RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 USP11P51784 963 aa12.8□□□□□ -0.36
LINC01001-201ENST00000526704 GUCY2DQ02846 1103 aa12.8□□□□□ -0.36
LINC01001-201ENST00000526704 DDR1Q08345 913 aa12.8□□□□□ -0.36
LINC01001-201ENST00000526704 CDC42EP5Q6NZY7 148 aa12.8□□□□□ -0.36
LINC01001-201ENST00000526704 GBP6Q6ZN66 633 aa12.8□□□□□ -0.36
LINC01001-201ENST00000526704 ETNPPLQ8TBG4 499 aa12.8□□□□□ -0.36
LINC01001-201ENST00000526704 CRAMP1Q96RY5 1269 aa12.8□□□□□ -0.36
LINC01001-201ENST00000526704 P2RX7Q99572 595 aaKnown RBP12.8□□□□□ -0.36
LINC01001-201ENST00000526704 DNAJC18Q9H819 358 aa12.8□□□□□ -0.36
LINC01001-201ENST00000526704 ANKRD65E5RJM6 399 aa12.8□□□□□ -0.36
LINC01001-201ENST00000526704 CETN3O15182 167 aa12.8□□□□□ -0.36
LINC01001-201ENST00000526704 EIF3HO15372 352 aaKnown RBP eCLIP12.8□□□□□ -0.36
LINC01001-201ENST00000526704 KRT18P05783 430 aaKnown RBP12.8□□□□□ -0.36
LINC01001-201ENST00000526704 HOXD13P35453 343 aa12.8□□□□□ -0.36
LINC01001-201ENST00000526704 SCNN1DP51172 638 aa12.8□□□□□ -0.36
LINC01001-201ENST00000526704 SHROOM1Q2M3G4 852 aaPredicted RBP12.8□□□□□ -0.36
LINC01001-201ENST00000526704 CASKIN2Q8WXE0 1202 aa12.8□□□□□ -0.36
LINC01001-201ENST00000526704 CRYGNQ8WXF5 182 aa12.8□□□□□ -0.36
LINC01001-201ENST00000526704 RUFY1Q96T51 708 aa12.8□□□□□ -0.36
LINC01001-201ENST00000526704 KRT12Q99456 494 aa12.8□□□□□ -0.36
LINC01001-201ENST00000526704 COA1Q9GZY4 146 aa12.8□□□□□ -0.36
LINC01001-201ENST00000526704 ZHX3Q9H4I2 956 aa12.8□□□□□ -0.36
LINC01001-201ENST00000526704 EPB41L5Q9HCM4 733 aa12.8□□□□□ -0.36
LINC01001-201ENST00000526704 PCDHA1Q9Y5I3 950 aa12.8□□□□□ -0.36
LINC01001-201ENST00000526704 MYH11P35749 1972 aa12.8□□□□□ -0.36
LINC01001-201ENST00000526704 COL11A2P13942 1736 aaPredicted RBP12.8□□□□□ -0.36
LINC01001-201ENST00000526704 SLX4Q8IY92 1834 aa12.8□□□□□ -0.36
LINC01001-201ENST00000526704 BTNL10A8MVZ5 291 aa12.79□□□□□ -0.36
LINC01001-201ENST00000526704 PPEF1O14829 653 aaPredicted RBP12.79□□□□□ -0.36
LINC01001-201ENST00000526704 MAGEA9P43362 315 aa12.79□□□□□ -0.36
LINC01001-201ENST00000526704 PSMC6P62333 389 aa12.79□□□□□ -0.36
LINC01001-201ENST00000526704 GNGT1P63211 74 aa12.79□□□□□ -0.36
LINC01001-201ENST00000526704 SKOR1P84550 965 aa12.79□□□□□ -0.36
LINC01001-201ENST00000526704 PTK2Q05397 1052 aa12.79□□□□□ -0.36
LINC01001-201ENST00000526704 NFIAQ12857 509 aa12.79□□□□□ -0.36
LINC01001-201ENST00000526704 PAK2Q13177 524 aa12.79□□□□□ -0.36
LINC01001-201ENST00000526704 GIT2Q14161 759 aa12.79□□□□□ -0.36
LINC01001-201ENST00000526704 CDC37Q16543 378 aaPredicted RBP12.79□□□□□ -0.36
LINC01001-201ENST00000526704 EPM2AIP1Q7L775 607 aaPredicted RBP12.79□□□□□ -0.36
LINC01001-201ENST00000526704 ZNF571Q7Z3V5 609 aaPredicted RBP12.79□□□□□ -0.36
LINC01001-201ENST00000526704 IRF2BP2Q7Z5L9 587 aa12.79□□□□□ -0.36
LINC01001-201ENST00000526704 CATSPER3Q86XQ3 398 aa12.79□□□□□ -0.36
LINC01001-201ENST00000526704 SLFN12Q8IYM2 578 aa12.79□□□□□ -0.36
LINC01001-201ENST00000526704 CCDC43Q96MW1 224 aaKnown RBP12.79□□□□□ -0.36
LINC01001-201ENST00000526704 GLT8D2Q9H1C3 349 aa12.79□□□□□ -0.36
LINC01001-201ENST00000526704 MEIS2O14770 477 aa12.79□□□□□ -0.36
LINC01001-201ENST00000526704 SLC9A1P19634 815 aa12.79□□□□□ -0.36
LINC01001-201ENST00000526704 DNAJC21Q5F1R6 531 aaKnown RBP12.79□□□□□ -0.36
LINC01001-201ENST00000526704 MOXD1Q6UVY6 613 aa12.79□□□□□ -0.36
LINC01001-201ENST00000526704 FRMD5Q7Z6J6 570 aa12.79□□□□□ -0.36
LINC01001-201ENST00000526704 SFR1Q86XK3 245 aa12.79□□□□□ -0.36
LINC01001-201ENST00000526704 MREGQ8N565 214 aa12.79□□□□□ -0.36
LINC01001-201ENST00000526704 USP38Q8NB14 1042 aa12.79□□□□□ -0.36
LINC01001-201ENST00000526704 IFT81Q8WYA0 676 aa12.79□□□□□ -0.36
LINC01001-201ENST00000526704 PIK3R5Q8WYR1 880 aa12.79□□□□□ -0.36
LINC01001-201ENST00000526704 REEP2Q9BRK0 252 aa12.79□□□□□ -0.36
LINC01001-201ENST00000526704 PLCB1Q9NQ66 1216 aa12.79□□□□□ -0.36
LINC01001-201ENST00000526704 TMEM59LQ9UK28 342 aa12.79□□□□□ -0.36
LINC01001-201ENST00000526704 TRAF3IP3Q9Y228 551 aa12.79□□□□□ -0.36
LINC01001-201ENST00000526704 ZNF233A6NK53 670 aa12.78□□□□□ -0.36
LINC01001-201ENST00000526704 CLSTN1O94985 981 aa12.78□□□□□ -0.36
LINC01001-201ENST00000526704 HLA-DOAP06340 250 aa12.78□□□□□ -0.36
LINC01001-201ENST00000526704 SPATA31C1P0DKV0 1188 aa12.78□□□□□ -0.36
LINC01001-201ENST00000526704 MYBP10242 640 aa12.78□□□□□ -0.36
LINC01001-201ENST00000526704 TRADDQ15628 312 aa12.78□□□□□ -0.36
LINC01001-201ENST00000526704 ZFPM1Q8IX07 1006 aa12.78□□□□□ -0.36
LINC01001-201ENST00000526704 IQCKQ8N0W5 287 aa12.78□□□□□ -0.36
LINC01001-201ENST00000526704 LENG9Q96B70 501 aa12.78□□□□□ -0.36
LINC01001-201ENST00000526704 KLRG2A4D1S0 409 aaPredicted RBP12.78□□□□□ -0.36
LINC01001-201ENST00000526704 MEIS1O00470 390 aa12.78□□□□□ -0.36
LINC01001-201ENST00000526704 RAD51CO43502 376 aa12.78□□□□□ -0.36
LINC01001-201ENST00000526704 KRT14P02533 472 aa12.78□□□□□ -0.36
LINC01001-201ENST00000526704 AFPP02771 609 aaKnown RBP12.78□□□□□ -0.36
LINC01001-201ENST00000526704 UCHL3P15374 230 aa12.78□□□□□ -0.36
LINC01001-201ENST00000526704 CCT5P48643 541 aa12.78□□□□□ -0.36
LINC01001-201ENST00000526704 RNASE9P60153 205 aaKnown RBP12.78□□□□□ -0.36
LINC01001-201ENST00000526704 ARHGAP4P98171 946 aa12.78□□□□□ -0.36
LINC01001-201ENST00000526704 PABPC4Q13310 644 aaKnown RBP eCLIP12.78□□□□□ -0.36
LINC01001-201ENST00000526704 AP3B2Q13367 1082 aa12.78□□□□□ -0.36
LINC01001-201ENST00000526704 SKIDA1Q1XH10 827 aa12.78□□□□□ -0.36
LINC01001-201ENST00000526704 TTC19Q6DKK2 380 aaPredicted RBP12.78□□□□□ -0.36
LINC01001-201ENST00000526704 APOBEC3HQ6NTF7 200 aaKnown RBP12.78□□□□□ -0.36
LINC01001-201ENST00000526704 SP8Q8IXZ3 490 aa12.78□□□□□ -0.36
LINC01001-201ENST00000526704 SH2D3CQ8N5H7 860 aa12.78□□□□□ -0.36
LINC01001-201ENST00000526704 RBM46Q8TBY0 533 aaKnown RBP12.78□□□□□ -0.36
LINC01001-201ENST00000526704 DCAF4Q8WV16 495 aa12.78□□□□□ -0.36
LINC01001-201ENST00000526704 EFCC1Q9HA90 598 aa12.78□□□□□ -0.36
LINC01001-201ENST00000526704 ARMCX3Q9UH62 379 aaPredicted RBP12.78□□□□□ -0.36
LINC01001-201ENST00000526704 AJAP1Q9UKB5 411 aaPredicted RBP12.78□□□□□ -0.36
LINC01001-201ENST00000526704 SCN9AQ15858 1988 aa12.78□□□□□ -0.36
LINC01001-201ENST00000526704 EP400Q96L91 3159 aa12.78□□□□□ -0.36
LINC01001-201ENST00000526704 FAM196BA6NMK8 535 aa12.77□□□□□ -0.36
LINC01001-201ENST00000526704 POLRMTO00411 1230 aaKnown RBP12.77□□□□□ -0.36
LINC01001-201ENST00000526704 CES2O00748 559 aa12.77□□□□□ -0.36
LINC01001-201ENST00000526704 EEF2P13639 858 aaKnown RBP12.77□□□□□ -0.36
LINC01001-201ENST00000526704 PON1P27169 355 aa12.77□□□□□ -0.36
LINC01001-201ENST00000526704 GUCY2FP51841 1108 aa12.77□□□□□ -0.36
LINC01001-201ENST00000526704 SF3B2Q13435 895 aaKnown RBP12.77□□□□□ -0.36
LINC01001-201ENST00000526704 KNOP1Q1ED39 458 aaKnown RBP12.77□□□□□ -0.36
LINC01001-201ENST00000526704 PRR16Q569H4 304 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms