RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 POTEGQ6S5H5 508 aa9.54□□□□□ -0.88
VAPB-206ENST00000520497 SEPT14Q6ZU15 432 aa9.54□□□□□ -0.88
VAPB-206ENST00000520497 MIER3Q7Z3K6 550 aa9.54□□□□□ -0.88
VAPB-206ENST00000520497 DPP9Q86TI2 863 aa9.54□□□□□ -0.88
VAPB-206ENST00000520497 GAS2L3Q86XJ1 694 aa9.54□□□□□ -0.88
VAPB-206ENST00000520497 FBXO16Q8IX29 292 aaPredicted RBP9.54□□□□□ -0.88
VAPB-206ENST00000520497 NEK9Q8TD19 979 aa9.54□□□□□ -0.88
VAPB-206ENST00000520497 SOCS4Q8WXH5 440 aa9.54□□□□□ -0.88
VAPB-206ENST00000520497 LARP4BQ92615 738 aaKnown RBP9.54□□□□□ -0.88
VAPB-206ENST00000520497 RAD54LQ92698 747 aa9.54□□□□□ -0.88
VAPB-206ENST00000520497 DYDC2Q96IM9 177 aa9.54□□□□□ -0.88
VAPB-206ENST00000520497 CDK5RAP3Q96JB5 506 aa9.54□□□□□ -0.88
VAPB-206ENST00000520497 PLIN2Q99541 437 aa9.54□□□□□ -0.88
VAPB-206ENST00000520497 TINF2Q9BSI4 451 aa9.54□□□□□ -0.88
VAPB-206ENST00000520497 BCAS3Q9H6U6 928 aa9.54□□□□□ -0.88
VAPB-206ENST00000520497 JPH1Q9HDC5 661 aaPredicted RBP9.54□□□□□ -0.88
VAPB-206ENST00000520497 VTA1Q9NP79 307 aa9.54□□□□□ -0.88
VAPB-206ENST00000520497 SLC5A4Q9NY91 659 aa9.54□□□□□ -0.88
VAPB-206ENST00000520497 RGL1Q9NZL6 768 aa9.54□□□□□ -0.88
VAPB-206ENST00000520497 SLC9A2Q9UBY0 812 aa9.54□□□□□ -0.88
VAPB-206ENST00000520497 KIAA1024Q9UPX6 916 aa9.54□□□□□ -0.88
VAPB-206ENST00000520497 PCDHA5Q9Y5H7 936 aa9.54□□□□□ -0.88
VAPB-206ENST00000520497 WDR64B1ANS9 1081 aa9.53□□□□□ -0.88
VAPB-206ENST00000520497 TNPO2O14787 897 aaKnown RBP9.53□□□□□ -0.88
VAPB-206ENST00000520497 FARP2O94887 1054 aaPredicted RBP9.53□□□□□ -0.88
VAPB-206ENST00000520497 SMC2O95347 1197 aa9.53□□□□□ -0.88
VAPB-206ENST00000520497 ATG7O95352 703 aa9.53□□□□□ -0.88
VAPB-206ENST00000520497 LYPLA2O95372 231 aa9.53□□□□□ -0.88
VAPB-206ENST00000520497 SNAI1O95863 264 aaPredicted RBP9.53□□□□□ -0.88
VAPB-206ENST00000520497 P4HBP07237 508 aaKnown RBP9.53□□□□□ -0.88
VAPB-206ENST00000520497 RGS2P41220 211 aa9.53□□□□□ -0.88
VAPB-206ENST00000520497 AFMP43652 599 aa9.53□□□□□ -0.88
VAPB-206ENST00000520497 FCGRTP55899 365 aa9.53□□□□□ -0.88
VAPB-206ENST00000520497 TPM4P67936 248 aa9.53□□□□□ -0.88
VAPB-206ENST00000520497 CYP4A11Q02928 519 aa9.53□□□□□ -0.88
VAPB-206ENST00000520497 TYRO3Q06418 890 aa9.53□□□□□ -0.88
VAPB-206ENST00000520497 NEDD9Q14511 834 aa9.53□□□□□ -0.88
VAPB-206ENST00000520497 MCM6Q14566 821 aa9.53□□□□□ -0.88
VAPB-206ENST00000520497 OLFML2BQ68BL8 750 aa9.53□□□□□ -0.88
VAPB-206ENST00000520497 TAPT1Q6NXT6 567 aa9.53□□□□□ -0.88
VAPB-206ENST00000520497 CNNM4Q6P4Q7 775 aa9.53□□□□□ -0.88
VAPB-206ENST00000520497 METTL7BQ6UX53 244 aa9.53□□□□□ -0.88
VAPB-206ENST00000520497 EEPD1Q7L9B9 569 aa9.53□□□□□ -0.88
VAPB-206ENST00000520497 SMAP1Q8IYB5 467 aaPredicted RBP9.53□□□□□ -0.88
VAPB-206ENST00000520497 GIMAP8Q8ND71 665 aaPredicted RBP9.53□□□□□ -0.88
VAPB-206ENST00000520497 TRIM47Q96LD4 638 aa9.53□□□□□ -0.88
VAPB-206ENST00000520497 APBA2Q99767 749 aa9.53□□□□□ -0.88
VAPB-206ENST00000520497 LXNQ9BS40 222 aa9.53□□□□□ -0.88
VAPB-206ENST00000520497 ARHGAP39Q9C0H5 1083 aa9.53□□□□□ -0.88
VAPB-206ENST00000520497 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.53□□□□□ -0.88
VAPB-206ENST00000520497 FLRT1Q9NZU1 646 aa9.53□□□□□ -0.88
VAPB-206ENST00000520497 WRAP73Q9P2S5 460 aaPredicted RBP9.53□□□□□ -0.88
VAPB-206ENST00000520497 DACH1Q9UI36 760 aa9.53□□□□□ -0.88
VAPB-206ENST00000520497 DDX41Q9UJV9 622 aaKnown RBP9.53□□□□□ -0.88
VAPB-206ENST00000520497 PCDHA10Q9Y5I2 948 aa9.53□□□□□ -0.88
VAPB-206ENST00000520497 SCN10AQ9Y5Y9 1956 aa9.52□□□□□ -0.89
VAPB-206ENST00000520497 IGKV6D-21A0A0A0MT36 114 aa9.52□□□□□ -0.89
VAPB-206ENST00000520497 E9PMD0 336 aa9.52□□□□□ -0.89
VAPB-206ENST00000520497 GOLGA6L19H0YKK7 550 aa9.52□□□□□ -0.89
VAPB-206ENST00000520497 FKTNO75072 461 aa9.52□□□□□ -0.89
VAPB-206ENST00000520497 EYA4O95677 639 aa9.52□□□□□ -0.89
VAPB-206ENST00000520497 CASP1P29466 404 aa9.52□□□□□ -0.89
VAPB-206ENST00000520497 SLC12A3P55017 1021 aa9.52□□□□□ -0.89
VAPB-206ENST00000520497 ACTR2P61160 394 aa9.52□□□□□ -0.89
VAPB-206ENST00000520497 PSMC6P62333 389 aa9.52□□□□□ -0.89
VAPB-206ENST00000520497 SP3Q02447 781 aa9.52□□□□□ -0.89
VAPB-206ENST00000520497 CCDC173Q0VFZ6 552 aa9.52□□□□□ -0.89
VAPB-206ENST00000520497 CUL4BQ13620 913 aa9.52□□□□□ -0.89
VAPB-206ENST00000520497 CTTNQ14247 550 aaKnown RBP9.52□□□□□ -0.89
VAPB-206ENST00000520497 TTLL4Q14679 1199 aa9.52□□□□□ -0.89
VAPB-206ENST00000520497 ABHD15Q6UXT9 468 aa9.52□□□□□ -0.89
VAPB-206ENST00000520497 SV2BQ7L1I2 683 aa9.52□□□□□ -0.89
VAPB-206ENST00000520497 CYFIP1Q7L576 1253 aa9.52□□□□□ -0.89
VAPB-206ENST00000520497 TRIML1Q8N9V2 468 aa9.52□□□□□ -0.89
VAPB-206ENST00000520497 BANK1Q8NDB2 785 aa9.52□□□□□ -0.89
VAPB-206ENST00000520497 FAM200AQ8TCP9 573 aa9.52□□□□□ -0.89
VAPB-206ENST00000520497 CD99L2Q8TCZ2 262 aa9.52□□□□□ -0.89
VAPB-206ENST00000520497 SCFD2Q8WU76 684 aa9.52□□□□□ -0.89
VAPB-206ENST00000520497 STAMQ92783 540 aa9.52□□□□□ -0.89
VAPB-206ENST00000520497 SMARCE1Q969G3 411 aa9.52□□□□□ -0.89
VAPB-206ENST00000520497 GSDMAQ96QA5 445 aa9.52□□□□□ -0.89
VAPB-206ENST00000520497 C7orf25Q9BPX7 421 aa9.52□□□□□ -0.89
VAPB-206ENST00000520497 TRIM9Q9C026 710 aa9.52□□□□□ -0.89
VAPB-206ENST00000520497 ABHD16BQ9H3Z7 469 aa9.52□□□□□ -0.89
VAPB-206ENST00000520497 PDGFCQ9NRA1 345 aa9.52□□□□□ -0.89
VAPB-206ENST00000520497 TCEAL9Q9UHQ7 104 aa9.52□□□□□ -0.89
VAPB-206ENST00000520497 TELO2Q9Y4R8 837 aa9.52□□□□□ -0.89
VAPB-206ENST00000520497 IGSF9BQ9UPX0 1349 aa9.52□□□□□ -0.89
VAPB-206ENST00000520497 A0A087WWV3 80 aa9.51□□□□□ -0.89
VAPB-206ENST00000520497 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.51□□□□□ -0.89
VAPB-206ENST00000520497 MYMKA6NI61 221 aa9.51□□□□□ -0.89
VAPB-206ENST00000520497 KLRC4O43908 158 aa9.51□□□□□ -0.89
VAPB-206ENST00000520497 ECM2O94769 699 aaPredicted RBP9.51□□□□□ -0.89
VAPB-206ENST00000520497 GGPS1O95749 300 aa9.51□□□□□ -0.89
VAPB-206ENST00000520497 PSAPP07602 524 aa9.51□□□□□ -0.89
VAPB-206ENST00000520497 SUPT20HL2P0C7V6 817 aa9.51□□□□□ -0.89
VAPB-206ENST00000520497 PLA2G4BP0C869 781 aa9.51□□□□□ -0.89
VAPB-206ENST00000520497 XRCC5P13010 732 aaKnown RBP9.51□□□□□ -0.89
VAPB-206ENST00000520497 CD44P16070 742 aaKnown RBP9.51□□□□□ -0.89
VAPB-206ENST00000520497 BMP6P22004 513 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms