RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 KRTAP10-2P60368 255 aa6.62□□□□□ -1.35
SKP1-207ENST00000520417 PPP2CBP62714 309 aa6.62□□□□□ -1.35
SKP1-207ENST00000520417 PPP2CAP67775 309 aa6.62□□□□□ -1.35
SKP1-207ENST00000520417 RALYLQ86SE5 291 aaKnown RBP6.62□□□□□ -1.35
SKP1-207ENST00000520417 CISD2Q8N5K1 135 aaKnown RBP6.62□□□□□ -1.35
SKP1-207ENST00000520417 MBD6Q96DN6 1003 aa6.62□□□□□ -1.35
SKP1-207ENST00000520417 SRPK3Q9UPE1 567 aa6.62□□□□□ -1.35
SKP1-207ENST00000520417 FAM90A27PA6NNH2 459 aa6.61□□□□□ -1.35
SKP1-207ENST00000520417 H0Y858 1186 aa6.61□□□□□ -1.35
SKP1-207ENST00000520417 COL6A1P12109 1028 aa6.61□□□□□ -1.35
SKP1-207ENST00000520417 ADAM17P78536 824 aa6.61□□□□□ -1.35
SKP1-207ENST00000520417 SERINC3Q13530 473 aa6.61□□□□□ -1.35
SKP1-207ENST00000520417 C16orf59Q7L2K0 433 aa6.61□□□□□ -1.35
SKP1-207ENST00000520417 ARMC5Q96C12 935 aa6.61□□□□□ -1.35
SKP1-207ENST00000520417 SAMD11Q96NU1 681 aa6.61□□□□□ -1.35
SKP1-207ENST00000520417 PTPN18Q99952 460 aa6.61□□□□□ -1.35
SKP1-207ENST00000520417 KRTAP4-2Q9BYR5 136 aa6.61□□□□□ -1.35
SKP1-207ENST00000520417 PPP4R1LQ9P1A2 415 aa6.61□□□□□ -1.35
SKP1-207ENST00000520417 ESYT3A0FGR9 886 aa6.6□□□□□ -1.35
SKP1-207ENST00000520417 ARVCFO00192 962 aa6.6□□□□□ -1.35
SKP1-207ENST00000520417 MAN2B1O00754 1011 aa6.6□□□□□ -1.35
SKP1-207ENST00000520417 KLHL18O94889 574 aa6.6□□□□□ -1.35
SKP1-207ENST00000520417 IL18BPO95998 194 aa6.6□□□□□ -1.35
SKP1-207ENST00000520417 KNG1P01042 644 aa6.6□□□□□ -1.35
SKP1-207ENST00000520417 AMY2AP04746 511 aa6.6□□□□□ -1.35
SKP1-207ENST00000520417 AMY2BP19961 511 aa6.6□□□□□ -1.35
SKP1-207ENST00000520417 RBL2Q08999 1139 aa6.6□□□□□ -1.35
SKP1-207ENST00000520417 DBPQ10586 325 aaPredicted RBP6.6□□□□□ -1.35
SKP1-207ENST00000520417 SF3A1Q15459 793 aaKnown RBP6.6□□□□□ -1.35
SKP1-207ENST00000520417 Q6ZUG5 572 aa6.6□□□□□ -1.35
SKP1-207ENST00000520417 DNAJC2Q99543 621 aaKnown RBP6.6□□□□□ -1.35
SKP1-207ENST00000520417 KRTAP4-11Q9BYQ6 195 aa6.6□□□□□ -1.35
SKP1-207ENST00000520417 SLC52A2Q9HAB3 445 aa6.6□□□□□ -1.35
SKP1-207ENST00000520417 KCND1Q9NSA2 647 aa6.6□□□□□ -1.35
SKP1-207ENST00000520417 JAG2Q9Y219 1238 aa6.6□□□□□ -1.35
SKP1-207ENST00000520417 RASGRP1O95267 797 aa6.59□□□□□ -1.35
SKP1-207ENST00000520417 LONRF2Q1L5Z9 754 aa6.59□□□□□ -1.35
SKP1-207ENST00000520417 WDR72Q3MJ13 1102 aa6.59□□□□□ -1.35
SKP1-207ENST00000520417 SOGA3Q5TF21 947 aa6.59□□□□□ -1.35
SKP1-207ENST00000520417 CPZQ66K79 652 aa6.59□□□□□ -1.35
SKP1-207ENST00000520417 PKN3Q6P5Z2 889 aa6.59□□□□□ -1.35
SKP1-207ENST00000520417 CIR1Q86X95 450 aaPredicted RBP6.59□□□□□ -1.35
SKP1-207ENST00000520417 IFNL2Q8IZJ0 200 aa6.59□□□□□ -1.35
SKP1-207ENST00000520417 MAGEB10Q96LZ2 347 aaPredicted RBP6.59□□□□□ -1.35
SKP1-207ENST00000520417 DEF6Q9H4E7 631 aa6.59□□□□□ -1.35
SKP1-207ENST00000520417 ADAM29Q9UKF5 820 aa6.59□□□□□ -1.35
SKP1-207ENST00000520417 COQ6Q9Y2Z9 468 aa6.59□□□□□ -1.35
SKP1-207ENST00000520417 SCDO00767 359 aa6.58□□□□□ -1.36
SKP1-207ENST00000520417 EFCAB14O75071 495 aa6.58□□□□□ -1.36
SKP1-207ENST00000520417 CHGBP05060 677 aa6.58□□□□□ -1.36
SKP1-207ENST00000520417 RRADP55042 308 aa6.58□□□□□ -1.36
SKP1-207ENST00000520417 ZNF568Q3ZCX4 644 aa6.58□□□□□ -1.36
SKP1-207ENST00000520417 FIGNQ5HY92 759 aa6.58□□□□□ -1.36
SKP1-207ENST00000520417 ZNF585AQ6P3V2 769 aa6.58□□□□□ -1.36
SKP1-207ENST00000520417 DPP8Q6V1X1 898 aaPredicted RBP6.58□□□□□ -1.36
SKP1-207ENST00000520417 LRP10Q7Z4F1 713 aa6.58□□□□□ -1.36
SKP1-207ENST00000520417 WDR48Q8TAF3 677 aa6.58□□□□□ -1.36
SKP1-207ENST00000520417 KISS1RQ969F8 398 aaPredicted RBP6.58□□□□□ -1.36
SKP1-207ENST00000520417 LRRC37BQ96QE4 947 aa6.58□□□□□ -1.36
SKP1-207ENST00000520417 SFMBT1Q9UHJ3 866 aa6.58□□□□□ -1.36
SKP1-207ENST00000520417 ZNF20P17024 532 aa6.57□□□□□ -1.36
SKP1-207ENST00000520417 GJA4P35212 333 aa6.57□□□□□ -1.36
SKP1-207ENST00000520417 ADCY8P40145 1251 aa6.57□□□□□ -1.36
SKP1-207ENST00000520417 ICAM4Q14773 271 aa6.57□□□□□ -1.36
SKP1-207ENST00000520417 ZC3H12BQ5HYM0 836 aaKnown RBP6.57□□□□□ -1.36
SKP1-207ENST00000520417 SLFN13Q68D06 897 aa6.57□□□□□ -1.36
SKP1-207ENST00000520417 ZSWIM2Q8NEG5 633 aa6.57□□□□□ -1.36
SKP1-207ENST00000520417 SSBP3Q9BWW4 388 aaPredicted RBP6.57□□□□□ -1.36
SKP1-207ENST00000520417 PDGFDQ9GZP0 370 aaPredicted RBP6.57□□□□□ -1.36
SKP1-207ENST00000520417 PTPN22Q9Y2R2 807 aa6.57□□□□□ -1.36
SKP1-207ENST00000520417 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.56□□□□□ -1.36
SKP1-207ENST00000520417 ZNF561-AS1K7EIQ3 104 aa6.56□□□□□ -1.36
SKP1-207ENST00000520417 WNT9AO14904 365 aa6.56□□□□□ -1.36
SKP1-207ENST00000520417 GPR42O15529 346 aa6.56□□□□□ -1.36
SKP1-207ENST00000520417 ZNF888P0CJ79 500 aaPredicted RBP6.56□□□□□ -1.36
SKP1-207ENST00000520417 PTGS1P23219 599 aa6.56□□□□□ -1.36
SKP1-207ENST00000520417 MC4RP32245 332 aa6.56□□□□□ -1.36
SKP1-207ENST00000520417 CSF2RBP32927 897 aa6.56□□□□□ -1.36
SKP1-207ENST00000520417 EPHB4P54760 987 aa6.56□□□□□ -1.36
SKP1-207ENST00000520417 USP10Q14694 798 aaKnown RBP6.56□□□□□ -1.36
SKP1-207ENST00000520417 PALM2Q8IXS6 379 aa6.56□□□□□ -1.36
SKP1-207ENST00000520417 TTC9BQ8N6N2 239 aa6.56□□□□□ -1.36
SKP1-207ENST00000520417 GIMAP8Q8ND71 665 aaPredicted RBP6.56□□□□□ -1.36
SKP1-207ENST00000520417 SLC7A14Q8TBB6 771 aa6.56□□□□□ -1.36
SKP1-207ENST00000520417 GNRHR2Q96P88 292 aa6.56□□□□□ -1.36
SKP1-207ENST00000520417 LMF1Q96S06 567 aa6.56□□□□□ -1.36
SKP1-207ENST00000520417 SMURF1Q9HCE7 757 aa6.56□□□□□ -1.36
SKP1-207ENST00000520417 UCKL1Q9NWZ5 548 aa6.56□□□□□ -1.36
SKP1-207ENST00000520417 C4BPAP04003 597 aaKnown RBP6.55□□□□□ -1.36
SKP1-207ENST00000520417 BMS1Q14692 1282 aaKnown RBP6.55□□□□□ -1.36
SKP1-207ENST00000520417 BRAPQ7Z569 592 aa6.55□□□□□ -1.36
SKP1-207ENST00000520417 THAP3Q8WTV1 239 aaPredicted RBP6.55□□□□□ -1.36
SKP1-207ENST00000520417 DVL3Q92997 716 aaPredicted RBP6.55□□□□□ -1.36
SKP1-207ENST00000520417 AJUBAQ96IF1 538 aa6.55□□□□□ -1.36
SKP1-207ENST00000520417 CARD11Q9BXL7 1154 aa6.55□□□□□ -1.36
SKP1-207ENST00000520417 INCENPQ9NQS7 918 aa6.55□□□□□ -1.36
SKP1-207ENST00000520417 MYRFQ9Y2G1 1151 aa6.55□□□□□ -1.36
SKP1-207ENST00000520417 PTCH2Q9Y6C5 1203 aa6.55□□□□□ -1.36
SKP1-207ENST00000520417 CLASP2O75122 1294 aaKnown RBP6.54□□□□□ -1.36
SKP1-207ENST00000520417 KRT37O76014 449 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms