RNA–Protein interactions for RNA: ENST00000523509.5

FAM49B-226, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 1,968 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-226ENST00000523509 C8orf74Q6P047 294 aa8.14□□□□□ -1.11
FAM49B-226ENST00000523509 GPBP1Q86WP2 473 aa8.14□□□□□ -1.11
FAM49B-226ENST00000523509 IFT20Q8IY31 132 aa8.14□□□□□ -1.11
FAM49B-226ENST00000523509 ANKRD13CQ8N6S4 541 aa8.14□□□□□ -1.11
FAM49B-226ENST00000523509 SYT2Q8N9I0 419 aaPredicted RBP8.14□□□□□ -1.11
FAM49B-226ENST00000523509 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.14□□□□□ -1.118e-7■■■■□ 21.1
FAM49B-226ENST00000523509 TBC1D5Q92609 795 aa8.14□□□□□ -1.11
FAM49B-226ENST00000523509 GJA10Q969M2 543 aa8.14□□□□□ -1.11
FAM49B-226ENST00000523509 LENG9Q96B70 501 aa8.14□□□□□ -1.11
FAM49B-226ENST00000523509 MS4A14Q96JA4 679 aa8.14□□□□□ -1.11
FAM49B-226ENST00000523509 DRC1Q96MC2 740 aa8.14□□□□□ -1.11
FAM49B-226ENST00000523509 GDAP1L1Q96MZ0 367 aa8.14□□□□□ -1.11
FAM49B-226ENST00000523509 P2RX7Q99572 595 aaKnown RBP8.14□□□□□ -1.11
FAM49B-226ENST00000523509 MXD3Q9BW11 206 aa8.14□□□□□ -1.11
FAM49B-226ENST00000523509 TANGO6Q9C0B7 1094 aa8.14□□□□□ -1.11
FAM49B-226ENST00000523509 DNAJC18Q9H819 358 aa8.14□□□□□ -1.11
FAM49B-226ENST00000523509 USP40Q9NVE5 1235 aa8.14□□□□□ -1.11
FAM49B-226ENST00000523509 GOLGA6AQ9NYA3 693 aa8.14□□□□□ -1.11
FAM49B-226ENST00000523509 SMARCAL1Q9NZC9 954 aa8.14□□□□□ -1.11
FAM49B-226ENST00000523509 EHD2Q9NZN4 543 aa8.14□□□□□ -1.11
FAM49B-226ENST00000523509 NYAP2Q9P242 653 aa8.14□□□□□ -1.11
FAM49B-226ENST00000523509 NPHP3-ACAD11A0A0J9YXS1 232 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 A6NNZ2 444 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 C6orf229H3BNL8 230 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 PDXKO00764 312 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 PPEF1O14829 653 aaPredicted RBP8.13□□□□□ -1.11
FAM49B-226ENST00000523509 HLA-DOAP06340 250 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 GLI1P08151 1106 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 SPATA31C1P0DKV0 1188 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 RPA1P27694 616 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 IRAK1P51617 712 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 SLC7A5Q01650 507 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 ADAM9Q13443 819 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 CDC37Q16543 378 aaPredicted RBP8.13□□□□□ -1.11
FAM49B-226ENST00000523509 NFIL3Q16649 462 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 TUBB8Q3ZCM7 444 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 TDRD12Q587J7 1177 aaKnown RBP8.13□□□□□ -1.11
FAM49B-226ENST00000523509 HERC4Q5GLZ8 1057 aaPredicted RBP8.13□□□□□ -1.11
FAM49B-226ENST00000523509 KCTD1Q719H9 257 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 CATSPER3Q86XQ3 398 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 ZFP91Q96JP5 570 aaPredicted RBP8.13□□□□□ -1.11
FAM49B-226ENST00000523509 SGIP1Q9BQI5 828 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 RASSF4Q9H2L5 321 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 BZW2Q9Y6E2 419 aaKnown RBP8.13□□□□□ -1.11
FAM49B-226ENST00000523509 GRIN2DO15399 1336 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 USP17L15C9J2P7 530 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 USP17L13C9JLJ4 530 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 USP17L11C9JVI0 530 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 USP17L18D6R9N7 530 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 USP17L22D6RA61 530 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 USP17L17D6RBQ6 530 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 USP17L19D6RCP7 530 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 USP17L20D6RJB6 530 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 TRIM66O15016 1216 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 SLC16A3O15427 465 aaKnown RBP8.13□□□□□ -1.11
FAM49B-226ENST00000523509 TOM1O60784 492 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 SREBF1P36956 1147 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 CASP5P51878 434 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 JAM2P57087 298 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 KLHL30Q0D2K2 578 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 USP17L24Q0WX57 530 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 ASIC2Q16515 512 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 KNOP1Q1ED39 458 aaKnown RBP8.13□□□□□ -1.11
FAM49B-226ENST00000523509 TTMPQ5BVD1 217 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 FAM182BQ5T319 152 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 TATDN1Q6P1N9 297 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 USP17L6PQ6QN14 398 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 SLFN11Q7Z7L1 901 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 SIAH1Q8IUQ4 282 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 TEX2Q8IWB9 1127 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 NELFCDQ8IXH7 590 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 LRRC57Q8N9N7 239 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 USP38Q8NB14 1042 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 SCFD2Q8WU76 684 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 PIK3R5Q8WYR1 880 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 ZBTB9Q96C00 473 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 ZIM3Q96PE6 472 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 TRERF1Q96PN7 1200 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 PSMB7Q99436 277 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 RYDENQ9NUL5 291 aaKnown RBP8.13□□□□□ -1.11
FAM49B-226ENST00000523509 USP21Q9UK80 565 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 HDAC9Q9UKV0 1011 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 CLEC11AQ9Y240 323 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 PCDHA1Q9Y5I3 950 aa8.13□□□□□ -1.11
FAM49B-226ENST00000523509 A0A0A6YYK5 440 aaPredicted RBP8.12□□□□□ -1.11
FAM49B-226ENST00000523509 GTPBP10A4D1E9 387 aaKnown RBP8.12□□□□□ -1.11
FAM49B-226ENST00000523509 TULP1O00294 542 aaPredicted RBP8.12□□□□□ -1.11
FAM49B-226ENST00000523509 EIF3HO15372 352 aaKnown RBP eCLIP8.12□□□□□ -1.11
FAM49B-226ENST00000523509 MARCH6O60337 910 aa8.12□□□□□ -1.11
FAM49B-226ENST00000523509 AFPP02771 609 aaKnown RBP8.12□□□□□ -1.11
FAM49B-226ENST00000523509 COL11A2P13942 1736 aaPredicted RBP8.12□□□□□ -1.11
FAM49B-226ENST00000523509 UCHL3P15374 230 aa8.12□□□□□ -1.11
FAM49B-226ENST00000523509 ERCC3P19447 782 aa8.12□□□□□ -1.11
FAM49B-226ENST00000523509 NR2F2P24468 414 aa8.12□□□□□ -1.11
FAM49B-226ENST00000523509 PON1P27169 355 aa8.12□□□□□ -1.11
FAM49B-226ENST00000523509 STAT3P40763 770 aa8.12□□□□□ -1.11
FAM49B-226ENST00000523509 MAGEA9P43362 315 aa8.12□□□□□ -1.11
FAM49B-226ENST00000523509 CARSP49589 748 aaKnown RBP8.12□□□□□ -1.11
FAM49B-226ENST00000523509 FKBP1AP62942 108 aaKnown RBP8.12□□□□□ -1.11
FAM49B-226ENST00000523509 ARHGAP4P98171 946 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms