RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 RASGRP4Q8TDF6 673 aa21.12■□□□□ 0.97
CAPN1-203ENST00000525013 MICAL3Q7RTP6 2002 aa21.12■□□□□ 0.97
CAPN1-203ENST00000525013 MYH9P35579 1960 aaKnown RBP21.11■□□□□ 0.97
CAPN1-203ENST00000525013 EFCAB14O75071 495 aa21.11■□□□□ 0.97
CAPN1-203ENST00000525013 CYP3A4P08684 503 aa21.11■□□□□ 0.97
CAPN1-203ENST00000525013 IGBP1P78318 339 aa21.11■□□□□ 0.97
CAPN1-203ENST00000525013 CPLX2Q6PUV4 134 aaKnown RBP21.11■□□□□ 0.97
CAPN1-203ENST00000525013 PCYT2Q99447 389 aa21.11■□□□□ 0.97
CAPN1-203ENST00000525013 TUBE1Q9UJT0 475 aa21.11■□□□□ 0.97
CAPN1-203ENST00000525013 TRPC6Q9Y210 931 aa21.11■□□□□ 0.97
CAPN1-203ENST00000525013 NLRP5P59047 1200 aa21.1■□□□□ 0.97
CAPN1-203ENST00000525013 TAF2Q6P1X5 1199 aa21.1■□□□□ 0.97
CAPN1-203ENST00000525013 RUFY4Q6ZNE9 571 aa21.1■□□□□ 0.97
CAPN1-203ENST00000525013 PPM1EQ8WY54 764 aa21.1■□□□□ 0.97
CAPN1-203ENST00000525013 SEPT8Q92599 483 aa21.1■□□□□ 0.97
CAPN1-203ENST00000525013 CERS4Q9HA82 394 aa21.1■□□□□ 0.97
CAPN1-203ENST00000525013 SH3GLB2Q9NR46 395 aa21.1■□□□□ 0.97
CAPN1-203ENST00000525013 IPO5O00410 1097 aaKnown RBP21.09■□□□□ 0.97
CAPN1-203ENST00000525013 BACH1O14867 736 aa21.09■□□□□ 0.97
CAPN1-203ENST00000525013 INSRRP14616 1297 aa21.09■□□□□ 0.97
CAPN1-203ENST00000525013 STAT5BP51692 787 aa21.09■□□□□ 0.97
CAPN1-203ENST00000525013 ADGRE1Q14246 886 aa21.09■□□□□ 0.97
CAPN1-203ENST00000525013 PLEKHG4Q58EX7 1191 aa21.09■□□□□ 0.97
CAPN1-203ENST00000525013 FAM117BQ6P1L5 589 aa21.09■□□□□ 0.97
CAPN1-203ENST00000525013 RSPH3Q86UC2 560 aa21.09■□□□□ 0.97
CAPN1-203ENST00000525013 CRYGNQ8WXF5 182 aa21.09■□□□□ 0.97
CAPN1-203ENST00000525013 TNPO1Q92973 898 aaKnown RBP21.09■□□□□ 0.97
CAPN1-203ENST00000525013 ZNF577Q9BSK1 485 aa21.09■□□□□ 0.97
CAPN1-203ENST00000525013 TRANK1O15050 2925 aa21.08■□□□□ 0.97
CAPN1-203ENST00000525013 IGLV3-22A0A075B6J6 115 aa21.08■□□□□ 0.97
CAPN1-203ENST00000525013 RRN3P2A6NIE6 340 aa21.08■□□□□ 0.97
CAPN1-203ENST00000525013 DLL1O00548 723 aa21.08■□□□□ 0.97
CAPN1-203ENST00000525013 DEXIO95424 95 aa21.08■□□□□ 0.97
CAPN1-203ENST00000525013 CCNE2O96020 404 aa21.08■□□□□ 0.97
CAPN1-203ENST00000525013 TAP1Q03518 808 aa21.08■□□□□ 0.97
CAPN1-203ENST00000525013 PRR16Q569H4 304 aa21.08■□□□□ 0.97
CAPN1-203ENST00000525013 PLPPR4Q7Z2D5 763 aa21.08■□□□□ 0.97
CAPN1-203ENST00000525013 OSBPL7Q9BZF2 842 aa21.08■□□□□ 0.97
CAPN1-203ENST00000525013 PRRC2BQ5JSZ5 2229 aaKnown RBP21.07■□□□□ 0.96
CAPN1-203ENST00000525013 MBLAC1A4D2B0 266 aaPredicted RBP21.07■□□□□ 0.96
CAPN1-203ENST00000525013 AMHP03971 560 aa21.07■□□□□ 0.96
CAPN1-203ENST00000525013 SETQ01105 290 aaPredicted RBP21.07■□□□□ 0.96
CAPN1-203ENST00000525013 PLCB4Q15147 1175 aa21.07■□□□□ 0.96
CAPN1-203ENST00000525013 FAM26DQ5JW98 314 aa21.07■□□□□ 0.96
CAPN1-203ENST00000525013 MARCH8Q5T0T0 291 aa21.07■□□□□ 0.96
CAPN1-203ENST00000525013 FAM160B1Q5W0V3 765 aa21.07■□□□□ 0.96
CAPN1-203ENST00000525013 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.07■□□□□ 0.96
CAPN1-203ENST00000525013 USP38Q8NB14 1042 aa21.07■□□□□ 0.96
CAPN1-203ENST00000525013 DNAJB3Q8WWF6 145 aa21.07■□□□□ 0.96
CAPN1-203ENST00000525013 ZBTB10Q96DT7 871 aa21.07■□□□□ 0.96
CAPN1-203ENST00000525013 FAM49AQ9H0Q0 323 aaPredicted RBP21.07■□□□□ 0.96
CAPN1-203ENST00000525013 SLKQ9H2G2 1235 aaPredicted RBP21.07■□□□□ 0.96
CAPN1-203ENST00000525013 TCEAL9Q9UHQ7 104 aa21.07■□□□□ 0.96
CAPN1-203ENST00000525013 LOXHD1Q8IVV2 1947 aa21.06■□□□□ 0.96
CAPN1-203ENST00000525013 EVPLQ92817 2033 aa21.06■□□□□ 0.96
CAPN1-203ENST00000525013 POTEB3A0JP26 581 aa21.06■□□□□ 0.96
CAPN1-203ENST00000525013 LCHNA4D1U4 455 aa21.06■□□□□ 0.96
CAPN1-203ENST00000525013 DHX15O43143 795 aaKnown RBP21.06■□□□□ 0.96
CAPN1-203ENST00000525013 ARHGEF15O94989 841 aa21.06■□□□□ 0.96
CAPN1-203ENST00000525013 ATG7O95352 703 aa21.06■□□□□ 0.96
CAPN1-203ENST00000525013 GJB5O95377 273 aa21.06■□□□□ 0.96
CAPN1-203ENST00000525013 CHRNA1P02708 482 aa21.06■□□□□ 0.96
CAPN1-203ENST00000525013 ANAPC15P60006 121 aa21.06■□□□□ 0.96
CAPN1-203ENST00000525013 CCDC85BQ15834 202 aaPredicted RBP21.06■□□□□ 0.96
CAPN1-203ENST00000525013 MIS18BP1Q6P0N0 1132 aa21.06■□□□□ 0.96
CAPN1-203ENST00000525013 POTEBQ6S5H4 581 aa21.06■□□□□ 0.96
CAPN1-203ENST00000525013 MYOCDQ8IZQ8 938 aa21.06■□□□□ 0.96
CAPN1-203ENST00000525013 TRAPPC12Q8WVT3 735 aa21.06■□□□□ 0.96
CAPN1-203ENST00000525013 ARNTL2Q8WYA1 636 aa21.06■□□□□ 0.96
CAPN1-203ENST00000525013 RAD9AQ99638 391 aa21.06■□□□□ 0.96
CAPN1-203ENST00000525013 TBC1D22BQ9NU19 505 aa21.06■□□□□ 0.96
CAPN1-203ENST00000525013 PCDHA4Q9UN74 947 aa21.06■□□□□ 0.96
CAPN1-203ENST00000525013 RFXAPO00287 272 aa21.05■□□□□ 0.96
CAPN1-203ENST00000525013 CDKL5O76039 1030 aa21.05■□□□□ 0.96
CAPN1-203ENST00000525013 SLC26A2P50443 739 aa21.05■□□□□ 0.96
CAPN1-203ENST00000525013 ABHD15Q6UXT9 468 aa21.05■□□□□ 0.96
CAPN1-203ENST00000525013 RPAINQ86UA6 219 aa21.05■□□□□ 0.96
CAPN1-203ENST00000525013 MICALL1Q8N3F8 863 aa21.05■□□□□ 0.96
CAPN1-203ENST00000525013 AIFM3Q96NN9 605 aa21.05■□□□□ 0.96
CAPN1-203ENST00000525013 IFIH1Q9BYX4 1025 aaKnown RBP21.05■□□□□ 0.96
CAPN1-203ENST00000525013 ZNF302Q9NR11 478 aa21.05■□□□□ 0.96
CAPN1-203ENST00000525013 WDR81Q562E7 1941 aa21.05■□□□□ 0.96
CAPN1-203ENST00000525013 EIF5BO60841 1220 aaKnown RBP21.04■□□□□ 0.96
CAPN1-203ENST00000525013 GHRP10912 638 aa21.04■□□□□ 0.96
CAPN1-203ENST00000525013 CIITAP33076 1130 aa21.04■□□□□ 0.96
CAPN1-203ENST00000525013 SCRN1Q12765 414 aa21.04■□□□□ 0.96
CAPN1-203ENST00000525013 SWSAP1Q6NVH7 229 aa21.04■□□□□ 0.96
CAPN1-203ENST00000525013 PDXDC2PQ6P474 469 aa21.04■□□□□ 0.96
CAPN1-203ENST00000525013 CCDC60Q8IWA6 550 aaPredicted RBP21.04■□□□□ 0.96
CAPN1-203ENST00000525013 CKAP2LQ8IYA6 745 aa21.04■□□□□ 0.96
CAPN1-203ENST00000525013 APBB2Q92870 758 aa21.04■□□□□ 0.96
CAPN1-203ENST00000525013 TPCN1Q9ULQ1 816 aa21.04■□□□□ 0.96
CAPN1-203ENST00000525013 SIP14410 1827 aa21.04■□□□□ 0.96
CAPN1-203ENST00000525013 IGKV6D-21A0A0A0MT36 114 aa21.03■□□□□ 0.96
CAPN1-203ENST00000525013 UPP2O95045 317 aa21.03■□□□□ 0.96
CAPN1-203ENST00000525013 USP11P51784 963 aa21.03■□□□□ 0.96
CAPN1-203ENST00000525013 MRPS6P82932 125 aaKnown RBP21.03■□□□□ 0.96
CAPN1-203ENST00000525013 ZNF746Q6NUN9 644 aaPredicted RBP21.03■□□□□ 0.96
CAPN1-203ENST00000525013 BLIDQ8IZY5 108 aa21.03■□□□□ 0.96
CAPN1-203ENST00000525013 TBCKQ8TEA7 893 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms