RNA–Protein interactions for RNA: ENST00000523765.1

LAMA4-220, Transcript of laminin subunit alpha 4, humanhuman

TSL 5

Gene LAMA4, Length 1,054 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-220ENST00000523765 RGS22Q8NE09 1264 aa11.32□□□□□ -0.6
LAMA4-220ENST00000523765 IL31RAQ8NI17 732 aa11.32□□□□□ -0.6
LAMA4-220ENST00000523765 NSUN6Q8TEA1 469 aaKnown RBP11.32□□□□□ -0.6
LAMA4-220ENST00000523765 ATP8B4Q8TF62 1192 aa11.32□□□□□ -0.6
LAMA4-220ENST00000523765 NKD2Q969F2 451 aaPredicted RBP11.32□□□□□ -0.6
LAMA4-220ENST00000523765 SPATA33Q96N06 139 aa11.32□□□□□ -0.6
LAMA4-220ENST00000523765 ECHDC1Q9NTX5 307 aa11.32□□□□□ -0.6
LAMA4-220ENST00000523765 ZBTB40Q9NUA8 1239 aa11.32□□□□□ -0.6
LAMA4-220ENST00000523765 CACNA1BQ00975 2339 aa11.32□□□□□ -0.6
LAMA4-220ENST00000523765 MYO10Q9HD67 2058 aa11.32□□□□□ -0.6
LAMA4-220ENST00000523765 NCOR2Q9Y618 2525 aa11.32□□□□□ -0.6
LAMA4-220ENST00000523765 H3BRB1 525 aa11.31□□□□□ -0.6
LAMA4-220ENST00000523765 OPLAHO14841 1288 aa11.31□□□□□ -0.6
LAMA4-220ENST00000523765 IGHDP01880 384 aa11.31□□□□□ -0.6
LAMA4-220ENST00000523765 SLC3A2P08195 630 aaKnown RBP11.31□□□□□ -0.6
LAMA4-220ENST00000523765 NR3C2P08235 984 aa11.31□□□□□ -0.6
LAMA4-220ENST00000523765 SNHG28P0DPA3 235 aa11.31□□□□□ -0.6
LAMA4-220ENST00000523765 TOP1P11387 765 aaKnown RBP11.31□□□□□ -0.6
LAMA4-220ENST00000523765 UBA1P22314 1058 aaKnown RBP11.31□□□□□ -0.6
LAMA4-220ENST00000523765 LPIN1Q14693 890 aa11.31□□□□□ -0.6
LAMA4-220ENST00000523765 FAM26DQ5JW98 314 aa11.31□□□□□ -0.6
LAMA4-220ENST00000523765 ARHGEF16Q5VV41 709 aa11.31□□□□□ -0.6
LAMA4-220ENST00000523765 RTN4RL1Q86UN2 441 aaPredicted RBP11.31□□□□□ -0.6
LAMA4-220ENST00000523765 TRIM50Q86XT4 487 aa11.31□□□□□ -0.6
LAMA4-220ENST00000523765 P2RX5Q93086 422 aa11.31□□□□□ -0.6
LAMA4-220ENST00000523765 S1PR5Q9H228 398 aa11.31□□□□□ -0.6
LAMA4-220ENST00000523765 TUT1Q9H6E5 874 aaKnown RBP11.31□□□□□ -0.6
LAMA4-220ENST00000523765 EHMT1Q9H9B1 1298 aa11.31□□□□□ -0.6
LAMA4-220ENST00000523765 PXMP2Q9NR77 195 aa11.31□□□□□ -0.6
LAMA4-220ENST00000523765 HCSTQ9UBK5 93 aa11.31□□□□□ -0.6
LAMA4-220ENST00000523765 RWDD3Q9Y3V2 267 aa11.31□□□□□ -0.6
LAMA4-220ENST00000523765 PCDHB15Q9Y5E8 787 aa11.31□□□□□ -0.6
LAMA4-220ENST00000523765 B4DLN1 442 aa11.3□□□□□ -0.6
LAMA4-220ENST00000523765 PI15O43692 258 aa11.3□□□□□ -0.6
LAMA4-220ENST00000523765 EIF3JO75822 258 aaKnown RBP11.3□□□□□ -0.6
LAMA4-220ENST00000523765 PPP1R37O75864 691 aa11.3□□□□□ -0.6
LAMA4-220ENST00000523765 LGALS2P05162 132 aa11.3□□□□□ -0.6
LAMA4-220ENST00000523765 ATF7P17544 494 aaPredicted RBP11.3□□□□□ -0.6
LAMA4-220ENST00000523765 MRPL12P52815 198 aaKnown RBP11.3□□□□□ -0.6
LAMA4-220ENST00000523765 ERVFC1P60507 584 aa11.3□□□□□ -0.6
LAMA4-220ENST00000523765 ADAM17P78536 824 aa11.3□□□□□ -0.6
LAMA4-220ENST00000523765 MGAT3Q09327 533 aa11.3□□□□□ -0.6
LAMA4-220ENST00000523765 CDC37Q16543 378 aaPredicted RBP11.3□□□□□ -0.6
LAMA4-220ENST00000523765 RRP12Q5JTH9 1297 aaKnown RBP11.3□□□□□ -0.6
LAMA4-220ENST00000523765 FEZF2Q8TBJ5 459 aa11.3□□□□□ -0.6
LAMA4-220ENST00000523765 APBB2Q92870 758 aa11.3□□□□□ -0.6
LAMA4-220ENST00000523765 IWS1Q96ST2 819 aa11.3□□□□□ -0.6
LAMA4-220ENST00000523765 PLVAPQ9BX97 442 aa11.3□□□□□ -0.6
LAMA4-220ENST00000523765 NACAP1Q9BZK3 213 aa11.3□□□□□ -0.6
LAMA4-220ENST00000523765 FNDC1Q4ZHG4 1894 aaPredicted RBP11.29□□□□□ -0.6
LAMA4-220ENST00000523765 ORC4O43929 436 aa11.29□□□□□ -0.6
LAMA4-220ENST00000523765 HMMRO75330 724 aa11.29□□□□□ -0.6
LAMA4-220ENST00000523765 ASGR2P07307 311 aa11.29□□□□□ -0.6
LAMA4-220ENST00000523765 FGRP09769 529 aa11.29□□□□□ -0.6
LAMA4-220ENST00000523765 MYCLP12524 364 aaPredicted RBP11.29□□□□□ -0.6
LAMA4-220ENST00000523765 KCNC3Q14003 757 aa11.29□□□□□ -0.6
LAMA4-220ENST00000523765 PPP4R3BQ5MIZ7 849 aa11.29□□□□□ -0.6
LAMA4-220ENST00000523765 ZMYM1Q5SVZ6 1142 aa11.29□□□□□ -0.6
LAMA4-220ENST00000523765 CWF19L1Q69YN2 538 aaKnown RBP11.29□□□□□ -0.6
LAMA4-220ENST00000523765 SYCE2Q6PIF2 218 aa11.29□□□□□ -0.6
LAMA4-220ENST00000523765 ZBTB33Q86T24 672 aa11.29□□□□□ -0.6
LAMA4-220ENST00000523765 KIAA2013Q8IYS2 634 aa11.29□□□□□ -0.6
LAMA4-220ENST00000523765 LMBR1Q8WVP7 490 aa11.29□□□□□ -0.6
LAMA4-220ENST00000523765 ZBTB10Q96DT7 871 aa11.29□□□□□ -0.6
LAMA4-220ENST00000523765 LRRCC1Q9C099 1032 aa11.29□□□□□ -0.6
LAMA4-220ENST00000523765 TLE6Q9H808 572 aa11.29□□□□□ -0.6
LAMA4-220ENST00000523765 AGO3Q9H9G7 860 aaKnown RBP11.29□□□□□ -0.6
LAMA4-220ENST00000523765 ANAPC4Q9UJX5 808 aa11.29□□□□□ -0.6
LAMA4-220ENST00000523765 C2CD4DB7Z1M9 353 aa11.28□□□□□ -0.6
LAMA4-220ENST00000523765 CAND2O75155 1236 aa11.28□□□□□ -0.6
LAMA4-220ENST00000523765 ZFYP08048 801 aaPredicted RBP11.28□□□□□ -0.6
LAMA4-220ENST00000523765 DGLUCYQ7Z3D6 616 aa11.28□□□□□ -0.6
LAMA4-220ENST00000523765 PDCD2LQ9BRP1 358 aa11.28□□□□□ -0.6
LAMA4-220ENST00000523765 ZKSCAN3Q9BRR0 538 aa11.28□□□□□ -0.6
LAMA4-220ENST00000523765 TOMM22Q9NS69 142 aa11.28□□□□□ -0.6
LAMA4-220ENST00000523765 ABCB11O95342 1321 aa11.28□□□□□ -0.6
LAMA4-220ENST00000523765 CFBP00751 764 aa11.27□□□□□ -0.61
LAMA4-220ENST00000523765 WEE2P0C1S8 567 aa11.27□□□□□ -0.61
LAMA4-220ENST00000523765 HOXA13P31271 388 aaPredicted RBP11.27□□□□□ -0.61
LAMA4-220ENST00000523765 CD52P31358 61 aa11.27□□□□□ -0.61
LAMA4-220ENST00000523765 ARHGAP4P98171 946 aa11.27□□□□□ -0.61
LAMA4-220ENST00000523765 APOBRQ0VD83 1088 aa11.27□□□□□ -0.61
LAMA4-220ENST00000523765 PGM5Q15124 567 aa11.27□□□□□ -0.61
LAMA4-220ENST00000523765 DUSP6Q16828 381 aa11.27□□□□□ -0.61
LAMA4-220ENST00000523765 QRICH1Q2TAL8 776 aa11.27□□□□□ -0.61
LAMA4-220ENST00000523765 FBXO47Q5MNV8 452 aa11.27□□□□□ -0.61
LAMA4-220ENST00000523765 ANKRD54Q6NXT1 300 aa11.27□□□□□ -0.61
LAMA4-220ENST00000523765 LLGL2Q6P1M3 1020 aa11.27□□□□□ -0.61
LAMA4-220ENST00000523765 SMC5Q8IY18 1101 aa11.27□□□□□ -0.61
LAMA4-220ENST00000523765 ADGRF4Q8IZF3 695 aa11.27□□□□□ -0.61
LAMA4-220ENST00000523765 OTUD7AQ8TE49 926 aaPredicted RBP11.27□□□□□ -0.61
LAMA4-220ENST00000523765 POMKQ9H5K3 350 aa11.27□□□□□ -0.61
LAMA4-220ENST00000523765 TCP11L1Q9NUJ3 509 aa11.27□□□□□ -0.61
LAMA4-220ENST00000523765 CHD6Q8TD26 2715 aa11.27□□□□□ -0.61
LAMA4-220ENST00000523765 PPP1R11O60927 126 aaPredicted RBP11.26□□□□□ -0.61
LAMA4-220ENST00000523765 NPR3P17342 541 aa11.26□□□□□ -0.61
LAMA4-220ENST00000523765 IBSPP21815 317 aaPredicted RBP11.26□□□□□ -0.61
LAMA4-220ENST00000523765 TECP42680 631 aa11.26□□□□□ -0.61
LAMA4-220ENST00000523765 HSD17B4P51659 736 aa11.26□□□□□ -0.61
LAMA4-220ENST00000523765 UTP14CQ5TAP6 766 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms