RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 ATP2B2Q01814 1243 aa9.04□□□□□ -0.96
CTHRC1-203ENST00000520337 DNM1Q05193 864 aaKnown RBP9.04□□□□□ -0.96
CTHRC1-203ENST00000520337 KLRC3Q07444 240 aa9.04□□□□□ -0.96
CTHRC1-203ENST00000520337 PFKFB3Q16875 520 aaPredicted RBP9.04□□□□□ -0.96
CTHRC1-203ENST00000520337 FOXD4L6Q3SYB3 417 aaPredicted RBP9.04□□□□□ -0.96
CTHRC1-203ENST00000520337 FAM26DQ5JW98 314 aa9.04□□□□□ -0.96
CTHRC1-203ENST00000520337 KIAA1755Q5JYT7 1200 aa9.04□□□□□ -0.96
CTHRC1-203ENST00000520337 L1TD1Q5T7N2 865 aaKnown RBP9.04□□□□□ -0.96
CTHRC1-203ENST00000520337 MCTP1Q6DN14 999 aa9.04□□□□□ -0.96
CTHRC1-203ENST00000520337 TTBK2Q6IQ55 1244 aa9.04□□□□□ -0.96
CTHRC1-203ENST00000520337 SHISA2Q6UWI4 295 aa9.04□□□□□ -0.96
CTHRC1-203ENST00000520337 DLK2Q6UY11 383 aa9.04□□□□□ -0.96
CTHRC1-203ENST00000520337 FOXD4L3Q6VB84 417 aaPredicted RBP9.04□□□□□ -0.96
CTHRC1-203ENST00000520337 USP50Q70EL3 339 aaPredicted RBP9.04□□□□□ -0.96
CTHRC1-203ENST00000520337 ACER1Q8TDN7 264 aa9.04□□□□□ -0.96
CTHRC1-203ENST00000520337 DCAF4Q8WV16 495 aa9.04□□□□□ -0.96
CTHRC1-203ENST00000520337 ZSCAN16Q9H4T2 348 aaPredicted RBP9.04□□□□□ -0.96
CTHRC1-203ENST00000520337 RIOX1Q9H6W3 641 aa9.04□□□□□ -0.96
CTHRC1-203ENST00000520337 GINM1Q9NU53 330 aa9.04□□□□□ -0.96
CTHRC1-203ENST00000520337 LMBRD1Q9NUN5 540 aa9.04□□□□□ -0.96
CTHRC1-203ENST00000520337 CNPY2Q9Y2B0 182 aa9.04□□□□□ -0.96
CTHRC1-203ENST00000520337 ATP6V1DQ9Y5K8 247 aa9.04□□□□□ -0.96
CTHRC1-203ENST00000520337 FRMPD2Q68DX3 1309 aaPredicted RBP9.04□□□□□ -0.96
CTHRC1-203ENST00000520337 DYRK3O43781 588 aa9.03□□□□□ -0.96
CTHRC1-203ENST00000520337 NDUFB10O96000 172 aa9.03□□□□□ -0.96
CTHRC1-203ENST00000520337 MMP1P03956 469 aa9.03□□□□□ -0.96
CTHRC1-203ENST00000520337 ASNSP08243 561 aa9.03□□□□□ -0.96
CTHRC1-203ENST00000520337 H2AFB1P0C5Y9 115 aa9.03□□□□□ -0.96
CTHRC1-203ENST00000520337 H2AFB2P0C5Z0 115 aa9.03□□□□□ -0.96
CTHRC1-203ENST00000520337 SCG2P13521 617 aa9.03□□□□□ -0.96
CTHRC1-203ENST00000520337 U2AF2P26368 475 aaKnown RBP eCLIP9.03□□□□□ -0.96
CTHRC1-203ENST00000520337 ECE1P42892 770 aa9.03□□□□□ -0.96
CTHRC1-203ENST00000520337 AKAP17AQ02040 695 aaKnown RBP9.03□□□□□ -0.96
CTHRC1-203ENST00000520337 KIF23Q02241 960 aaPredicted RBP9.03□□□□□ -0.96
CTHRC1-203ENST00000520337 NPY5RQ15761 445 aa9.03□□□□□ -0.96
CTHRC1-203ENST00000520337 DCAF15Q66K64 600 aa9.03□□□□□ -0.96
CTHRC1-203ENST00000520337 SLFN13Q68D06 897 aa9.03□□□□□ -0.96
CTHRC1-203ENST00000520337 IGF2-ASQ6U949 168 aa9.03□□□□□ -0.96
CTHRC1-203ENST00000520337 TMEM87AQ8NBN3 555 aa9.03□□□□□ -0.96
CTHRC1-203ENST00000520337 OR13H1Q8NG92 308 aa9.03□□□□□ -0.96
CTHRC1-203ENST00000520337 NSUN5Q96P11 429 aaKnown RBP9.03□□□□□ -0.96
CTHRC1-203ENST00000520337 PHF20Q9BVI0 1012 aa9.03□□□□□ -0.96
CTHRC1-203ENST00000520337 ZNF341Q9BYN7 854 aa9.03□□□□□ -0.96
CTHRC1-203ENST00000520337 GLIS2Q9BZE0 524 aaPredicted RBP9.03□□□□□ -0.96
CTHRC1-203ENST00000520337 UBA5Q9GZZ9 404 aa9.03□□□□□ -0.96
CTHRC1-203ENST00000520337 TAF1DQ9H5J8 278 aaPredicted RBP9.03□□□□□ -0.96
CTHRC1-203ENST00000520337 VPS54Q9P1Q0 977 aa9.03□□□□□ -0.96
CTHRC1-203ENST00000520337 KCNJ14Q9UNX9 436 aa9.03□□□□□ -0.96
CTHRC1-203ENST00000520337 TMX2Q9Y320 296 aa9.03□□□□□ -0.96
CTHRC1-203ENST00000520337 RLFQ13129 1914 aa9.03□□□□□ -0.96
CTHRC1-203ENST00000520337 ADM5C9JUS6 153 aa9.02□□□□□ -0.97
CTHRC1-203ENST00000520337 J3QW42 95 aa9.02□□□□□ -0.97
CTHRC1-203ENST00000520337 PRPF40AO75400 957 aaKnown RBP9.02□□□□□ -0.97
CTHRC1-203ENST00000520337 USP2O75604 605 aaPredicted RBP9.02□□□□□ -0.97
CTHRC1-203ENST00000520337 SUPT20HL1Q3ZLR7 823 aa9.02□□□□□ -0.97
CTHRC1-203ENST00000520337 GPATCH4Q5T3I0 446 aaKnown RBP9.02□□□□□ -0.97
CTHRC1-203ENST00000520337 KCTD1Q719H9 257 aa9.02□□□□□ -0.97
CTHRC1-203ENST00000520337 CCDC84Q86UT8 332 aaPredicted RBP9.02□□□□□ -0.97
CTHRC1-203ENST00000520337 USP48Q86UV5 1035 aa9.02□□□□□ -0.97
CTHRC1-203ENST00000520337 MAP4K3Q8IVH8 894 aa9.02□□□□□ -0.97
CTHRC1-203ENST00000520337 FAM43AQ8N2R8 423 aa9.02□□□□□ -0.97
CTHRC1-203ENST00000520337 PIBF1Q8WXW3 757 aa9.02□□□□□ -0.97
CTHRC1-203ENST00000520337 DCPSQ96C86 337 aaKnown RBP9.02□□□□□ -0.97
CTHRC1-203ENST00000520337 HOOK2Q96ED9 719 aa9.02□□□□□ -0.97
CTHRC1-203ENST00000520337 MTMR8Q96EF0 704 aa9.02□□□□□ -0.97
CTHRC1-203ENST00000520337 PIGSQ96S52 555 aa9.02□□□□□ -0.97
CTHRC1-203ENST00000520337 VAT1LQ9HCJ6 419 aa9.02□□□□□ -0.97
CTHRC1-203ENST00000520337 SH3GLB2Q9NR46 395 aa9.02□□□□□ -0.97
CTHRC1-203ENST00000520337 FZD1Q9UP38 647 aa9.02□□□□□ -0.97
CTHRC1-203ENST00000520337 MYH7BA7E2Y1 1941 aa9.01□□□□□ -0.97
CTHRC1-203ENST00000520337 IQCA1LA6NCM1 817 aa9.01□□□□□ -0.97
CTHRC1-203ENST00000520337 BTBD18B2RXH4 712 aa9.01□□□□□ -0.97
CTHRC1-203ENST00000520337 STXBP3O00186 592 aa9.01□□□□□ -0.97
CTHRC1-203ENST00000520337 ADAMTS3O15072 1205 aa9.01□□□□□ -0.97
CTHRC1-203ENST00000520337 SLC16A2P36021 539 aa9.01□□□□□ -0.97
CTHRC1-203ENST00000520337 SLC1A4P43007 532 aa9.01□□□□□ -0.97
CTHRC1-203ENST00000520337 TRIM29Q14134 588 aa9.01□□□□□ -0.97
CTHRC1-203ENST00000520337 CCDC96Q2M329 555 aa9.01□□□□□ -0.97
CTHRC1-203ENST00000520337 WWC2Q6AWC2 1192 aa9.01□□□□□ -0.97
CTHRC1-203ENST00000520337 BTNL9Q6UXG8 535 aa9.01□□□□□ -0.97
CTHRC1-203ENST00000520337 KRT26Q7Z3Y9 468 aa9.01□□□□□ -0.97
CTHRC1-203ENST00000520337 BRAPQ7Z569 592 aa9.01□□□□□ -0.97
CTHRC1-203ENST00000520337 ADGRF4Q8IZF3 695 aa9.01□□□□□ -0.97
CTHRC1-203ENST00000520337 ZKSCAN4Q969J2 545 aaPredicted RBP9.01□□□□□ -0.97
CTHRC1-203ENST00000520337 RRP36Q96EU6 259 aaKnown RBP9.01□□□□□ -0.97
CTHRC1-203ENST00000520337 NUP88Q99567 741 aaPredicted RBP9.01□□□□□ -0.97
CTHRC1-203ENST00000520337 MUC3BQ9H195 1237 aa9.01□□□□□ -0.97
CTHRC1-203ENST00000520337 FOXP1Q9H334 677 aaPredicted RBP9.01□□□□□ -0.97
CTHRC1-203ENST00000520337 VCPKMTQ9H867 229 aa9.01□□□□□ -0.97
CTHRC1-203ENST00000520337 JMJD4Q9H9V9 463 aa9.01□□□□□ -0.97
CTHRC1-203ENST00000520337 COL11A1P12107 1806 aaPredicted RBP9.01□□□□□ -0.97
CTHRC1-203ENST00000520337 PNMA6FA0A0J9YX94 578 aa9□□□□□ -0.97
CTHRC1-203ENST00000520337 GOLGA6L22H0YM25 854 aa9□□□□□ -0.97
CTHRC1-203ENST00000520337 PPP1R11O60927 126 aaPredicted RBP9□□□□□ -0.97
CTHRC1-203ENST00000520337 GADD45BO75293 160 aaPredicted RBP9□□□□□ -0.97
CTHRC1-203ENST00000520337 RPLP1P05386 114 aaKnown RBP9□□□□□ -0.97
CTHRC1-203ENST00000520337 BMP3P12645 472 aa9□□□□□ -0.97
CTHRC1-203ENST00000520337 XBP1P17861 261 aa9□□□□□ -0.97
CTHRC1-203ENST00000520337 TOB1P50616 345 aaPredicted RBP9□□□□□ -0.97
CTHRC1-203ENST00000520337 KRT85P78386 507 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms