RNA–Protein interactions for RNA: ENST00000520467.5

SCUBE2-207, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCUBE2, Length 3,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-207ENST00000520467 TEX11Q8IYF3 940 aa17.93■□□□□ 0.46
SCUBE2-207ENST00000520467 NSUN4Q96CB9 384 aaKnown RBP17.93■□□□□ 0.46
SCUBE2-207ENST00000520467 CAND2O75155 1236 aa17.93■□□□□ 0.46
SCUBE2-207ENST00000520467 SLC8A1P32418 973 aa17.93■□□□□ 0.46
SCUBE2-207ENST00000520467 FKBP3Q00688 224 aaKnown RBP17.93■□□□□ 0.46
SCUBE2-207ENST00000520467 KRT25Q7Z3Z0 450 aa17.93■□□□□ 0.46
SCUBE2-207ENST00000520467 CCDC197Q8NCU1 140 aa17.93■□□□□ 0.46
SCUBE2-207ENST00000520467 CHMP6Q96FZ7 201 aa17.93■□□□□ 0.46
SCUBE2-207ENST00000520467 PNMA5Q96PV4 448 aa17.93■□□□□ 0.46
SCUBE2-207ENST00000520467 CICQ96RK0 1608 aaPredicted RBP17.92■□□□□ 0.46
SCUBE2-207ENST00000520467 TRIM37O94972 964 aa17.92■□□□□ 0.46
SCUBE2-207ENST00000520467 TDP2O95551 362 aa17.92■□□□□ 0.46
SCUBE2-207ENST00000520467 ATP6V1G2O95670 118 aa17.92■□□□□ 0.46
SCUBE2-207ENST00000520467 VIMP08670 466 aaKnown RBP17.92■□□□□ 0.46
SCUBE2-207ENST00000520467 DRD4P21917 467 aa17.92■□□□□ 0.46
SCUBE2-207ENST00000520467 ELF3P78545 371 aaPredicted RBP17.92■□□□□ 0.46
SCUBE2-207ENST00000520467 USP17L2Q6R6M4 530 aa17.92■□□□□ 0.46
SCUBE2-207ENST00000520467 CCT6BQ92526 530 aa17.92■□□□□ 0.46
SCUBE2-207ENST00000520467 NHSL1Q5SYE7 1610 aa17.92■□□□□ 0.46
SCUBE2-207ENST00000520467 PLCH1Q4KWH8 1693 aa17.92■□□□□ 0.46
SCUBE2-207ENST00000520467 GNAQP50148 359 aa17.92■□□□□ 0.46
SCUBE2-207ENST00000520467 GRM4Q14833 912 aa17.92■□□□□ 0.46
SCUBE2-207ENST00000520467 SF3B3Q15393 1217 aaKnown RBP17.92■□□□□ 0.46
SCUBE2-207ENST00000520467 SMIM5Q71RC9 77 aa17.92■□□□□ 0.46
SCUBE2-207ENST00000520467 TMC3Q7Z5M5 1100 aa17.92■□□□□ 0.46
SCUBE2-207ENST00000520467 CCDC63Q8NA47 563 aa17.92■□□□□ 0.46
SCUBE2-207ENST00000520467 ELAC2Q9BQ52 826 aaKnown RBP17.92■□□□□ 0.46
SCUBE2-207ENST00000520467 C6orf50Q9HD87 102 aa17.92■□□□□ 0.46
SCUBE2-207ENST00000520467 CD2APQ9Y5K6 639 aa17.92■□□□□ 0.46
SCUBE2-207ENST00000520467 DOT1LQ8TEK3 1739 aa17.92■□□□□ 0.46
SCUBE2-207ENST00000520467 F8W031 263 aaPredicted RBP17.92■□□□□ 0.46
SCUBE2-207ENST00000520467 MMEP08473 750 aa17.92■□□□□ 0.46
SCUBE2-207ENST00000520467 USP11P51784 963 aa17.92■□□□□ 0.46
SCUBE2-207ENST00000520467 SEMA3FQ13275 785 aa17.92■□□□□ 0.46
SCUBE2-207ENST00000520467 MTMR3Q13615 1198 aa17.92■□□□□ 0.46
SCUBE2-207ENST00000520467 XPO6Q96QU8 1125 aaKnown RBP17.92■□□□□ 0.46
SCUBE2-207ENST00000520467 UBA5Q9GZZ9 404 aa17.92■□□□□ 0.46
SCUBE2-207ENST00000520467 ARPP21Q9UBL0 812 aaPredicted RBP17.92■□□□□ 0.46
SCUBE2-207ENST00000520467 SAP30BPQ9UHR5 308 aaKnown RBP17.92■□□□□ 0.46
SCUBE2-207ENST00000520467 SLC37A4O43826 429 aa17.91■□□□□ 0.46
SCUBE2-207ENST00000520467 SHBGP04278 402 aa17.91■□□□□ 0.46
SCUBE2-207ENST00000520467 MYBP10242 640 aa17.91■□□□□ 0.46
SCUBE2-207ENST00000520467 CHN1P15882 459 aa17.91■□□□□ 0.46
SCUBE2-207ENST00000520467 KCNQ4P56696 695 aa17.91■□□□□ 0.46
SCUBE2-207ENST00000520467 ZNF444Q8N0Y2 327 aaPredicted RBP17.91■□□□□ 0.46
SCUBE2-207ENST00000520467 ANKS4BQ8N8V4 417 aa17.91■□□□□ 0.46
SCUBE2-207ENST00000520467 C1orf131Q8NDD1 294 aaKnown RBP17.91■□□□□ 0.46
SCUBE2-207ENST00000520467 TRIM6Q9C030 488 aaPredicted RBP17.91■□□□□ 0.46
SCUBE2-207ENST00000520467 NUCKS1Q9H1E3 243 aaKnown RBP17.91■□□□□ 0.46
SCUBE2-207ENST00000520467 UTP11Q9Y3A2 253 aaKnown RBP17.91■□□□□ 0.46
SCUBE2-207ENST00000520467 SLCO1A2P46721 670 aa17.91■□□□□ 0.46
SCUBE2-207ENST00000520467 XRCC4Q13426 336 aa17.91■□□□□ 0.46
SCUBE2-207ENST00000520467 TMEM266Q2M3C6 531 aa17.91■□□□□ 0.46
SCUBE2-207ENST00000520467 LRCH2Q5VUJ6 765 aa17.91■□□□□ 0.46
SCUBE2-207ENST00000520467 KRT79Q5XKE5 535 aa17.91■□□□□ 0.46
SCUBE2-207ENST00000520467 NAIF1Q69YI7 327 aaPredicted RBP17.91■□□□□ 0.46
SCUBE2-207ENST00000520467 SCFD2Q8WU76 684 aa17.91■□□□□ 0.46
SCUBE2-207ENST00000520467 NSMCE1Q8WV22 266 aa17.91■□□□□ 0.46
SCUBE2-207ENST00000520467 RSRC1Q96IZ7 334 aaKnown RBP17.91■□□□□ 0.46
SCUBE2-207ENST00000520467 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.91■□□□□ 0.46
SCUBE2-207ENST00000520467 TMEM59LQ9UK28 342 aa17.91■□□□□ 0.46
SCUBE2-207ENST00000520467 NPHP3-ACAD11A0A0J9YXS1 232 aa17.9■□□□□ 0.46
SCUBE2-207ENST00000520467 PVALEFA0A1B0GWK0 134 aa17.9■□□□□ 0.46
SCUBE2-207ENST00000520467 CCT8L1PA6NM43 557 aa17.9■□□□□ 0.46
SCUBE2-207ENST00000520467 F8VZ95 297 aa17.9■□□□□ 0.46
SCUBE2-207ENST00000520467 KCNQ2O43526 872 aa17.9■□□□□ 0.46
SCUBE2-207ENST00000520467 COASYQ13057 564 aa17.9■□□□□ 0.46
SCUBE2-207ENST00000520467 ZNF571Q7Z3V5 609 aaPredicted RBP17.9■□□□□ 0.46
SCUBE2-207ENST00000520467 FBXO33Q7Z6M2 555 aa17.9■□□□□ 0.46
SCUBE2-207ENST00000520467 TAX1BP1Q86VP1 789 aa17.9■□□□□ 0.46
SCUBE2-207ENST00000520467 SEC63Q9UGP8 760 aaKnown RBP17.9■□□□□ 0.46
SCUBE2-207ENST00000520467 EIF4E1BA6NMX2 242 aaKnown RBP17.9■□□□□ 0.46
SCUBE2-207ENST00000520467 SLC9A1P19634 815 aa17.9■□□□□ 0.46
SCUBE2-207ENST00000520467 PEX19P40855 299 aa17.9■□□□□ 0.46
SCUBE2-207ENST00000520467 FAM26FQ5R3K3 315 aa17.9■□□□□ 0.46
SCUBE2-207ENST00000520467 TCERG1LQ5VWI1 586 aa17.9■□□□□ 0.46
SCUBE2-207ENST00000520467 ALKBH5Q6P6C2 394 aaKnown RBP17.9■□□□□ 0.46
SCUBE2-207ENST00000520467 REXO1Q8N1G1 1221 aaKnown RBP17.9■□□□□ 0.46
SCUBE2-207ENST00000520467 TMEM47Q9BQJ4 181 aa17.9■□□□□ 0.46
SCUBE2-207ENST00000520467 CDCA7Q9BWT1 371 aaPredicted RBP17.9■□□□□ 0.46
SCUBE2-207ENST00000520467 SWAP70Q9UH65 585 aa17.9■□□□□ 0.46
SCUBE2-207ENST00000520467 AGBL2Q5U5Z8 902 aa17.89■□□□□ 0.46
SCUBE2-207ENST00000520467 DZIP1Q86YF9 867 aaKnown RBP17.89■□□□□ 0.46
SCUBE2-207ENST00000520467 CCDC24Q8N4L8 307 aa17.89■□□□□ 0.46
SCUBE2-207ENST00000520467 CCDC26Q8TAB7 109 aa17.89■□□□□ 0.46
SCUBE2-207ENST00000520467 RAD54LQ92698 747 aa17.89■□□□□ 0.46
SCUBE2-207ENST00000520467 CUL5Q93034 780 aa17.89■□□□□ 0.46
SCUBE2-207ENST00000520467 FAXDC2Q96IV6 333 aa17.89■□□□□ 0.46
SCUBE2-207ENST00000520467 PBKQ96KB5 322 aa17.89■□□□□ 0.46
SCUBE2-207ENST00000520467 FMO2Q99518 471 aa17.89■□□□□ 0.46
SCUBE2-207ENST00000520467 ATP8A2Q9NTI2 1148 aa17.89■□□□□ 0.46
SCUBE2-207ENST00000520467 PANK4Q9NVE7 773 aa17.89■□□□□ 0.46
SCUBE2-207ENST00000520467 MYH14Q7Z406 1995 aaKnown RBP17.89■□□□□ 0.45
SCUBE2-207ENST00000520467 FGGP02679 453 aa17.89■□□□□ 0.45
SCUBE2-207ENST00000520467 HIBADHP31937 336 aaKnown RBP17.89■□□□□ 0.45
SCUBE2-207ENST00000520467 MRPL12P52815 198 aaKnown RBP17.89■□□□□ 0.45
SCUBE2-207ENST00000520467 DCAF17Q5H9S7 520 aaPredicted RBP17.89■□□□□ 0.45
SCUBE2-207ENST00000520467 CLEC4GQ6UXB4 293 aa17.89■□□□□ 0.45
SCUBE2-207ENST00000520467 DGKHQ86XP1 1220 aa17.89■□□□□ 0.45
SCUBE2-207ENST00000520467 PIGSQ96S52 555 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms