RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 PRR23AA6NEV1 266 aa8.91□□□□□ -0.98
NEDD8-203ENST00000524927 RAG1P15918 1043 aa8.91□□□□□ -0.98
NEDD8-203ENST00000524927 ZKSCAN1P17029 563 aaPredicted RBP8.91□□□□□ -0.98
NEDD8-203ENST00000524927 LIG1P18858 919 aa8.91□□□□□ -0.98
NEDD8-203ENST00000524927 SSTR4P31391 388 aa8.91□□□□□ -0.98
NEDD8-203ENST00000524927 ZNF165P49910 485 aa8.91□□□□□ -0.98
NEDD8-203ENST00000524927 FBXW10Q5XX13 1052 aa8.91□□□□□ -0.98
NEDD8-203ENST00000524927 DCAF15Q66K64 600 aa8.91□□□□□ -0.98
NEDD8-203ENST00000524927 MCTP1Q6DN14 999 aa8.91□□□□□ -0.98
NEDD8-203ENST00000524927 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.91□□□□□ -0.98
NEDD8-203ENST00000524927 LRP10Q7Z4F1 713 aa8.91□□□□□ -0.98
NEDD8-203ENST00000524927 FAM89AQ96GI7 184 aa8.91□□□□□ -0.98
NEDD8-203ENST00000524927 BRMS1Q9HCU9 246 aa8.91□□□□□ -0.98
NEDD8-203ENST00000524927 RAD18Q9NS91 495 aa8.91□□□□□ -0.98
NEDD8-203ENST00000524927 STRIP2Q9ULQ0 834 aa8.91□□□□□ -0.98
NEDD8-203ENST00000524927 MRVI1Q9Y6F6 885 aa8.91□□□□□ -0.98
NEDD8-203ENST00000524927 DNAH14Q0VDD8 3507 aa8.91□□□□□ -0.98
NEDD8-203ENST00000524927 A0A0G2JLL6 359 aaPredicted RBP8.9□□□□□ -0.98
NEDD8-203ENST00000524927 CTSBP07858 339 aa8.9□□□□□ -0.98
NEDD8-203ENST00000524927 CLTBP09497 229 aa8.9□□□□□ -0.98
NEDD8-203ENST00000524927 CYP2B6P20813 491 aa8.9□□□□□ -0.98
NEDD8-203ENST00000524927 RBM5P52756 815 aaKnown RBP eCLIP8.9□□□□□ -0.98
NEDD8-203ENST00000524927 FKBP1AP62942 108 aaKnown RBP8.9□□□□□ -0.98
NEDD8-203ENST00000524927 TLE2Q04725 743 aa8.9□□□□□ -0.98
NEDD8-203ENST00000524927 GK5Q6ZS86 529 aa8.9□□□□□ -0.98
NEDD8-203ENST00000524927 REC114Q7Z4M0 266 aa8.9□□□□□ -0.98
NEDD8-203ENST00000524927 PRRT2Q7Z6L0 340 aaPredicted RBP8.9□□□□□ -0.98
NEDD8-203ENST00000524927 MORC1Q86VD1 984 aa8.9□□□□□ -0.98
NEDD8-203ENST00000524927 SOCS4Q8WXH5 440 aa8.9□□□□□ -0.98
NEDD8-203ENST00000524927 FERD3LQ96RJ6 166 aa8.9□□□□□ -0.98
NEDD8-203ENST00000524927 ZNF341Q9BYN7 854 aa8.9□□□□□ -0.98
NEDD8-203ENST00000524927 BSDC1Q9NW68 430 aaPredicted RBP8.9□□□□□ -0.98
NEDD8-203ENST00000524927 KCNK4Q9NYG8 393 aa8.9□□□□□ -0.98
NEDD8-203ENST00000524927 PLXNA3P51805 1871 aa8.89□□□□□ -0.99
NEDD8-203ENST00000524927 FRMPD3Q5JV73 1810 aa8.89□□□□□ -0.99
NEDD8-203ENST00000524927 LOC100289279A0A1B0GTE1 492 aa8.89□□□□□ -0.99
NEDD8-203ENST00000524927 TCP10L2B9ZVM9 353 aa8.89□□□□□ -0.99
NEDD8-203ENST00000524927 F8W031 263 aaPredicted RBP8.89□□□□□ -0.99
NEDD8-203ENST00000524927 IRS4O14654 1257 aaPredicted RBP8.89□□□□□ -0.99
NEDD8-203ENST00000524927 ADAM11O75078 769 aa8.89□□□□□ -0.99
NEDD8-203ENST00000524927 SLC5A1P13866 664 aa8.89□□□□□ -0.99
NEDD8-203ENST00000524927 HSP90B1P14625 803 aaKnown RBP8.89□□□□□ -0.99
NEDD8-203ENST00000524927 FSTP19883 344 aa8.89□□□□□ -0.99
NEDD8-203ENST00000524927 CCT4P50991 539 aaKnown RBP8.89□□□□□ -0.99
NEDD8-203ENST00000524927 DUOXA2Q1HG44 320 aa8.89□□□□□ -0.99
NEDD8-203ENST00000524927 CCDC81Q6ZN84 652 aa8.89□□□□□ -0.99
NEDD8-203ENST00000524927 COPS6Q7L5N1 327 aa8.89□□□□□ -0.99
NEDD8-203ENST00000524927 AGGF1Q8N302 714 aaeCLIP8.89□□□□□ -0.99
NEDD8-203ENST00000524927 ARRDC4Q8NCT1 418 aa8.89□□□□□ -0.99
NEDD8-203ENST00000524927 ELMO3Q96BJ8 720 aa8.89□□□□□ -0.99
NEDD8-203ENST00000524927 ANAPC16Q96DE5 110 aa8.89□□□□□ -0.99
NEDD8-203ENST00000524927 SIN3AQ96ST3 1273 aa8.89□□□□□ -0.99
NEDD8-203ENST00000524927 SRRTQ9BXP5 876 aaKnown RBP8.89□□□□□ -0.99
NEDD8-203ENST00000524927 TDRD3Q9H7E2 651 aaKnown RBP8.89□□□□□ -0.99
NEDD8-203ENST00000524927 AKTIPQ9H8T0 292 aa8.89□□□□□ -0.99
NEDD8-203ENST00000524927 DDX20Q9UHI6 824 aaKnown RBP8.89□□□□□ -0.99
NEDD8-203ENST00000524927 PPT2Q9UMR5 302 aa8.89□□□□□ -0.99
NEDD8-203ENST00000524927 DAGLAQ9Y4D2 1042 aa8.89□□□□□ -0.99
NEDD8-203ENST00000524927 TRIOO75962 3097 aa8.89□□□□□ -0.99
NEDD8-203ENST00000524927 AK9Q5TCS8 1911 aa8.88□□□□□ -0.99
NEDD8-203ENST00000524927 ZNF521Q96K83 1311 aa8.88□□□□□ -0.99
NEDD8-203ENST00000524927 F8W735 103 aaPredicted RBP8.88□□□□□ -0.99
NEDD8-203ENST00000524927 TM4SF5O14894 197 aa8.88□□□□□ -0.99
NEDD8-203ENST00000524927 ZNF862O60290 1169 aa8.88□□□□□ -0.99
NEDD8-203ENST00000524927 SLFN14P0C7P3 912 aa8.88□□□□□ -0.99
NEDD8-203ENST00000524927 GCLCP48506 637 aaPredicted RBP8.88□□□□□ -0.99
NEDD8-203ENST00000524927 TAF7Q15545 349 aaPredicted RBP8.88□□□□□ -0.99
NEDD8-203ENST00000524927 LEXMQ3ZCV2 418 aa8.88□□□□□ -0.99
NEDD8-203ENST00000524927 EPHA10Q5JZY3 1008 aa8.88□□□□□ -0.99
NEDD8-203ENST00000524927 WIPI1Q5MNZ9 446 aaPredicted RBP8.88□□□□□ -0.99
NEDD8-203ENST00000524927 TMEM240Q5SV17 173 aa8.88□□□□□ -0.99
NEDD8-203ENST00000524927 NOL9Q5SY16 702 aaKnown RBP8.88□□□□□ -0.99
NEDD8-203ENST00000524927 HDXQ7Z353 690 aa8.88□□□□□ -0.99
NEDD8-203ENST00000524927 ANKRD18AQ8IVF6 992 aa8.88□□□□□ -0.99
NEDD8-203ENST00000524927 SUGP1Q8IWZ8 645 aaKnown RBP8.88□□□□□ -0.99
NEDD8-203ENST00000524927 UBASH3BQ8TF42 649 aa8.88□□□□□ -0.99
NEDD8-203ENST00000524927 WDR89Q96FK6 387 aaPredicted RBP8.88□□□□□ -0.99
NEDD8-203ENST00000524927 CRBNQ96SW2 442 aa8.88□□□□□ -0.99
NEDD8-203ENST00000524927 UPF3BQ9BZI7 483 aaKnown RBP8.88□□□□□ -0.99
NEDD8-203ENST00000524927 ALG13Q9NP73 1137 aaKnown RBP8.88□□□□□ -0.99
NEDD8-203ENST00000524927 CACNA2D2Q9NY47 1150 aa8.88□□□□□ -0.99
NEDD8-203ENST00000524927 YBX2Q9Y2T7 364 aaKnown RBP8.88□□□□□ -0.99
NEDD8-203ENST00000524927 LEMD3Q9Y2U8 911 aa8.88□□□□□ -0.99
NEDD8-203ENST00000524927 COL4A6Q14031 1691 aa8.88□□□□□ -0.99
NEDD8-203ENST00000524927 PLXNB2O15031 1838 aa8.87□□□□□ -0.99
NEDD8-203ENST00000524927 ASH1LQ9NR48 2969 aaKnown RBP8.87□□□□□ -0.99
NEDD8-203ENST00000524927 DCDC2CA8MYV0 355 aa8.87□□□□□ -0.99
NEDD8-203ENST00000524927 KBTBD13C9JR72 458 aa8.87□□□□□ -0.99
NEDD8-203ENST00000524927 DIAPH1O60610 1272 aaKnown RBP8.87□□□□□ -0.99
NEDD8-203ENST00000524927 CDK8P49336 464 aa8.87□□□□□ -0.99
NEDD8-203ENST00000524927 RBL2Q08999 1139 aa8.87□□□□□ -0.99
NEDD8-203ENST00000524927 PPIGQ13427 754 aaKnown RBP eCLIP8.87□□□□□ -0.99
NEDD8-203ENST00000524927 INPP5AQ14642 412 aa8.87□□□□□ -0.99
NEDD8-203ENST00000524927 CCDC152Q4G0S7 254 aa8.87□□□□□ -0.99
NEDD8-203ENST00000524927 EXOSC6Q5RKV6 272 aaKnown RBP8.87□□□□□ -0.99
NEDD8-203ENST00000524927 C16orf59Q7L2K0 433 aa8.87□□□□□ -0.99
NEDD8-203ENST00000524927 DPH6Q7L8W6 267 aa8.87□□□□□ -0.99
NEDD8-203ENST00000524927 CKAP2LQ8IYA6 745 aa8.87□□□□□ -0.99
NEDD8-203ENST00000524927 RTF1Q92541 710 aaKnown RBP8.87□□□□□ -0.99
NEDD8-203ENST00000524927 RMDN1Q96DB5 314 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms