aa	Known RBP	11.24	□□□□□ -0.61
PGAP2-231	ENST00000528216	NR2F2	P24468	414 aa		11.24	□□□□□ -0.61
PGAP2-231	ENST00000528216	ECE1	P42892	770 aa		11.24	□□□□□ -0.61
PGAP2-231	ENST00000528216	KIF11	P52732	1056 aa		11.24	□□□□□ -0.61
PGAP2-231	ENST00000528216	PABPC4	Q13310	644 aa	Known RBP eCLIP	11.24	□□□□□ -0.61	8e-7	■■□□□ 12
PGAP2-231	ENST00000528216	XRRA1	Q6P2D8	792 aa		11.24	□□□□□ -0.61
PGAP2-231	ENST00000528216	RRAGA	Q7L523	313 aa		11.24	□□□□□ -0.61
PGAP2-231	ENST00000528216	LDHD	Q86WU2	507 aa		11.24	□□□□□ -0.61
PGAP2-231	ENST00000528216	TMEM174	Q8WUU8	243 aa		11.24	□□□□□ -0.61
PGAP2-231	ENST00000528216	PARD6B	Q9BYG5	372 aa		11.24	□□□□□ -0.61
PGAP2-231	ENST00000528216	FAM207A	Q9NSI2	230 aa	Predicted RBP	11.24	□□□□□ -0.61
PGAP2-231	ENST00000528216	RNF14	Q9UBS8	474 aa		11.24	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms