RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 PTGDRQ13258 359 aa14.57□□□□□ -0.08
SMPD1-202ENST00000526280 FAM160B1Q5W0V3 765 aa14.57□□□□□ -0.08
SMPD1-202ENST00000526280 MIER3Q7Z3K6 550 aa14.57□□□□□ -0.08
SMPD1-202ENST00000526280 FAM126BQ8IXS8 530 aa14.57□□□□□ -0.08
SMPD1-202ENST00000526280 C7orf31Q8N865 590 aa14.57□□□□□ -0.08
SMPD1-202ENST00000526280 TTC12Q9H892 705 aaPredicted RBP14.57□□□□□ -0.08
SMPD1-202ENST00000526280 ZNF302Q9NR11 478 aa14.57□□□□□ -0.08
SMPD1-202ENST00000526280 MAFBQ9Y5Q3 323 aaPredicted RBP14.57□□□□□ -0.08
SMPD1-202ENST00000526280 EML1O00423 815 aa14.56□□□□□ -0.08
SMPD1-202ENST00000526280 LAD1O00515 517 aa14.56□□□□□ -0.08
SMPD1-202ENST00000526280 CD4P01730 458 aa14.56□□□□□ -0.08
SMPD1-202ENST00000526280 ZSCAN22P10073 491 aaPredicted RBP14.56□□□□□ -0.08
SMPD1-202ENST00000526280 MARK3P27448 753 aa14.56□□□□□ -0.08
SMPD1-202ENST00000526280 SLC26A2P50443 739 aa14.56□□□□□ -0.08
SMPD1-202ENST00000526280 PKP1Q13835 747 aa14.56□□□□□ -0.08
SMPD1-202ENST00000526280 FAM47CQ5HY64 1035 aa14.56□□□□□ -0.08
SMPD1-202ENST00000526280 PDXDC2PQ6P474 469 aa14.56□□□□□ -0.08
SMPD1-202ENST00000526280 C7orf61Q8IZ16 206 aa14.56□□□□□ -0.08
SMPD1-202ENST00000526280 TRPV6Q9H1D0 765 aa14.56□□□□□ -0.08
SMPD1-202ENST00000526280 GABBR1Q9UBS5 961 aa14.56□□□□□ -0.08
SMPD1-202ENST00000526280 GTF2IRD1Q9UHL9 959 aa14.56□□□□□ -0.08
SMPD1-202ENST00000526280 NR2E3Q9Y5X4 410 aa14.56□□□□□ -0.08
SMPD1-202ENST00000526280 WDR81Q562E7 1941 aa14.55□□□□□ -0.08
SMPD1-202ENST00000526280 TLR3O15455 904 aaKnown RBP14.55□□□□□ -0.08
SMPD1-202ENST00000526280 B4GALT4O60513 344 aa14.55□□□□□ -0.08
SMPD1-202ENST00000526280 SMIM10L2AP0DMW4 78 aa14.55□□□□□ -0.08
SMPD1-202ENST00000526280 SMIM10L2BP0DMW5 78 aa14.55□□□□□ -0.08
SMPD1-202ENST00000526280 ATP4AP20648 1035 aa14.55□□□□□ -0.08
SMPD1-202ENST00000526280 HOXC8P31273 242 aa14.55□□□□□ -0.08
SMPD1-202ENST00000526280 PLCB4Q15147 1175 aa14.55□□□□□ -0.08
SMPD1-202ENST00000526280 GDF6Q6KF10 455 aaPredicted RBP14.55□□□□□ -0.08
SMPD1-202ENST00000526280 FAM173BQ6P4H8 233 aa14.55□□□□□ -0.08
SMPD1-202ENST00000526280 TRMT13Q9NUP7 481 aaKnown RBP14.55□□□□□ -0.08
SMPD1-202ENST00000526280 MYH9P35579 1960 aaKnown RBP14.55□□□□□ -0.08
SMPD1-202ENST00000526280 IGSF9BQ9UPX0 1349 aa14.55□□□□□ -0.08
SMPD1-202ENST00000526280 POTEB3A0JP26 581 aa14.54□□□□□ -0.08
SMPD1-202ENST00000526280 CLTBP09497 229 aa14.54□□□□□ -0.08
SMPD1-202ENST00000526280 PRPHP41219 470 aa14.54□□□□□ -0.08
SMPD1-202ENST00000526280 TECP42680 631 aa14.54□□□□□ -0.08
SMPD1-202ENST00000526280 ATP2C1P98194 919 aaPredicted RBP14.54□□□□□ -0.08
SMPD1-202ENST00000526280 HIC1Q14526 733 aa14.54□□□□□ -0.08
SMPD1-202ENST00000526280 EPHA7Q15375 998 aa14.54□□□□□ -0.08
SMPD1-202ENST00000526280 UGCGQ16739 394 aa14.54□□□□□ -0.08
SMPD1-202ENST00000526280 NCAPH2Q6IBW4 605 aa14.54□□□□□ -0.08
SMPD1-202ENST00000526280 POTEBQ6S5H4 581 aa14.54□□□□□ -0.08
SMPD1-202ENST00000526280 ATP8B4Q8TF62 1192 aa14.54□□□□□ -0.08
SMPD1-202ENST00000526280 TNPO1Q92973 898 aaKnown RBP14.54□□□□□ -0.08
SMPD1-202ENST00000526280 PDLIM7Q9NR12 457 aa14.54□□□□□ -0.08
SMPD1-202ENST00000526280 SETD4Q9NVD3 440 aa14.54□□□□□ -0.08
SMPD1-202ENST00000526280 NRCAMQ92823 1304 aa14.54□□□□□ -0.08
SMPD1-202ENST00000526280 KAT6AQ92794 2004 aa14.53□□□□□ -0.08
SMPD1-202ENST00000526280 C17orf102A2RUQ5 167 aa14.53□□□□□ -0.08
SMPD1-202ENST00000526280 TRIM43BA6NCK2 446 aa14.53□□□□□ -0.08
SMPD1-202ENST00000526280 KIAA0355O15063 1070 aa14.53□□□□□ -0.08
SMPD1-202ENST00000526280 ZNF862O60290 1169 aa14.53□□□□□ -0.08
SMPD1-202ENST00000526280 BMP15O95972 392 aa14.53□□□□□ -0.08
SMPD1-202ENST00000526280 F13A1P00488 732 aa14.53□□□□□ -0.08
SMPD1-202ENST00000526280 GNAT1P11488 350 aa14.53□□□□□ -0.08
SMPD1-202ENST00000526280 INSRRP14616 1297 aa14.53□□□□□ -0.08
SMPD1-202ENST00000526280 FXR2P51116 673 aaKnown RBP eCLIP14.53□□□□□ -0.08
SMPD1-202ENST00000526280 ADAM17P78536 824 aa14.53□□□□□ -0.08
SMPD1-202ENST00000526280 ZNF200P98182 395 aaPredicted RBP14.53□□□□□ -0.08
SMPD1-202ENST00000526280 SF3A1Q15459 793 aaKnown RBP14.53□□□□□ -0.08
SMPD1-202ENST00000526280 IL17AQ16552 155 aa14.53□□□□□ -0.08
SMPD1-202ENST00000526280 PTGISQ16647 500 aa14.53□□□□□ -0.08
SMPD1-202ENST00000526280 FOXD4L5Q5VV16 416 aaPredicted RBP14.53□□□□□ -0.08
SMPD1-202ENST00000526280 SH3RF1Q7Z6J0 888 aa14.53□□□□□ -0.08
SMPD1-202ENST00000526280 FOXD4L4Q8WXT5 416 aaPredicted RBP14.53□□□□□ -0.08
SMPD1-202ENST00000526280 ATP6V0A1Q93050 837 aa14.53□□□□□ -0.08
SMPD1-202ENST00000526280 TRIM43Q96BQ3 446 aaPredicted RBP14.53□□□□□ -0.08
SMPD1-202ENST00000526280 CTAGE1Q96RT6 745 aa14.53□□□□□ -0.08
SMPD1-202ENST00000526280 TMEM39AQ9NV64 488 aa14.53□□□□□ -0.08
SMPD1-202ENST00000526280 DAXXQ9UER7 740 aaPredicted RBP14.53□□□□□ -0.08
SMPD1-202ENST00000526280 TBX21Q9UL17 535 aa14.53□□□□□ -0.08
SMPD1-202ENST00000526280 TRPC6Q9Y210 931 aa14.53□□□□□ -0.08
SMPD1-202ENST00000526280 TRIP12Q14669 1992 aaPredicted RBP14.53□□□□□ -0.08
SMPD1-202ENST00000526280 POTEMA6NI47 508 aa14.52□□□□□ -0.08
SMPD1-202ENST00000526280 RRN3P2A6NIE6 340 aa14.52□□□□□ -0.08
SMPD1-202ENST00000526280 HBP1O60381 514 aa14.52□□□□□ -0.08
SMPD1-202ENST00000526280 BRD1O95696 1058 aa14.52□□□□□ -0.08
SMPD1-202ENST00000526280 P4HBP07237 508 aaKnown RBP14.52□□□□□ -0.08
SMPD1-202ENST00000526280 QARSP47897 775 aaKnown RBP14.52□□□□□ -0.08
SMPD1-202ENST00000526280 PSMC5P62195 406 aa14.52□□□□□ -0.08
SMPD1-202ENST00000526280 PPFIA1Q13136 1202 aa14.52□□□□□ -0.08
SMPD1-202ENST00000526280 PDIA5Q14554 519 aa14.52□□□□□ -0.08
SMPD1-202ENST00000526280 GRIK4Q16099 956 aa14.52□□□□□ -0.08
SMPD1-202ENST00000526280 TMEM266Q2M3C6 531 aa14.52□□□□□ -0.08
SMPD1-202ENST00000526280 ARL6IP4Q66PJ3 421 aaKnown RBP14.52□□□□□ -0.08
SMPD1-202ENST00000526280 DTHD1Q6ZMT9 781 aa14.52□□□□□ -0.08
SMPD1-202ENST00000526280 CKAP2LQ8IYA6 745 aa14.52□□□□□ -0.08
SMPD1-202ENST00000526280 BANK1Q8NDB2 785 aa14.52□□□□□ -0.08
SMPD1-202ENST00000526280 LMBR1Q8WVP7 490 aa14.52□□□□□ -0.08
SMPD1-202ENST00000526280 BBXQ8WY36 941 aaPredicted RBP14.52□□□□□ -0.08
SMPD1-202ENST00000526280 FAM167AQ96KS9 214 aa14.52□□□□□ -0.08
SMPD1-202ENST00000526280 HSD17B14Q9BPX1 270 aa14.52□□□□□ -0.08
SMPD1-202ENST00000526280 EIF2AK1Q9BQI3 630 aaKnown RBP14.52□□□□□ -0.08
SMPD1-202ENST00000526280 RGL1Q9NZL6 768 aa14.52□□□□□ -0.08
SMPD1-202ENST00000526280 CEP131Q9UPN4 1083 aa14.52□□□□□ -0.08
SMPD1-202ENST00000526280 ZDHHC9Q9Y397 364 aa14.52□□□□□ -0.08
SMPD1-202ENST00000526280 CLIC4Q9Y696 253 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms