RNA–Protein interactions for RNA: ENST00000527792.5

LTBP3-209, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 923 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-209ENST00000527792 CYP4A11Q02928 519 aa17.24■□□□□ 0.35
LTBP3-209ENST00000527792 HSDL1Q3SXM5 330 aa17.24■□□□□ 0.35
LTBP3-209ENST00000527792 UTP14CQ5TAP6 766 aaKnown RBP17.24■□□□□ 0.35
LTBP3-209ENST00000527792 MAP3K21Q5TCX8 1036 aa17.24■□□□□ 0.35
LTBP3-209ENST00000527792 RESP18Q5W5W9 173 aa17.24■□□□□ 0.35
LTBP3-209ENST00000527792 CCDC73Q6ZRK6 1079 aa17.24■□□□□ 0.35
LTBP3-209ENST00000527792 NECAB2Q7Z6G3 386 aa17.24■□□□□ 0.35
LTBP3-209ENST00000527792 SLC17A8Q8NDX2 589 aa17.24■□□□□ 0.35
LTBP3-209ENST00000527792 RDM1Q8NG50 284 aa17.24■□□□□ 0.35
LTBP3-209ENST00000527792 DIS3LQ8TF46 1054 aaKnown RBP17.24■□□□□ 0.35
LTBP3-209ENST00000527792 AFG1LQ8WV93 481 aa17.24■□□□□ 0.35
LTBP3-209ENST00000527792 DYDC2Q96IM9 177 aa17.24■□□□□ 0.35
LTBP3-209ENST00000527792 PLIN2Q99541 437 aa17.24■□□□□ 0.35
LTBP3-209ENST00000527792 EIF2AK1Q9BQI3 630 aaKnown RBP17.24■□□□□ 0.35
LTBP3-209ENST00000527792 PANK2Q9BZ23 570 aa17.24■□□□□ 0.35
LTBP3-209ENST00000527792 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.24■□□□□ 0.354e-8■□□□□ 9.9
LTBP3-209ENST00000527792 SPC25Q9HBM1 224 aa17.24■□□□□ 0.35
LTBP3-209ENST00000527792 GNEQ9Y223 722 aaKnown RBP17.24■□□□□ 0.35
LTBP3-209ENST00000527792 A0A1W2PPC1 479 aa17.23■□□□□ 0.35
LTBP3-209ENST00000527792 SOX1O00570 391 aaPredicted RBP17.23■□□□□ 0.35
LTBP3-209ENST00000527792 DUSP11O75319 330 aaKnown RBP17.23■□□□□ 0.35
LTBP3-209ENST00000527792 SUPT20HL2P0C7V6 817 aa17.23■□□□□ 0.35
LTBP3-209ENST00000527792 PFKFB1P16118 471 aa17.23■□□□□ 0.35
LTBP3-209ENST00000527792 TCF7P36402 384 aaPredicted RBP17.23■□□□□ 0.35
LTBP3-209ENST00000527792 MAPK8IP2Q13387 824 aaPredicted RBP17.23■□□□□ 0.35
LTBP3-209ENST00000527792 CTTNQ14247 550 aaKnown RBP17.23■□□□□ 0.35
LTBP3-209ENST00000527792 BRDTQ58F21 947 aaPredicted RBP17.23■□□□□ 0.35
LTBP3-209ENST00000527792 SWSAP1Q6NVH7 229 aa17.23■□□□□ 0.35
LTBP3-209ENST00000527792 B3GNT9Q6UX72 402 aa17.23■□□□□ 0.35
LTBP3-209ENST00000527792 TPH2Q8IWU9 490 aa17.23■□□□□ 0.35
LTBP3-209ENST00000527792 PDILTQ8N807 584 aa17.23■□□□□ 0.35
LTBP3-209ENST00000527792 BANK1Q8NDB2 785 aa17.23■□□□□ 0.35
LTBP3-209ENST00000527792 GPR20Q99678 358 aa17.23■□□□□ 0.35
LTBP3-209ENST00000527792 CCSER1Q9C0I3 900 aa17.23■□□□□ 0.35
LTBP3-209ENST00000527792 RGL1Q9NZL6 768 aa17.23■□□□□ 0.35
LTBP3-209ENST00000527792 GABBR1Q9UBS5 961 aa17.23■□□□□ 0.35
LTBP3-209ENST00000527792 DDX20Q9UHI6 824 aaKnown RBP17.23■□□□□ 0.35
LTBP3-209ENST00000527792 Q9Y3F1 56 aa17.23■□□□□ 0.35
LTBP3-209ENST00000527792 GSTTP1A0A1W2PQM5 241 aa17.22■□□□□ 0.35
LTBP3-209ENST00000527792 MED24O75448 989 aa17.22■□□□□ 0.35
LTBP3-209ENST00000527792 C6orf222P0C671 652 aaPredicted RBP17.22■□□□□ 0.35
LTBP3-209ENST00000527792 PTMSP20962 102 aa17.22■□□□□ 0.35
LTBP3-209ENST00000527792 KARSQ15046 597 aaKnown RBP17.22■□□□□ 0.35
LTBP3-209ENST00000527792 ABHD15Q6UXT9 468 aa17.22■□□□□ 0.35
LTBP3-209ENST00000527792 PPTC7Q8NI37 304 aa17.22■□□□□ 0.35
LTBP3-209ENST00000527792 NEK9Q8TD19 979 aa17.22■□□□□ 0.35
LTBP3-209ENST00000527792 EMID1Q96A84 441 aaPredicted RBP17.22■□□□□ 0.35
LTBP3-209ENST00000527792 LRCH3Q96II8 777 aa17.22■□□□□ 0.35
LTBP3-209ENST00000527792 GOLPH3LQ9H4A5 285 aa17.22■□□□□ 0.35
LTBP3-209ENST00000527792 AZI2Q9H6S1 392 aa17.22■□□□□ 0.35
LTBP3-209ENST00000527792 XPNPEP3Q9NQH7 507 aa17.22■□□□□ 0.35
LTBP3-209ENST00000527792 ZNF302Q9NR11 478 aa17.22■□□□□ 0.35
LTBP3-209ENST00000527792 KCNH3Q9ULD8 1083 aa17.22■□□□□ 0.35
LTBP3-209ENST00000527792 KDM3AQ9Y4C1 1321 aa17.21■□□□□ 0.35
LTBP3-209ENST00000527792 P4HBP07237 508 aaKnown RBP17.21■□□□□ 0.35
LTBP3-209ENST00000527792 SYKP43405 635 aa17.21■□□□□ 0.35
LTBP3-209ENST00000527792 CPT1AP50416 773 aa17.21■□□□□ 0.35
LTBP3-209ENST00000527792 NDUFA8P51970 172 aa17.21■□□□□ 0.35
LTBP3-209ENST00000527792 NFKBIBQ15653 356 aa17.21■□□□□ 0.35
LTBP3-209ENST00000527792 RRAGBQ5VZM2 374 aa17.21■□□□□ 0.35
LTBP3-209ENST00000527792 FAM160B1Q5W0V3 765 aa17.21■□□□□ 0.35
LTBP3-209ENST00000527792 TRMT1LQ7Z2T5 733 aaKnown RBP17.21■□□□□ 0.35
LTBP3-209ENST00000527792 CATSPER3Q86XQ3 398 aa17.21■□□□□ 0.35
LTBP3-209ENST00000527792 GLG1Q92896 1179 aa17.21■□□□□ 0.35
LTBP3-209ENST00000527792 DHX58Q96C10 678 aa17.21■□□□□ 0.35
LTBP3-209ENST00000527792 MMTAG2Q9BU76 263 aaKnown RBP17.21■□□□□ 0.35
LTBP3-209ENST00000527792 POLR3CQ9BUI4 534 aaPredicted RBP17.21■□□□□ 0.35
LTBP3-209ENST00000527792 TUFT1Q9NNX1 390 aa17.21■□□□□ 0.35
LTBP3-209ENST00000527792 KIAA1024Q9UPX6 916 aa17.21■□□□□ 0.35
LTBP3-209ENST00000527792 POTEB3A0JP26 581 aa17.2■□□□□ 0.34
LTBP3-209ENST00000527792 DLL1O00548 723 aa17.2■□□□□ 0.34
LTBP3-209ENST00000527792 POLR2DO15514 142 aaKnown RBP17.2■□□□□ 0.34
LTBP3-209ENST00000527792 MSCO60682 206 aa17.2■□□□□ 0.34
LTBP3-209ENST00000527792 DKC1O60832 514 aaKnown RBP eCLIP17.2■□□□□ 0.34
LTBP3-209ENST00000527792 SLITRK3O94933 977 aa17.2■□□□□ 0.34
LTBP3-209ENST00000527792 ATG7O95352 703 aa17.2■□□□□ 0.34
LTBP3-209ENST00000527792 PGK1P00558 417 aa17.2■□□□□ 0.34
LTBP3-209ENST00000527792 MMP3P08254 477 aa17.2■□□□□ 0.34
LTBP3-209ENST00000527792 MYL3P08590 195 aa17.2■□□□□ 0.34
LTBP3-209ENST00000527792 RPA1P27694 616 aa17.2■□□□□ 0.34
LTBP3-209ENST00000527792 STAT6P42226 847 aa17.2■□□□□ 0.34
LTBP3-209ENST00000527792 QARSP47897 775 aaKnown RBP17.2■□□□□ 0.34
LTBP3-209ENST00000527792 PSMC5P62195 406 aa17.2■□□□□ 0.34
LTBP3-209ENST00000527792 BEX3Q00994 111 aa17.2■□□□□ 0.34
LTBP3-209ENST00000527792 DGKDQ16760 1214 aa17.2■□□□□ 0.34
LTBP3-209ENST00000527792 PDXDC2PQ6P474 469 aa17.2■□□□□ 0.34
LTBP3-209ENST00000527792 POTEBQ6S5H4 581 aa17.2■□□□□ 0.34
LTBP3-209ENST00000527792 CKAP2LQ8IYA6 745 aa17.2■□□□□ 0.34
LTBP3-209ENST00000527792 C7orf61Q8IZ16 206 aa17.2■□□□□ 0.34
LTBP3-209ENST00000527792 ANKLE1Q8NAG6 615 aa17.2■□□□□ 0.34
LTBP3-209ENST00000527792 ATP6V0A1Q93050 837 aa17.2■□□□□ 0.34
LTBP3-209ENST00000527792 PNMA5Q96PV4 448 aa17.2■□□□□ 0.34
LTBP3-209ENST00000527792 LXNQ9BS40 222 aa17.2■□□□□ 0.34
LTBP3-209ENST00000527792 NT5C3AQ9H0P0 336 aa17.2■□□□□ 0.34
LTBP3-209ENST00000527792 ZSWIM4Q9H7M6 989 aa17.2■□□□□ 0.34
LTBP3-209ENST00000527792 DDX19AQ9NUU7 478 aaKnown RBP17.2■□□□□ 0.34
LTBP3-209ENST00000527792 ZMYND8Q9ULU4 1186 aaPredicted RBP17.2■□□□□ 0.34
LTBP3-209ENST00000527792 SYNRGQ9UMZ2 1314 aa17.2■□□□□ 0.34
LTBP3-209ENST00000527792 A0A087WWV3 80 aa17.19■□□□□ 0.34
LTBP3-209ENST00000527792 SLC26A4O43511 780 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms