RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, human

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-238	ENST00000523298	LIPI	Q6XZB0	460 aa		6.35	□□□□□ -1.39
CTNNA1-238	ENST00000523298	AMIGO3	Q86WK7	504 aa		6.35	□□□□□ -1.39
CTNNA1-238	ENST00000523298	RAVER1	Q8IY67	606 aa	Known RBP	6.35	□□□□□ -1.39
CTNNA1-238	ENST00000523298	PANK1	Q8TE04	598 aa		6.35	□□□□□ -1.39
CTNNA1-238	ENST00000523298	ASB15	Q8WXK1	588 aa		6.35	□□□□□ -1.39
CTNNA1-238	ENST00000523298	FOXRED1	Q96CU9	486 aa	Predicted RBP	6.35	□□□□□ -1.39
CTNNA1-238	ENST00000523298	C16orf92	Q96LL3	132 aa		6.35	□□□□□ -1.39
CTNNA1-238	ENST00000523298	ASPSCR1	Q9BZE9	553 aa		6.35	□□□□□ -1.39
CTNNA1-238	ENST00000523298	HOMER2	Q9NSB8	354 aa		6.35	□□□□□ -1.39
CTNNA1-238	ENST00000523298	SLC5A4	Q9NY91	659 aa		6.35	□□□□□ -1.39
CTNNA1-238	ENST00000523298	DTL	Q9NZJ0	730 aa		6.35	□□□□□ -1.39
CTNNA1-238	ENST00000523298	BRINP1	O60477	761 aa		6.34	□□□□□ -1.39
CTNNA1-238	ENST00000523298	ZBTB7A	O95365	584 aa		6.34	□□□□□ -1.39
CTNNA1-238	ENST00000523298	PDGFRB	P09619	1106 aa		6.34	□□□□□ -1.39
CTNNA1-238	ENST00000523298	JUNB	P17275	347 aa	Predicted RBP	6.34	□□□□□ -1.39
CTNNA1-238	ENST00000523298	IRAK1	P51617	712 aa		6.34	□□□□□ -1.39
CTNNA1-238	ENST00000523298	SLC9A5	Q14940	896 aa		6.34	□□□□□ -1.39
CTNNA1-238	ENST00000523298	TERF2	Q15554	542 aa		6.34	□□□□□ -1.39
CTNNA1-238	ENST00000523298	MLANA	Q16655	118 aa		6.34	□□□□□ -1.39
CTNNA1-238	ENST00000523298	PHF19	Q5T6S3	580 aa		6.34	□□□□□ -1.39
CTNNA1-238	ENST00000523298	CD276	Q5ZPR3	534 aa		6.34	□□□□□ -1.39
CTNNA1-238	ENST00000523298	CC2D1A	Q6P1N0	951 aa	Predicted RBP	6.34	□□□□□ -1.39
CTNNA1-238	ENST00000523298	MPZL3	Q6UWV2	235 aa		6.34	□□□□□ -1.39
CTNNA1-238	ENST00000523298	RTN4RL1	Q86UN2	441 aa	Predicted RBP	6.34	□□□□□ -1.39
CTNNA1-238	ENST00000523298	STK32C	Q86UX6	486 aa		6.34	□□□□□ -1.39
CTNNA1-238	ENST00000523298	LDHD	Q86WU2	507 aa		6.34	□□□□□ -1.39
CTNNA1-238	ENST00000523298	SPATS2	Q86XZ4	545 aa	Known RBP	6.34	□□□□□ -1.39
CTNNA1-238	ENST00000523298	IGDCC3	Q8IVU1	814 aa		6.34	□□□□□ -1.39
CTNNA1-238	ENST00000523298	NLGN4X	Q8N0W4	816 aa		6.34	□□□□□ -1.39
CTNNA1-238	ENST00000523298	CBARP	Q8N350	705 aa	Predicted RBP	6.34	□□□□□ -1.39
CTNNA1-238	ENST00000523298	SLC5A5	Q92911	643 aa		6.34	□□□□□ -1.39
CTNNA1-238	ENST00000523298	TOMM22	Q9NS69	142 aa		6.34	□□□□□ -1.39
CTNNA1-238	ENST00000523298	APOBEC2	Q9Y235	224 aa	Known RBP	6.34	□□□□□ -1.39
CTNNA1-238	ENST00000523298	THRAP3	Q9Y2W1	955 aa	Known RBP	6.34	□□□□□ -1.39
CTNNA1-238	ENST00000523298	PRAMEF25	A6NGN4	478 aa		6.33	□□□□□ -1.4
CTNNA1-238	ENST00000523298	MAFK	O60675	156 aa		6.33	□□□□□ -1.4
CTNNA1-238	ENST00000523298	APP	P05067	770 aa		6.33	□□□□□ -1.4
CTNNA1-238	ENST00000523298	IGFBP6	P24592	240 aa	Predicted RBP	6.33	□□□□□ -1.4
CTNNA1-238	ENST00000523298	SDHA	P31040	664 aa		6.33	□□□□□ -1.4
CTNNA1-238	ENST00000523298	ERVK-21	P61565	698 aa		6.33	□□□□□ -1.4
CTNNA1-238	ENST00000523298	PDCD1	Q15116	288 aa		6.33	□□□□□ -1.4
CTNNA1-238	ENST00000523298	RNF219	Q5W0B1	726 aa	Predicted RBP	6.33	□□□□□ -1.4
CTNNA1-238	ENST00000523298	CNTD1	Q8N815	330 aa		6.33	□□□□□ -1.4
CTNNA1-238	ENST00000523298	RTF1	Q92541	710 aa	Known RBP	6.33	□□□□□ -1.4
CTNNA1-238	ENST00000523298	ZNF496	Q96IT1	587 aa	Predicted RBP	6.33	□□□□□ -1.4
CTNNA1-238	ENST00000523298	NOX5	Q96PH1	765 aa		6.33	□□□□□ -1.4
CTNNA1-238	ENST00000523298	SLC39A2	Q9NP94	309 aa		6.33	□□□□□ -1.4
CTNNA1-238	ENST00000523298	TOPORS	Q9NS56	1045 aa	Predicted RBP	6.33	□□□□□ -1.4
CTNNA1-238	ENST00000523298	KLHL42	Q9P2K6	505 aa		6.33	□□□□□ -1.4
CTNNA1-238	ENST00000523298	HRK	O00198	91 aa		6.32	□□□□□ -1.4
CTNNA1-238	ENST00000523298	GABRD	O14764	452 aa		6.32	□□□□□ -1.4
CTNNA1-238	ENST00000523298	FOXP2	O15409	715 aa		6.32	□□□□□ -1.4
CTNNA1-238	ENST00000523298	AOAH	P28039	575 aa		6.32	□□□□□ -1.4
CTNNA1-238	ENST00000523298	DBP	Q10586	325 aa	Predicted RBP	6.32	□□□□□ -1.4
CTNNA1-238	ENST00000523298	SART3	Q15020	963 aa	Known RBP	6.32	□□□□□ -1.4
CTNNA1-238	ENST00000523298	DDB1	Q16531	1140 aa		6.32	□□□□□ -1.4
CTNNA1-238	ENST00000523298	TMC5	Q6UXY8	1006 aa		6.32	□□□□□ -1.4
CTNNA1-238	ENST00000523298	ETV3L	Q6ZN32	361 aa		6.32	□□□□□ -1.4
CTNNA1-238	ENST00000523298	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	6.32	□□□□□ -1.4
CTNNA1-238	ENST00000523298	TRIM48	Q8IWZ4	208 aa		6.32	□□□□□ -1.4
CTNNA1-238	ENST00000523298	TOE1	Q96GM8	510 aa	Known RBP	6.32	□□□□□ -1.4
CTNNA1-238	ENST00000523298	GBP4	Q96PP9	640 aa		6.32	□□□□□ -1.4
CTNNA1-238	ENST00000523298	AMN	Q9BXJ7	453 aa		6.32	□□□□□ -1.4
CTNNA1-238	ENST00000523298	IRF2BPL	Q9H1B7	796 aa		6.32	□□□□□ -1.4
CTNNA1-238	ENST00000523298	PRDM12	Q9H4Q4	367 aa		6.32	□□□□□ -1.4
CTNNA1-238	ENST00000523298	DCP1A	Q9NPI6	582 aa	Predicted RBP	6.32	□□□□□ -1.4
CTNNA1-238	ENST00000523298	HIP1R	O75146	1068 aa		6.31	□□□□□ -1.4
CTNNA1-238	ENST00000523298	KRT1	P04264	644 aa		6.31	□□□□□ -1.4
CTNNA1-238	ENST00000523298	GJA4	P35212	333 aa		6.31	□□□□□ -1.4
CTNNA1-238	ENST00000523298	PHC1	P78364	1004 aa		6.31	□□□□□ -1.4
CTNNA1-238	ENST00000523298	CACNB2	Q08289	660 aa	Predicted RBP	6.31	□□□□□ -1.4
CTNNA1-238	ENST00000523298	INAVA	Q3KP66	663 aa		6.31	□□□□□ -1.4
CTNNA1-238	ENST00000523298	LRSAM1	Q6UWE0	723 aa		6.31	□□□□□ -1.4
CTNNA1-238	ENST00000523298	CD300LD	Q6UXZ3	194 aa		6.31	□□□□□ -1.4
CTNNA1-238	ENST00000523298	NECAB2	Q7Z6G3	386 aa		6.31	□□□□□ -1.4
CTNNA1-238	ENST00000523298	FERMT3	Q86UX7	667 aa		6.31	□□□□□ -1.4
CTNNA1-238	ENST00000523298	CILP2	Q8IUL8	1156 aa		6.31	□□□□□ -1.4
CTNNA1-238	ENST00000523298	ERCC4	Q92889	916 aa	Predicted RBP	6.31	□□□□□ -1.4
CTNNA1-238	ENST00000523298	DDX11	Q96FC9	970 aa		6.31	□□□□□ -1.4
CTNNA1-238	ENST00000523298	GORASP1	Q9BQQ3	440 aa		6.31	□□□□□ -1.4
CTNNA1-238	ENST00000523298	EPB41L4B	Q9H329	900 aa		6.31	□□□□□ -1.4
CTNNA1-238	ENST00000523298	PCIF1	Q9H4Z3	704 aa		6.31	□□□□□ -1.4
CTNNA1-238	ENST00000523298	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	6.31	□□□□□ -1.4
CTNNA1-238	ENST00000523298	HSPBP1	Q9NZL4	362 aa		6.31	□□□□□ -1.4
CTNNA1-238	ENST00000523298	TRHDE	Q9UKU6	1024 aa		6.31	□□□□□ -1.4
CTNNA1-238	ENST00000523298	LRRC10B	A6NIK2	292 aa		6.3	□□□□□ -1.4
CTNNA1-238	ENST00000523298	GOLGA6L22	H0YM25	854 aa		6.3	□□□□□ -1.4
CTNNA1-238	ENST00000523298	ELL2	O00472	640 aa	Predicted RBP	6.3	□□□□□ -1.4
CTNNA1-238	ENST00000523298	NFIB	O00712	420 aa		6.3	□□□□□ -1.4
CTNNA1-238	ENST00000523298	ABLIM1	O14639	778 aa		6.3	□□□□□ -1.4
CTNNA1-238	ENST00000523298	PEX10	O60683	326 aa		6.3	□□□□□ -1.4
CTNNA1-238	ENST00000523298	IL18BP	O95998	194 aa		6.3	□□□□□ -1.4
CTNNA1-238	ENST00000523298	IARS	P41252	1262 aa	Known RBP	6.3	□□□□□ -1.4
CTNNA1-238	ENST00000523298	LIMS1	P48059	325 aa		6.3	□□□□□ -1.4
CTNNA1-238	ENST00000523298	MESP2	Q0VG99	397 aa		6.3	□□□□□ -1.4
CTNNA1-238	ENST00000523298	ADAM9	Q13443	819 aa		6.3	□□□□□ -1.4
CTNNA1-238	ENST00000523298	ZNF174	Q15697	407 aa		6.3	□□□□□ -1.4
CTNNA1-238	ENST00000523298	TMEFF1	Q8IYR6	380 aa		6.3	□□□□□ -1.4
CTNNA1-238	ENST00000523298	SMARCC2	Q8TAQ2	1214 aa		6.3	□□□□□ -1.4
CTNNA1-238	ENST00000523298	CPA5	Q8WXQ8	436 aa		6.3	□□□□□ -1.4

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