RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 PSTPIP2Q9H939 334 aa29.78■■■□□ 2.36
PVT1-219ENST00000523427 LY9Q9HBG7 655 aa29.78■■■□□ 2.36
PVT1-219ENST00000523427 RWDD3Q9Y3V2 267 aa29.78■■■□□ 2.36
PVT1-219ENST00000523427 COL4A6Q14031 1691 aa29.77■■■□□ 2.36
PVT1-219ENST00000523427 LINC01565O15544 149 aa29.77■■■□□ 2.36
PVT1-219ENST00000523427 ITGB5P18084 799 aa29.77■■■□□ 2.36
PVT1-219ENST00000523427 CD52P31358 61 aa29.77■■■□□ 2.36
PVT1-219ENST00000523427 IRS1P35568 1242 aa29.77■■■□□ 2.36
PVT1-219ENST00000523427 FBXO47Q5MNV8 452 aa29.77■■■□□ 2.36
PVT1-219ENST00000523427 AGO3Q9H9G7 860 aaKnown RBP29.77■■■□□ 2.36
PVT1-219ENST00000523427 TMEM62Q0P6H9 643 aa29.76■■■□□ 2.35
PVT1-219ENST00000523427 MARCH8Q5T0T0 291 aa29.76■■■□□ 2.35
PVT1-219ENST00000523427 CASC1Q6TDU7 716 aa29.76■■■□□ 2.35
PVT1-219ENST00000523427 CCDC82Q8N4S0 544 aa29.76■■■□□ 2.35
PVT1-219ENST00000523427 SRBD1Q8N5C6 995 aaKnown RBP29.76■■■□□ 2.35
PVT1-219ENST00000523427 CDHR1Q96JP9 859 aa29.76■■■□□ 2.35
PVT1-219ENST00000523427 SMARCAD1Q9H4L7 1026 aa29.76■■■□□ 2.35
PVT1-219ENST00000523427 RALGAPA2Q2PPJ7 1873 aa29.76■■■□□ 2.35
PVT1-219ENST00000523427 C19orf67A6NJJ6 358 aa29.75■■■□□ 2.35
PVT1-219ENST00000523427 MBTPS2O43462 519 aa29.75■■■□□ 2.35
PVT1-219ENST00000523427 DDAH1O94760 285 aa29.75■■■□□ 2.35
PVT1-219ENST00000523427 MRPS6P82932 125 aaKnown RBP29.75■■■□□ 2.35
PVT1-219ENST00000523427 MTMR1Q13613 665 aa29.75■■■□□ 2.35
PVT1-219ENST00000523427 CTC1Q2NKJ3 1217 aa29.75■■■□□ 2.35
PVT1-219ENST00000523427 PAN2Q504Q3 1202 aaKnown RBP29.75■■■□□ 2.35
PVT1-219ENST00000523427 TSHZ1Q6ZSZ6 1077 aa29.75■■■□□ 2.35
PVT1-219ENST00000523427 CLP1Q92989 425 aaKnown RBP29.75■■■□□ 2.35
PVT1-219ENST00000523427 UPF3BQ9BZI7 483 aaKnown RBP29.75■■■□□ 2.35
PVT1-219ENST00000523427 RC3H2Q9HBD1 1191 aaKnown RBP29.75■■■□□ 2.35
PVT1-219ENST00000523427 PRC1O43663 620 aa29.74■■■□□ 2.35
PVT1-219ENST00000523427 ZNF689Q96CS4 500 aaPredicted RBP29.74■■■□□ 2.35
PVT1-219ENST00000523427 LZTS2Q9BRK4 669 aa29.74■■■□□ 2.35
PVT1-219ENST00000523427 MUTYHQ9UIF7 546 aa29.74■■■□□ 2.35
PVT1-219ENST00000523427 RBM8AQ9Y5S9 174 aaKnown RBP29.74■■■□□ 2.35
PVT1-219ENST00000523427 MRPL42Q9Y6G3 142 aaKnown RBP29.74■■■□□ 2.35
PVT1-219ENST00000523427 MBLAC1A4D2B0 266 aaPredicted RBP29.73■■■□□ 2.35
PVT1-219ENST00000523427 CCDC69A6NI79 296 aa29.73■■■□□ 2.35
PVT1-219ENST00000523427 SPDYE3A6NKU9 549 aa29.73■■■□□ 2.35
PVT1-219ENST00000523427 SGSM2O43147 1006 aa29.73■■■□□ 2.35
PVT1-219ENST00000523427 TBX10O75333 385 aa29.73■■■□□ 2.35
PVT1-219ENST00000523427 DGKIO75912 1065 aa29.73■■■□□ 2.35
PVT1-219ENST00000523427 INSRRP14616 1297 aa29.73■■■□□ 2.35
PVT1-219ENST00000523427 GNAQP50148 359 aa29.73■■■□□ 2.35
PVT1-219ENST00000523427 SMAD2Q15796 467 aaKnown RBP29.73■■■□□ 2.35
PVT1-219ENST00000523427 LINC01599Q8WXQ3 324 aa29.73■■■□□ 2.35
PVT1-219ENST00000523427 MAP3K14Q99558 947 aa29.73■■■□□ 2.35
PVT1-219ENST00000523427 PLAGL2Q9UPG8 496 aa29.73■■■□□ 2.35
PVT1-219ENST00000523427 TRPC6Q9Y210 931 aa29.73■■■□□ 2.35
PVT1-219ENST00000523427 UBIAD1Q9Y5Z9 338 aa29.73■■■□□ 2.35
PVT1-219ENST00000523427 NDUFV1P49821 464 aa29.72■■■□□ 2.35
PVT1-219ENST00000523427 RTN4RL1Q86UN2 441 aaPredicted RBP29.72■■■□□ 2.35
PVT1-219ENST00000523427 TRAPPC12Q8WVT3 735 aa29.72■■■□□ 2.35
PVT1-219ENST00000523427 CD207Q9UJ71 328 aa29.72■■■□□ 2.35
PVT1-219ENST00000523427 MMP1P03956 469 aa29.71■■■□□ 2.35
PVT1-219ENST00000523427 SMARCA1P28370 1054 aa29.71■■■□□ 2.35
PVT1-219ENST00000523427 IER5Q5VY09 327 aa29.71■■■□□ 2.35
PVT1-219ENST00000523427 HFE2Q6ZVN8 426 aa29.71■■■□□ 2.35
PVT1-219ENST00000523427 MAP4K1Q92918 833 aa29.71■■■□□ 2.35
PVT1-219ENST00000523427 FBXL18Q96ME1 805 aa29.71■■■□□ 2.35
PVT1-219ENST00000523427 PCDHA6Q9UN73 950 aa29.71■■■□□ 2.35
PVT1-219ENST00000523427 PCDHA8Q9Y5H6 950 aa29.71■■■□□ 2.35
PVT1-219ENST00000523427 M0QZ92 97 aa29.7■■■□□ 2.35
PVT1-219ENST00000523427 STXBP3O00186 592 aa29.7■■■□□ 2.35
PVT1-219ENST00000523427 DNAJB1P25685 340 aa29.7■■■□□ 2.35
PVT1-219ENST00000523427 SMAD4Q13485 552 aaKnown RBP29.7■■■□□ 2.35
PVT1-219ENST00000523427 CAMK1Q14012 370 aa29.7■■■□□ 2.35
PVT1-219ENST00000523427 PCYT2Q99447 389 aa29.7■■■□□ 2.35
PVT1-219ENST00000523427 POP1Q99575 1024 aaKnown RBP29.7■■■□□ 2.35
PVT1-219ENST00000523427 PLVAPQ9BX97 442 aa29.7■■■□□ 2.35
PVT1-219ENST00000523427 AZI2Q9H6S1 392 aa29.7■■■□□ 2.35
PVT1-219ENST00000523427 JADE2Q9NQC1 790 aa29.7■■■□□ 2.35
PVT1-219ENST00000523427 TTC3P53804 2025 aa29.69■■■□□ 2.34
PVT1-219ENST00000523427 RRN3P2A6NIE6 340 aa29.69■■■□□ 2.34
PVT1-219ENST00000523427 PPFIA3O75145 1194 aa29.69■■■□□ 2.34
PVT1-219ENST00000523427 GATMP50440 423 aa29.69■■■□□ 2.34
PVT1-219ENST00000523427 HEATR3Q7Z4Q2 680 aa29.69■■■□□ 2.34
PVT1-219ENST00000523427 ADGRD2Q7Z7M1 963 aa29.69■■■□□ 2.34
PVT1-219ENST00000523427 RBM23Q86U06 439 aaKnown RBP29.69■■■□□ 2.34
PVT1-219ENST00000523427 RNF135Q8IUD6 432 aa29.69■■■□□ 2.34
PVT1-219ENST00000523427 JPH1Q9HDC5 661 aaPredicted RBP29.69■■■□□ 2.34
PVT1-219ENST00000523427 TRPV2Q9Y5S1 764 aa29.69■■■□□ 2.34
PVT1-219ENST00000523427 ATG2AQ2TAZ0 1938 aa29.69■■■□□ 2.34
PVT1-219ENST00000523427 SH2B2O14492 632 aaPredicted RBP29.68■■■□□ 2.34
PVT1-219ENST00000523427 ITGB1P05556 798 aa29.68■■■□□ 2.34
PVT1-219ENST00000523427 MCM5P33992 734 aa29.68■■■□□ 2.34
PVT1-219ENST00000523427 MRE11P49959 708 aa29.68■■■□□ 2.34
PVT1-219ENST00000523427 NHLH1Q02575 133 aa29.68■■■□□ 2.34
PVT1-219ENST00000523427 ADAM15Q13444 863 aa29.68■■■□□ 2.34
PVT1-219ENST00000523427 COL9A3Q14050 684 aaPredicted RBP29.68■■■□□ 2.34
PVT1-219ENST00000523427 NPAS4Q8IUM7 802 aa29.68■■■□□ 2.34
PVT1-219ENST00000523427 CMTR2Q8IYT2 770 aaKnown RBP29.68■■■□□ 2.34
PVT1-219ENST00000523427 KLHL23Q8NBE8 558 aa29.68■■■□□ 2.34
PVT1-219ENST00000523427 PPP2R3CQ969Q6 453 aa29.68■■■□□ 2.34
PVT1-219ENST00000523427 LRRC2Q9BYS8 371 aa29.68■■■□□ 2.34
PVT1-219ENST00000523427 SLC9A2Q9UBY0 812 aa29.68■■■□□ 2.34
PVT1-219ENST00000523427 PADI3Q9ULW8 664 aa29.68■■■□□ 2.34
PVT1-219ENST00000523427 C5orf42Q9H799 3197 aa29.67■■■□□ 2.34
PVT1-219ENST00000523427 PAK2Q13177 524 aa29.67■■■□□ 2.34
PVT1-219ENST00000523427 TMEM266Q2M3C6 531 aa29.67■■■□□ 2.34
PVT1-219ENST00000523427 SPPL3Q8TCT6 385 aa29.67■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms