RNA–Protein interactions for RNA: ENST00000523805.5

PTK2-253, Transcript of protein tyrosine kinase 2, human

TSL 3

Gene PTK2, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-253	ENST00000523805	CDK7	P50613	346 aa		9.39	□□□□□ -0.91
PTK2-253	ENST00000523805	CDC37	Q16543	378 aa	Predicted RBP	9.39	□□□□□ -0.91
PTK2-253	ENST00000523805	C1orf229	Q6ZS94	237 aa	Predicted RBP	9.39	□□□□□ -0.91
PTK2-253	ENST00000523805	C16orf59	Q7L2K0	433 aa		9.39	□□□□□ -0.91
PTK2-253	ENST00000523805	OTOP2	Q7RTS6	562 aa		9.39	□□□□□ -0.91
PTK2-253	ENST00000523805	SMC5	Q8IY18	1101 aa		9.39	□□□□□ -0.91
PTK2-253	ENST00000523805	ESR2	Q92731	530 aa		9.39	□□□□□ -0.91
PTK2-253	ENST00000523805	SCLY	Q96I15	445 aa		9.39	□□□□□ -0.91
PTK2-253	ENST00000523805	WDR11	Q9BZH6	1224 aa		9.39	□□□□□ -0.91
PTK2-253	ENST00000523805	CRISPLD1	Q9H336	500 aa		9.39	□□□□□ -0.91
PTK2-253	ENST00000523805	RNF41	Q9H4P4	317 aa	Predicted RBP	9.39	□□□□□ -0.91
PTK2-253	ENST00000523805	KAT14	Q9H8E8	782 aa		9.39	□□□□□ -0.91
PTK2-253	ENST00000523805	VTA1	Q9NP79	307 aa		9.39	□□□□□ -0.91
PTK2-253	ENST00000523805	GDF2	Q9UK05	429 aa	Predicted RBP	9.39	□□□□□ -0.91
PTK2-253	ENST00000523805	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	9.39	□□□□□ -0.91
PTK2-253	ENST00000523805	GRIN2D	O15399	1336 aa		9.38	□□□□□ -0.91
PTK2-253	ENST00000523805	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	9.38	□□□□□ -0.91
PTK2-253	ENST00000523805	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	9.38	□□□□□ -0.91
PTK2-253	ENST00000523805	MSTN	O14793	375 aa		9.38	□□□□□ -0.91
PTK2-253	ENST00000523805	SORBS3	O60504	671 aa		9.38	□□□□□ -0.91
PTK2-253	ENST00000523805	CYP2C9	P11712	490 aa		9.38	□□□□□ -0.91
PTK2-253	ENST00000523805	MFAP1	P55081	439 aa	Known RBP	9.38	□□□□□ -0.91
PTK2-253	ENST00000523805	RPS6	P62753	249 aa	Known RBP	9.38	□□□□□ -0.91
PTK2-253	ENST00000523805	SNRPN	P63162	240 aa	Known RBP	9.38	□□□□□ -0.91
PTK2-253	ENST00000523805	NUCB1	Q02818	461 aa		9.38	□□□□□ -0.91
PTK2-253	ENST00000523805	GRIN2C	Q14957	1233 aa		9.38	□□□□□ -0.91
PTK2-253	ENST00000523805	PPP2R5B	Q15173	497 aa		9.38	□□□□□ -0.91
PTK2-253	ENST00000523805	TLR1	Q15399	786 aa		9.38	□□□□□ -0.91
PTK2-253	ENST00000523805	TMEM240	Q5SV17	173 aa		9.38	□□□□□ -0.91
PTK2-253	ENST00000523805	IQSEC1	Q6DN90	963 aa		9.38	□□□□□ -0.91
PTK2-253	ENST00000523805	BTNL9	Q6UXG8	535 aa		9.38	□□□□□ -0.91
PTK2-253	ENST00000523805	DEFB128	Q7Z7B8	93 aa		9.38	□□□□□ -0.91
PTK2-253	ENST00000523805	RNF135	Q8IUD6	432 aa		9.38	□□□□□ -0.91
PTK2-253	ENST00000523805	CLEC4D	Q8WXI8	215 aa		9.38	□□□□□ -0.91
PTK2-253	ENST00000523805	TIFA	Q96CG3	184 aa		9.38	□□□□□ -0.91
PTK2-253	ENST00000523805	PBX4	Q9BYU1	374 aa		9.38	□□□□□ -0.91
PTK2-253	ENST00000523805	IL25	Q9H293	177 aa		9.38	□□□□□ -0.91
PTK2-253	ENST00000523805	VAT1L	Q9HCJ6	419 aa		9.38	□□□□□ -0.91
PTK2-253	ENST00000523805	TCP11L1	Q9NUJ3	509 aa		9.38	□□□□□ -0.91
PTK2-253	ENST00000523805	TRMT13	Q9NUP7	481 aa	Known RBP	9.38	□□□□□ -0.91
PTK2-253	ENST00000523805	CXXC1	Q9P0U4	656 aa	Predicted RBP	9.38	□□□□□ -0.91
PTK2-253	ENST00000523805	TET1	Q8NFU7	2136 aa		9.38	□□□□□ -0.91
PTK2-253	ENST00000523805	COL4A4	P53420	1690 aa	Predicted RBP	9.38	□□□□□ -0.91
PTK2-253	ENST00000523805	DNAH12	Q6ZR08	3092 aa		9.37	□□□□□ -0.91
PTK2-253	ENST00000523805	TNKS	O95271	1327 aa		9.37	□□□□□ -0.91
PTK2-253	ENST00000523805	CABYR	O75952	493 aa		9.37	□□□□□ -0.91
PTK2-253	ENST00000523805	CD4	P01730	458 aa		9.37	□□□□□ -0.91
PTK2-253	ENST00000523805	NOV	P48745	357 aa		9.37	□□□□□ -0.91
PTK2-253	ENST00000523805	RABGGTB	P53611	331 aa		9.37	□□□□□ -0.91
PTK2-253	ENST00000523805	DUSP28	Q4G0W2	176 aa		9.37	□□□□□ -0.91
PTK2-253	ENST00000523805	EFHC2	Q5JST6	749 aa		9.37	□□□□□ -0.91
PTK2-253	ENST00000523805	PSRC1	Q6PGN9	363 aa	Predicted RBP	9.37	□□□□□ -0.91
PTK2-253	ENST00000523805	SEPT14	Q6ZU15	432 aa		9.37	□□□□□ -0.91
PTK2-253	ENST00000523805	CHST3	Q7LGC8	479 aa		9.37	□□□□□ -0.91
PTK2-253	ENST00000523805	IQCA1	Q86XH1	822 aa		9.37	□□□□□ -0.91
PTK2-253	ENST00000523805	PGBD3	Q8N328	593 aa		9.37	□□□□□ -0.91
PTK2-253	ENST00000523805	USP38	Q8NB14	1042 aa		9.37	□□□□□ -0.91
PTK2-253	ENST00000523805	TBC1D5	Q92609	795 aa		9.37	□□□□□ -0.91
PTK2-253	ENST00000523805	WNT8A	Q9H1J5	351 aa		9.37	□□□□□ -0.91
PTK2-253	ENST00000523805	NKX2-4	Q9H2Z4	354 aa		9.37	□□□□□ -0.91
PTK2-253	ENST00000523805	PRDM12	Q9H4Q4	367 aa		9.37	□□□□□ -0.91
PTK2-253	ENST00000523805	ZNF576	Q9H609	170 aa		9.37	□□□□□ -0.91
PTK2-253	ENST00000523805	PRM3	Q9NNZ6	103 aa		9.37	□□□□□ -0.91
PTK2-253	ENST00000523805	IL23A	Q9NPF7	189 aa		9.37	□□□□□ -0.91
PTK2-253	ENST00000523805	TCF20	Q9UGU0	1960 aa	Known RBP	9.37	□□□□□ -0.91
PTK2-253	ENST00000523805	WDR19	Q8NEZ3	1342 aa		9.36	□□□□□ -0.91
PTK2-253	ENST00000523805	ARIH2	O95376	493 aa		9.36	□□□□□ -0.91
PTK2-253	ENST00000523805	TXN	P10599	105 aa	Known RBP	9.36	□□□□□ -0.91
PTK2-253	ENST00000523805	EIF2AK2	P19525	551 aa	Known RBP	9.36	□□□□□ -0.91
PTK2-253	ENST00000523805	CPT1A	P50416	773 aa		9.36	□□□□□ -0.91
PTK2-253	ENST00000523805	PURA	Q00577	322 aa	Known RBP	9.36	□□□□□ -0.91
PTK2-253	ENST00000523805	CCDC85B	Q15834	202 aa	Predicted RBP	9.36	□□□□□ -0.91
PTK2-253	ENST00000523805	IMMT	Q16891	758 aa	Known RBP	9.36	□□□□□ -0.91
PTK2-253	ENST00000523805	QRICH1	Q2TAL8	776 aa		9.36	□□□□□ -0.91
PTK2-253	ENST00000523805	SLCO4C1	Q6ZQN7	724 aa		9.36	□□□□□ -0.91
PTK2-253	ENST00000523805	ADGRF4	Q8IZF3	695 aa		9.36	□□□□□ -0.91
PTK2-253	ENST00000523805	MICALL1	Q8N3F8	863 aa		9.36	□□□□□ -0.91
PTK2-253	ENST00000523805	GOLGA6L1	Q8N7Z2	621 aa		9.36	□□□□□ -0.91
PTK2-253	ENST00000523805	ENAH	Q8N8S7	591 aa	Predicted RBP	9.36	□□□□□ -0.91
PTK2-253	ENST00000523805	CCDC136	Q96JN2	1154 aa		9.36	□□□□□ -0.91
PTK2-253	ENST00000523805	MPHOSPH6	Q99547	160 aa	Known RBP	9.36	□□□□□ -0.91
PTK2-253	ENST00000523805	UBAC1	Q9BSL1	405 aa		9.36	□□□□□ -0.91
PTK2-253	ENST00000523805	NOC4L	Q9BVI4	516 aa	Known RBP	9.36	□□□□□ -0.91
PTK2-253	ENST00000523805	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	9.36	□□□□□ -0.91
PTK2-253	ENST00000523805	PRDM6	Q9NQX0	595 aa		9.36	□□□□□ -0.91
PTK2-253	ENST00000523805	COL20A1	Q9P218	1284 aa		9.36	□□□□□ -0.91
PTK2-253	ENST00000523805	CUL9	Q8IWT3	2517 aa		9.36	□□□□□ -0.91
PTK2-253	ENST00000523805	RAD50	Q92878	1312 aa		9.35	□□□□□ -0.91
PTK2-253	ENST00000523805	C2CD2L	O14523	706 aa		9.35	□□□□□ -0.91
PTK2-253	ENST00000523805	FGB	P02675	491 aa		9.35	□□□□□ -0.91
PTK2-253	ENST00000523805	PARP1	P09874	1014 aa	Known RBP	9.35	□□□□□ -0.91
PTK2-253	ENST00000523805	SNHG28	P0DPA3	235 aa		9.35	□□□□□ -0.91
PTK2-253	ENST00000523805	MYOG	P15173	224 aa		9.35	□□□□□ -0.91
PTK2-253	ENST00000523805	HOXB4	P17483	251 aa	Predicted RBP	9.35	□□□□□ -0.91
PTK2-253	ENST00000523805	ATP4A	P20648	1035 aa		9.35	□□□□□ -0.91
PTK2-253	ENST00000523805	IGFBP4	P22692	258 aa		9.35	□□□□□ -0.91
PTK2-253	ENST00000523805	OXLD1	Q5BKU9	147 aa		9.35	□□□□□ -0.91
PTK2-253	ENST00000523805	GPATCH4	Q5T3I0	446 aa	Known RBP	9.35	□□□□□ -0.91
PTK2-253	ENST00000523805	HOMER1	Q86YM7	354 aa		9.35	□□□□□ -0.91
PTK2-253	ENST00000523805	STAG2	Q8N3U4	1231 aa		9.35	□□□□□ -0.91

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