RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 C6orf50Q9HD87 102 aa28.88■■■□□ 2.21
VEGFA-220ENST00000519767 TUBE1Q9UJT0 475 aa28.88■■■□□ 2.21
VEGFA-220ENST00000519767 LINC01553A4QN01 128 aa28.87■■■□□ 2.21
VEGFA-220ENST00000519767 CHRNA1P02708 482 aa28.87■■■□□ 2.21
VEGFA-220ENST00000519767 ACTR2P61160 394 aa28.87■■■□□ 2.21
VEGFA-220ENST00000519767 HTRA4P83105 476 aaPredicted RBP28.87■■■□□ 2.21
VEGFA-220ENST00000519767 GRB10Q13322 594 aa28.87■■■□□ 2.21
VEGFA-220ENST00000519767 AAK1Q2M2I8 961 aa28.87■■■□□ 2.21
VEGFA-220ENST00000519767 TOP1MTQ969P6 601 aa28.87■■■□□ 2.21
VEGFA-220ENST00000519767 PGBD1Q96JS3 809 aa28.87■■■□□ 2.21
VEGFA-220ENST00000519767 ZMYND12Q9H0C1 365 aa28.87■■■□□ 2.21
VEGFA-220ENST00000519767 TMEM260Q9NX78 707 aa28.87■■■□□ 2.21
VEGFA-220ENST00000519767 PRRC2BQ5JSZ5 2229 aaKnown RBP28.86■■■□□ 2.21
VEGFA-220ENST00000519767 AKAP17AQ02040 695 aaKnown RBP28.86■■■□□ 2.21
VEGFA-220ENST00000519767 MARCH8Q5T0T0 291 aa28.86■■■□□ 2.21
VEGFA-220ENST00000519767 RUFY4Q6ZNE9 571 aa28.86■■■□□ 2.21
VEGFA-220ENST00000519767 PCYT2Q99447 389 aa28.86■■■□□ 2.21
VEGFA-220ENST00000519767 IFIH1Q9BYX4 1025 aaKnown RBP28.86■■■□□ 2.21
VEGFA-220ENST00000519767 LPXNO60711 386 aa28.85■■■□□ 2.21
VEGFA-220ENST00000519767 CYP3A4P08684 503 aa28.85■■■□□ 2.21
VEGFA-220ENST00000519767 INSRRP14616 1297 aa28.85■■■□□ 2.21
VEGFA-220ENST00000519767 GNA11P29992 359 aa28.85■■■□□ 2.21
VEGFA-220ENST00000519767 SLC26A2P50443 739 aa28.85■■■□□ 2.21
VEGFA-220ENST00000519767 STAT5BP51692 787 aa28.85■■■□□ 2.21
VEGFA-220ENST00000519767 EVCP57679 992 aa28.85■■■□□ 2.21
VEGFA-220ENST00000519767 SKIV2LQ15477 1246 aaKnown RBP28.85■■■□□ 2.21
VEGFA-220ENST00000519767 JAKMIP3Q5VZ66 844 aa28.85■■■□□ 2.21
VEGFA-220ENST00000519767 IL27Q8NEV9 243 aa28.85■■■□□ 2.21
VEGFA-220ENST00000519767 BDP1A6H8Y1 2624 aa28.85■■■□□ 2.21
VEGFA-220ENST00000519767 DOCK5Q9H7D0 1870 aa28.85■■■□□ 2.21
VEGFA-220ENST00000519767 ATG7O95352 703 aa28.84■■■□□ 2.21
VEGFA-220ENST00000519767 ITGB3BPQ13352 177 aaPredicted RBP28.84■■■□□ 2.21
VEGFA-220ENST00000519767 SP7Q8TDD2 431 aaPredicted RBP28.84■■■□□ 2.21
VEGFA-220ENST00000519767 OSBPL7Q9BZF2 842 aa28.84■■■□□ 2.21
VEGFA-220ENST00000519767 COG5Q9UP83 839 aa28.84■■■□□ 2.21
VEGFA-220ENST00000519767 NID2Q14112 1375 aa28.84■■■□□ 2.21
VEGFA-220ENST00000519767 PKN1Q16512 942 aa28.83■■■□□ 2.21
VEGFA-220ENST00000519767 IER5Q5VY09 327 aa28.83■■■□□ 2.21
VEGFA-220ENST00000519767 BICD2Q8TD16 824 aa28.83■■■□□ 2.21
VEGFA-220ENST00000519767 DNAJB3Q8WWF6 145 aa28.83■■■□□ 2.21
VEGFA-220ENST00000519767 SUGCTQ9HAC7 445 aa28.83■■■□□ 2.21
VEGFA-220ENST00000519767 TRPC6Q9Y210 931 aa28.83■■■□□ 2.21
VEGFA-220ENST00000519767 KAT6AQ92794 2004 aa28.82■■■□□ 2.2
VEGFA-220ENST00000519767 NCOR1O75376 2440 aa28.82■■■□□ 2.2
VEGFA-220ENST00000519767 IGBP1P78318 339 aa28.82■■■□□ 2.2
VEGFA-220ENST00000519767 SPRED2Q7Z698 418 aa28.82■■■□□ 2.2
VEGFA-220ENST00000519767 PLA2G4DQ86XP0 818 aa28.82■■■□□ 2.2
VEGFA-220ENST00000519767 REXO1Q8N1G1 1221 aaKnown RBP28.82■■■□□ 2.2
VEGFA-220ENST00000519767 CRYGNQ8WXF5 182 aa28.82■■■□□ 2.2
VEGFA-220ENST00000519767 SAMD11Q96NU1 681 aa28.82■■■□□ 2.2
VEGFA-220ENST00000519767 RNF26Q9BY78 433 aaPredicted RBP28.82■■■□□ 2.2
VEGFA-220ENST00000519767 REV3LO60673 3130 aa28.82■■■□□ 2.2
VEGFA-220ENST00000519767 SPTBN5Q9NRC6 3674 aaKnown RBP28.82■■■□□ 2.2
VEGFA-220ENST00000519767 LOC101059915A0A1B0GWI6 518 aaPredicted RBP28.81■■■□□ 2.2
VEGFA-220ENST00000519767 FAM86B1E9PN63 330 aa28.81■■■□□ 2.2
VEGFA-220ENST00000519767 NEFLP07196 543 aa28.81■■■□□ 2.2
VEGFA-220ENST00000519767 FAM86B2P0C5J1 330 aa28.81■■■□□ 2.2
VEGFA-220ENST00000519767 IFNAR1P17181 557 aa28.81■■■□□ 2.2
VEGFA-220ENST00000519767 MGAT3Q09327 533 aa28.81■■■□□ 2.2
VEGFA-220ENST00000519767 PLCB4Q15147 1175 aa28.81■■■□□ 2.2
VEGFA-220ENST00000519767 KRT40Q6A162 431 aa28.81■■■□□ 2.2
VEGFA-220ENST00000519767 RUFY3Q7L099 469 aa28.81■■■□□ 2.2
VEGFA-220ENST00000519767 YME1L1Q96TA2 773 aa28.81■■■□□ 2.2
VEGFA-220ENST00000519767 ZSWIM6Q9HCJ5 1215 aa28.81■■■□□ 2.2
VEGFA-220ENST00000519767 MTUS1Q9ULD2 1270 aa28.81■■■□□ 2.2
VEGFA-220ENST00000519767 PCDHA2Q9Y5H9 948 aa28.81■■■□□ 2.2
VEGFA-220ENST00000519767 SQORQ9Y6N5 450 aa28.81■■■□□ 2.2
VEGFA-220ENST00000519767 IGKV6D-21A0A0A0MT36 114 aa28.8■■■□□ 2.2
VEGFA-220ENST00000519767 POTEB3A0JP26 581 aa28.8■■■□□ 2.2
VEGFA-220ENST00000519767 UPP2O95045 317 aa28.8■■■□□ 2.2
VEGFA-220ENST00000519767 GHRP10912 638 aa28.8■■■□□ 2.2
VEGFA-220ENST00000519767 PDIA3P30101 505 aaKnown RBP28.8■■■□□ 2.2
VEGFA-220ENST00000519767 LPIN1Q14693 890 aa28.8■■■□□ 2.2
VEGFA-220ENST00000519767 NTRK3Q16288 839 aa28.8■■■□□ 2.2
VEGFA-220ENST00000519767 FAM160B1Q5W0V3 765 aa28.8■■■□□ 2.2
VEGFA-220ENST00000519767 POTEBQ6S5H4 581 aa28.8■■■□□ 2.2
VEGFA-220ENST00000519767 NME8Q8N427 588 aa28.8■■■□□ 2.2
VEGFA-220ENST00000519767 PHKBQ93100 1093 aa28.8■■■□□ 2.2
VEGFA-220ENST00000519767 TBC1D22BQ9NU19 505 aa28.8■■■□□ 2.2
VEGFA-220ENST00000519767 IPO5O00410 1097 aaKnown RBP28.79■■■□□ 2.2
VEGFA-220ENST00000519767 MRPS6P82932 125 aaKnown RBP28.79■■■□□ 2.2
VEGFA-220ENST00000519767 FBXO47Q5MNV8 452 aa28.79■■■□□ 2.2
VEGFA-220ENST00000519767 ABHD15Q6UXT9 468 aa28.79■■■□□ 2.2
VEGFA-220ENST00000519767 CCDC148Q8NFR7 591 aa28.79■■■□□ 2.2
VEGFA-220ENST00000519767 CYP46A1Q9Y6A2 500 aa28.79■■■□□ 2.2
VEGFA-220ENST00000519767 CDY2AQ9Y6F7 541 aa28.79■■■□□ 2.2
VEGFA-220ENST00000519767 PTPRSQ13332 1948 aa28.79■■■□□ 2.2
VEGFA-220ENST00000519767 IGLV3-22A0A075B6J6 115 aa28.78■■■□□ 2.2
VEGFA-220ENST00000519767 M0QZ92 97 aa28.78■■■□□ 2.2
VEGFA-220ENST00000519767 TNFRSF10AO00220 468 aa28.78■■■□□ 2.2
VEGFA-220ENST00000519767 BACH1O14867 736 aa28.78■■■□□ 2.2
VEGFA-220ENST00000519767 DHX15O43143 795 aaKnown RBP28.78■■■□□ 2.2
VEGFA-220ENST00000519767 CCNE2O96020 404 aa28.78■■■□□ 2.2
VEGFA-220ENST00000519767 SETQ01105 290 aaPredicted RBP28.78■■■□□ 2.2
VEGFA-220ENST00000519767 MIS18BP1Q6P0N0 1132 aa28.78■■■□□ 2.2
VEGFA-220ENST00000519767 TSHZ1Q6ZSZ6 1077 aa28.78■■■□□ 2.2
VEGFA-220ENST00000519767 FAM43BQ6ZT52 329 aaPredicted RBP28.78■■■□□ 2.2
VEGFA-220ENST00000519767 FBXO22Q8NEZ5 403 aa28.78■■■□□ 2.2
VEGFA-220ENST00000519767 ADAMTS19Q8TE59 1207 aa28.78■■■□□ 2.2
VEGFA-220ENST00000519767 GDPD5Q8WTR4 605 aa28.78■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms