RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-225	ENST00000524141	RASGEF1C	Q8N431	466 aa		11.22	□□□□□ -0.61
SPIDR-225	ENST00000524141	ANKS4B	Q8N8V4	417 aa		11.22	□□□□□ -0.61
SPIDR-225	ENST00000524141	N4BP2L2	Q92802	583 aa	Predicted RBP	11.22	□□□□□ -0.61
SPIDR-225	ENST00000524141	DNAJC19	Q96DA6	116 aa		11.22	□□□□□ -0.61
SPIDR-225	ENST00000524141	BIN2	Q9UBW5	565 aa	Predicted RBP	11.22	□□□□□ -0.61
SPIDR-225	ENST00000524141	TAF1	P21675	1872 aa		11.21	□□□□□ -0.61
SPIDR-225	ENST00000524141	KDM3A	Q9Y4C1	1321 aa		11.21	□□□□□ -0.61
SPIDR-225	ENST00000524141		A0A0A6YYK5	440 aa	Predicted RBP	11.21	□□□□□ -0.61
SPIDR-225	ENST00000524141	POTEM	A6NI47	508 aa		11.21	□□□□□ -0.61
SPIDR-225	ENST00000524141	PSEN1	P49768	467 aa		11.21	□□□□□ -0.61
SPIDR-225	ENST00000524141	MAGOH	P61326	146 aa	Known RBP	11.21	□□□□□ -0.61
SPIDR-225	ENST00000524141	PTK2	Q05397	1052 aa		11.21	□□□□□ -0.61
SPIDR-225	ENST00000524141	PPP2R5E	Q16537	467 aa		11.21	□□□□□ -0.61
SPIDR-225	ENST00000524141	EDRF1	Q3B7T1	1238 aa		11.21	□□□□□ -0.61
SPIDR-225	ENST00000524141	PEX26	Q7Z412	305 aa		11.21	□□□□□ -0.61
SPIDR-225	ENST00000524141	CEP57	Q86XR8	500 aa		11.21	□□□□□ -0.61
SPIDR-225	ENST00000524141	GLIS3	Q8NEA6	775 aa		11.21	□□□□□ -0.61
SPIDR-225	ENST00000524141	MAGOHB	Q96A72	148 aa	Known RBP	11.21	□□□□□ -0.61
SPIDR-225	ENST00000524141	SPAG5	Q96R06	1193 aa		11.21	□□□□□ -0.61
SPIDR-225	ENST00000524141	ANKRD2	Q9GZV1	360 aa		11.21	□□□□□ -0.61
SPIDR-225	ENST00000524141	NT5C3A	Q9H0P0	336 aa		11.21	□□□□□ -0.61
SPIDR-225	ENST00000524141	HAUS2	Q9NVX0	235 aa		11.21	□□□□□ -0.61
SPIDR-225	ENST00000524141	SUCLA2	Q9P2R7	463 aa	Predicted RBP	11.21	□□□□□ -0.61
SPIDR-225	ENST00000524141	BAG3	O95817	575 aa		11.21	□□□□□ -0.62
SPIDR-225	ENST00000524141	ALKBH5	Q6P6C2	394 aa	Known RBP	11.21	□□□□□ -0.62
SPIDR-225	ENST00000524141	CLEC4G	Q6UXB4	293 aa		11.21	□□□□□ -0.62
SPIDR-225	ENST00000524141	DDX42	Q86XP3	938 aa	Known RBP eCLIP	11.21	□□□□□ -0.62
SPIDR-225	ENST00000524141	ZC3H3	Q8IXZ2	948 aa	Known RBP	11.21	□□□□□ -0.62
SPIDR-225	ENST00000524141	METTL13	Q8N6R0	699 aa		11.21	□□□□□ -0.62
SPIDR-225	ENST00000524141	TPCN2	Q8NHX9	752 aa		11.21	□□□□□ -0.62
SPIDR-225	ENST00000524141	CCT6B	Q92526	530 aa		11.21	□□□□□ -0.62
SPIDR-225	ENST00000524141	CHMP6	Q96FZ7	201 aa		11.21	□□□□□ -0.62
SPIDR-225	ENST00000524141	AP1M1	Q9BXS5	423 aa		11.21	□□□□□ -0.62
SPIDR-225	ENST00000524141	DDX47	Q9H0S4	455 aa	Known RBP	11.21	□□□□□ -0.62
SPIDR-225	ENST00000524141	RAB17	Q9H0T7	212 aa		11.21	□□□□□ -0.62
SPIDR-225	ENST00000524141	NAGPA	Q9UK23	515 aa		11.21	□□□□□ -0.62
SPIDR-225	ENST00000524141	INTU	Q9ULD6	942 aa		11.21	□□□□□ -0.62
SPIDR-225	ENST00000524141	DOT1L	Q8TEK3	1739 aa		11.2	□□□□□ -0.62
SPIDR-225	ENST00000524141		F8VZ95	297 aa		11.2	□□□□□ -0.62
SPIDR-225	ENST00000524141	CETN3	O15182	167 aa		11.2	□□□□□ -0.62
SPIDR-225	ENST00000524141	DAPK3	O43293	454 aa		11.2	□□□□□ -0.62
SPIDR-225	ENST00000524141	SLC37A4	O43826	429 aa		11.2	□□□□□ -0.62
SPIDR-225	ENST00000524141	RASA1	P20936	1047 aa		11.2	□□□□□ -0.62
SPIDR-225	ENST00000524141	ADCY7	P51828	1080 aa		11.2	□□□□□ -0.62
SPIDR-225	ENST00000524141	ENOX2	Q16206	610 aa	Known RBP	11.2	□□□□□ -0.62
SPIDR-225	ENST00000524141	IRF2BP2	Q7Z5L9	587 aa		11.2	□□□□□ -0.62
SPIDR-225	ENST00000524141	HVCN1	Q96D96	273 aa		11.2	□□□□□ -0.62
SPIDR-225	ENST00000524141	SCLT1	Q96NL6	688 aa		11.2	□□□□□ -0.62
SPIDR-225	ENST00000524141	NEUROG2	Q9H2A3	272 aa		11.2	□□□□□ -0.62
SPIDR-225	ENST00000524141	ATP6V0A4	Q9HBG4	840 aa		11.2	□□□□□ -0.62
SPIDR-225	ENST00000524141	CNOT8	Q9UFF9	292 aa	Known RBP	11.2	□□□□□ -0.62
SPIDR-225	ENST00000524141	MGRN1	O60291	552 aa		11.2	□□□□□ -0.62
SPIDR-225	ENST00000524141	GSTA1	P08263	222 aa		11.2	□□□□□ -0.62
SPIDR-225	ENST00000524141	PRKCI	P41743	596 aa		11.2	□□□□□ -0.62
SPIDR-225	ENST00000524141	NPEPPS	P55786	919 aa		11.2	□□□□□ -0.62
SPIDR-225	ENST00000524141	GSTO1	P78417	241 aa		11.2	□□□□□ -0.62
SPIDR-225	ENST00000524141	DHX9	Q08211	1270 aa	Known RBP	11.2	□□□□□ -0.62
SPIDR-225	ENST00000524141	KCNH2	Q12809	1159 aa		11.2	□□□□□ -0.62
SPIDR-225	ENST00000524141	MSL1	Q68DK7	614 aa		11.2	□□□□□ -0.62
SPIDR-225	ENST00000524141	KCNK18	Q7Z418	384 aa		11.2	□□□□□ -0.62
SPIDR-225	ENST00000524141	SLFN11	Q7Z7L1	901 aa		11.2	□□□□□ -0.62
SPIDR-225	ENST00000524141	CCDC197	Q8NCU1	140 aa		11.2	□□□□□ -0.62
SPIDR-225	ENST00000524141	TLCD1	Q96CP7	247 aa		11.2	□□□□□ -0.62
SPIDR-225	ENST00000524141	AMACR	Q9UHK6	382 aa		11.2	□□□□□ -0.62
SPIDR-225	ENST00000524141	TTC7A	Q9ULT0	858 aa	Predicted RBP	11.2	□□□□□ -0.62
SPIDR-225	ENST00000524141	TPX2	Q9ULW0	747 aa	Known RBP	11.2	□□□□□ -0.62
SPIDR-225	ENST00000524141	SLC26A4	O43511	780 aa		11.19	□□□□□ -0.62
SPIDR-225	ENST00000524141	PPFIA2	O75334	1257 aa		11.19	□□□□□ -0.62
SPIDR-225	ENST00000524141	ZBTB48	P10074	688 aa	Predicted RBP	11.19	□□□□□ -0.62
SPIDR-225	ENST00000524141	GCFC2	P16383	781 aa	Known RBP	11.19	□□□□□ -0.62
SPIDR-225	ENST00000524141	DRD4	P21917	467 aa		11.19	□□□□□ -0.62
SPIDR-225	ENST00000524141	KLRK1	P26718	216 aa		11.19	□□□□□ -0.62
SPIDR-225	ENST00000524141	ADAM9	Q13443	819 aa		11.19	□□□□□ -0.62
SPIDR-225	ENST00000524141	BYSL	Q13895	437 aa	Known RBP	11.19	□□□□□ -0.62
SPIDR-225	ENST00000524141	ERFE	Q4G0M1	354 aa		11.19	□□□□□ -0.62
SPIDR-225	ENST00000524141	ERMARD	Q5T6L9	678 aa		11.19	□□□□□ -0.62
SPIDR-225	ENST00000524141	ZNF571	Q7Z3V5	609 aa	Predicted RBP	11.19	□□□□□ -0.62
SPIDR-225	ENST00000524141	CROCCP2	Q86T23	111 aa		11.19	□□□□□ -0.62
SPIDR-225	ENST00000524141	XPO6	Q96QU8	1125 aa	Known RBP	11.19	□□□□□ -0.62
SPIDR-225	ENST00000524141	PIGS	Q96S52	555 aa		11.19	□□□□□ -0.62
SPIDR-225	ENST00000524141	FMO2	Q99518	471 aa		11.19	□□□□□ -0.62
SPIDR-225	ENST00000524141	FAM129A	Q9BZQ8	928 aa		11.19	□□□□□ -0.62
SPIDR-225	ENST00000524141	DIS3	Q9Y2L1	958 aa	Known RBP	11.19	□□□□□ -0.62
SPIDR-225	ENST00000524141	MYH14	Q7Z406	1995 aa	Known RBP	11.19	□□□□□ -0.62
SPIDR-225	ENST00000524141		A0A1B0GUA9	196 aa		11.19	□□□□□ -0.62
SPIDR-225	ENST00000524141	TDP2	O95551	362 aa		11.19	□□□□□ -0.62
SPIDR-225	ENST00000524141	LDHB	P07195	334 aa	Known RBP	11.19	□□□□□ -0.62
SPIDR-225	ENST00000524141	H2AFZ	P0C0S5	128 aa		11.19	□□□□□ -0.62
SPIDR-225	ENST00000524141	PDHB	P11177	359 aa		11.19	□□□□□ -0.62
SPIDR-225	ENST00000524141	UCHL3	P15374	230 aa		11.19	□□□□□ -0.62
SPIDR-225	ENST00000524141	TRH	P20396	242 aa	Predicted RBP	11.19	□□□□□ -0.62
SPIDR-225	ENST00000524141	CLUL1	Q15846	466 aa		11.19	□□□□□ -0.62
SPIDR-225	ENST00000524141	HYI	Q5T013	277 aa		11.19	□□□□□ -0.62
SPIDR-225	ENST00000524141	H2AFV	Q71UI9	128 aa		11.19	□□□□□ -0.62
SPIDR-225	ENST00000524141	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	11.19	□□□□□ -0.62
SPIDR-225	ENST00000524141	CELF1	Q92879	486 aa	Known RBP	11.19	□□□□□ -0.62
SPIDR-225	ENST00000524141	NAP1L3	Q99457	506 aa	Predicted RBP	11.19	□□□□□ -0.62
SPIDR-225	ENST00000524141	KCTD10	Q9H3F6	313 aa		11.19	□□□□□ -0.62
SPIDR-225	ENST00000524141	CPVL	Q9H3G5	476 aa		11.19	□□□□□ -0.62
SPIDR-225	ENST00000524141	TMEM260	Q9NX78	707 aa		11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms