RNA–Protein interactions for RNA: ENST00000522230.1

CKS1BP7-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 7, humanhuman

BASIC

Gene CKS1BP7, Length 235 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP7-201ENST00000522230 NLRX1Q86UT6 975 aa3.58□□□□□ -1.84
CKS1BP7-201ENST00000522230 FERMT3Q86UX7 667 aa3.58□□□□□ -1.84
CKS1BP7-201ENST00000522230 Q8N1Y9 231 aa3.58□□□□□ -1.84
CKS1BP7-201ENST00000522230 C2orf69Q8N8R5 385 aa3.58□□□□□ -1.84
CKS1BP7-201ENST00000522230 SMC1BQ8NDV3 1235 aa3.58□□□□□ -1.84
CKS1BP7-201ENST00000522230 OR2W6PQ8NHA6 318 aa3.58□□□□□ -1.84
CKS1BP7-201ENST00000522230 WDR66Q8TBY9 1149 aa3.58□□□□□ -1.84
CKS1BP7-201ENST00000522230 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.58□□□□□ -1.84
CKS1BP7-201ENST00000522230 USP7Q93009 1102 aa3.58□□□□□ -1.84
CKS1BP7-201ENST00000522230 SMAD5Q99717 465 aaKnown RBP3.58□□□□□ -1.84
CKS1BP7-201ENST00000522230 VTA1Q9NP79 307 aa3.58□□□□□ -1.84
CKS1BP7-201ENST00000522230 CABP5Q9NP86 173 aa3.58□□□□□ -1.84
CKS1BP7-201ENST00000522230 PDLIM7Q9NR12 457 aa3.58□□□□□ -1.84
CKS1BP7-201ENST00000522230 HOMER2Q9NSB8 354 aa3.58□□□□□ -1.84
CKS1BP7-201ENST00000522230 B4GALT6Q9UBX8 382 aa3.58□□□□□ -1.84
CKS1BP7-201ENST00000522230 MCM8Q9UJA3 840 aa3.58□□□□□ -1.84
CKS1BP7-201ENST00000522230 PLA2G2DQ9UNK4 145 aa3.58□□□□□ -1.84
CKS1BP7-201ENST00000522230 COA3Q9Y2R0 106 aaPredicted RBP3.58□□□□□ -1.84
CKS1BP7-201ENST00000522230 TELO2Q9Y4R8 837 aa3.58□□□□□ -1.84
CKS1BP7-201ENST00000522230 X6R8D5 127 aa3.58□□□□□ -1.84
CKS1BP7-201ENST00000522230 DHX29Q7Z478 1369 aaKnown RBP3.58□□□□□ -1.84
CKS1BP7-201ENST00000522230 USP47Q96K76 1375 aa3.58□□□□□ -1.84
CKS1BP7-201ENST00000522230 KDM5DQ9BY66 1539 aa3.58□□□□□ -1.84
CKS1BP7-201ENST00000522230 DIP2BQ9P265 1576 aa3.58□□□□□ -1.84
CKS1BP7-201ENST00000522230 SCO2A0A1W2PP80 73 aa3.57□□□□□ -1.84
CKS1BP7-201ENST00000522230 A0A1W2PQJ5 194 aa3.57□□□□□ -1.84
CKS1BP7-201ENST00000522230 FITM1A5D6W6 292 aa3.57□□□□□ -1.84
CKS1BP7-201ENST00000522230 NUDT19A8MXV4 375 aa3.57□□□□□ -1.84
CKS1BP7-201ENST00000522230 E9PCH4 1651 aa3.57□□□□□ -1.84
CKS1BP7-201ENST00000522230 SCDO00767 359 aa3.57□□□□□ -1.84
CKS1BP7-201ENST00000522230 GPR39O43194 453 aa3.57□□□□□ -1.84
CKS1BP7-201ENST00000522230 HYAL3O43820 417 aaPredicted RBP3.57□□□□□ -1.84
CKS1BP7-201ENST00000522230 ROCK2O75116 1388 aaKnown RBP3.57□□□□□ -1.84
CKS1BP7-201ENST00000522230 FKBP9O95302 570 aa3.57□□□□□ -1.84
CKS1BP7-201ENST00000522230 HMGB1P09429 215 aaKnown RBP3.57□□□□□ -1.84
CKS1BP7-201ENST00000522230 PDGFRBP09619 1106 aa3.57□□□□□ -1.84
CKS1BP7-201ENST00000522230 ZBTB48P10074 688 aaPredicted RBP3.57□□□□□ -1.84
CKS1BP7-201ENST00000522230 BPIP17213 487 aa3.57□□□□□ -1.84
CKS1BP7-201ENST00000522230 NAT1P18440 290 aa3.57□□□□□ -1.84
CKS1BP7-201ENST00000522230 SLC9A1P19634 815 aa3.57□□□□□ -1.84
CKS1BP7-201ENST00000522230 GDNFP39905 211 aa3.57□□□□□ -1.84
CKS1BP7-201ENST00000522230 CLTCL1P53675 1640 aa3.57□□□□□ -1.84
CKS1BP7-201ENST00000522230 CHRNEQ04844 493 aa3.57□□□□□ -1.84
CKS1BP7-201ENST00000522230 GRIN1Q05586 938 aa3.57□□□□□ -1.84
CKS1BP7-201ENST00000522230 DHCR24Q15392 516 aa3.57□□□□□ -1.84
CKS1BP7-201ENST00000522230 HABP4Q5JVS0 413 aaKnown RBP3.57□□□□□ -1.84
CKS1BP7-201ENST00000522230 FRMPD1Q5SYB0 1578 aa3.57□□□□□ -1.84
CKS1BP7-201ENST00000522230 WASHC2AQ641Q2 1341 aa3.57□□□□□ -1.84
CKS1BP7-201ENST00000522230 ZNF518AQ6AHZ1 1483 aa3.57□□□□□ -1.84
CKS1BP7-201ENST00000522230 WWC2Q6AWC2 1192 aa3.57□□□□□ -1.84
CKS1BP7-201ENST00000522230 FKBP9P1Q75LS8 142 aa3.57□□□□□ -1.84
CKS1BP7-201ENST00000522230 IQGAP3Q86VI3 1631 aa3.57□□□□□ -1.84
CKS1BP7-201ENST00000522230 OXR1Q8N573 874 aa3.57□□□□□ -1.84
CKS1BP7-201ENST00000522230 NLGN2Q8NFZ4 835 aa3.57□□□□□ -1.84
CKS1BP7-201ENST00000522230 MYLIPQ8WY64 445 aa3.57□□□□□ -1.84
CKS1BP7-201ENST00000522230 MTMR8Q96EF0 704 aa3.57□□□□□ -1.84
CKS1BP7-201ENST00000522230 EPB41L1Q9H4G0 881 aa3.57□□□□□ -1.84
CKS1BP7-201ENST00000522230 OXSMQ9NWU1 459 aa3.57□□□□□ -1.84
CKS1BP7-201ENST00000522230 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.57□□□□□ -1.84
CKS1BP7-201ENST00000522230 HECW2Q9P2P5 1572 aa3.57□□□□□ -1.84
CKS1BP7-201ENST00000522230 ZKSCAN5Q9Y2L8 839 aa3.57□□□□□ -1.84
CKS1BP7-201ENST00000522230 WASHC2CQ9Y4E1 1318 aa3.57□□□□□ -1.84
CKS1BP7-201ENST00000522230 MAP3K4Q9Y6R4 1608 aa3.57□□□□□ -1.84
CKS1BP7-201ENST00000522230 PPRC1Q5VV67 1664 aaKnown RBP3.56□□□□□ -1.84
CKS1BP7-201ENST00000522230 MROH1Q8NDA8 1641 aa3.56□□□□□ -1.84
CKS1BP7-201ENST00000522230 CFAP74Q9C0B2 1584 aa3.56□□□□□ -1.84
CKS1BP7-201ENST00000522230 DIP2CQ9Y2E4 1556 aa3.56□□□□□ -1.84
CKS1BP7-201ENST00000522230 PRDM15P57071 1507 aaPredicted RBP3.56□□□□□ -1.84
CKS1BP7-201ENST00000522230 ARAP3Q8WWN8 1544 aa3.56□□□□□ -1.84
CKS1BP7-201ENST00000522230 ATP10AO60312 1499 aa3.56□□□□□ -1.84
CKS1BP7-201ENST00000522230 RTEL1-TNFRSF6BF6WH68 1400 aa3.56□□□□□ -1.84
CKS1BP7-201ENST00000522230 CCDC7Q96M83 1385 aa3.56□□□□□ -1.84
CKS1BP7-201ENST00000522230 KIF7Q2M1P5 1343 aa3.56□□□□□ -1.84
CKS1BP7-201ENST00000522230 ADGRF5Q8IZF2 1346 aa3.56□□□□□ -1.84
CKS1BP7-201ENST00000522230 ST20-MTHFSA0A0A6YYL1 179 aa3.56□□□□□ -1.84
CKS1BP7-201ENST00000522230 SLC12A8A0AV02 714 aa3.56□□□□□ -1.84
CKS1BP7-201ENST00000522230 SGSM2O43147 1006 aa3.56□□□□□ -1.84
CKS1BP7-201ENST00000522230 ANP32CO43423 234 aa3.56□□□□□ -1.84
CKS1BP7-201ENST00000522230 TGM5O43548 720 aa3.56□□□□□ -1.84
CKS1BP7-201ENST00000522230 GAS7O60861 476 aa3.56□□□□□ -1.84
CKS1BP7-201ENST00000522230 DGKIO75912 1065 aa3.56□□□□□ -1.84
CKS1BP7-201ENST00000522230 PRKD3O94806 890 aa3.56□□□□□ -1.84
CKS1BP7-201ENST00000522230 NPTXRO95502 500 aa3.56□□□□□ -1.84
CKS1BP7-201ENST00000522230 APPP05067 770 aa3.56□□□□□ -1.84
CKS1BP7-201ENST00000522230 DBHP09172 617 aa3.56□□□□□ -1.84
CKS1BP7-201ENST00000522230 GLI4P10075 376 aa3.56□□□□□ -1.84
CKS1BP7-201ENST00000522230 CORO7P57737 925 aa3.56□□□□□ -1.84
CKS1BP7-201ENST00000522230 LACTBP83111 547 aaPredicted RBP3.56□□□□□ -1.84
CKS1BP7-201ENST00000522230 IRF9Q00978 393 aa3.56□□□□□ -1.84
CKS1BP7-201ENST00000522230 SPIRE1Q08AE8 756 aa3.56□□□□□ -1.84
CKS1BP7-201ENST00000522230 MTMR1Q13613 665 aa3.56□□□□□ -1.84
CKS1BP7-201ENST00000522230 SAFB2Q14151 953 aaKnown RBP eCLIP3.56□□□□□ -1.84
CKS1BP7-201ENST00000522230 SART3Q15020 963 aaKnown RBP3.56□□□□□ -1.84
CKS1BP7-201ENST00000522230 GPR19Q15760 415 aa3.56□□□□□ -1.84
CKS1BP7-201ENST00000522230 ATP13A4Q4VNC1 1196 aa3.56□□□□□ -1.84
CKS1BP7-201ENST00000522230 CCDC184Q52MB2 194 aa3.56□□□□□ -1.84
CKS1BP7-201ENST00000522230 MROH9Q5TGP6 573 aa3.56□□□□□ -1.84
CKS1BP7-201ENST00000522230 STEAP3Q658P3 488 aa3.56□□□□□ -1.84
CKS1BP7-201ENST00000522230 HDGFL2Q7Z4V5 671 aaPredicted RBP3.56□□□□□ -1.84
CKS1BP7-201ENST00000522230 SPPL2CQ8IUH8 684 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms