RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 CSPG5O95196 566 aa14.25□□□□□ -0.13
TRAPPC9-204ENST00000518723 SIGLEC14Q08ET2 396 aa14.25□□□□□ -0.13
TRAPPC9-204ENST00000518723 PPFIA1Q13136 1202 aa14.25□□□□□ -0.13
TRAPPC9-204ENST00000518723 GRM4Q14833 912 aa14.25□□□□□ -0.13
TRAPPC9-204ENST00000518723 PCNX4Q63HM2 1172 aa14.25□□□□□ -0.13
TRAPPC9-204ENST00000518723 CWC27Q6UX04 472 aaKnown RBP14.25□□□□□ -0.13
TRAPPC9-204ENST00000518723 NPAS4Q8IUM7 802 aa14.25□□□□□ -0.13
TRAPPC9-204ENST00000518723 FTHL17Q9BXU8 183 aa14.25□□□□□ -0.13
TRAPPC9-204ENST00000518723 RTEL1Q9NZ71 1219 aa14.25□□□□□ -0.13
TRAPPC9-204ENST00000518723 TUBE1Q9UJT0 475 aa14.25□□□□□ -0.13
TRAPPC9-204ENST00000518723 USP15Q9Y4E8 981 aaPredicted RBP14.25□□□□□ -0.13
TRAPPC9-204ENST00000518723 CDY2AQ9Y6F7 541 aa14.25□□□□□ -0.13
TRAPPC9-204ENST00000518723 HIP1O00291 1037 aa14.24□□□□□ -0.13
TRAPPC9-204ENST00000518723 GLP2RO95838 553 aa14.24□□□□□ -0.13
TRAPPC9-204ENST00000518723 TCF7P36402 384 aaPredicted RBP14.24□□□□□ -0.13
TRAPPC9-204ENST00000518723 GRIK4Q16099 956 aa14.24□□□□□ -0.13
TRAPPC9-204ENST00000518723 MARCH8Q5T0T0 291 aa14.24□□□□□ -0.13
TRAPPC9-204ENST00000518723 CYB5R4Q7L1T6 521 aa14.24□□□□□ -0.13
TRAPPC9-204ENST00000518723 KLHL23Q8NBE8 558 aa14.24□□□□□ -0.13
TRAPPC9-204ENST00000518723 POF1BQ8WVV4 589 aa14.24□□□□□ -0.13
TRAPPC9-204ENST00000518723 DNAJB3Q8WWF6 145 aa14.24□□□□□ -0.13
TRAPPC9-204ENST00000518723 PHF7Q9BWX1 381 aaPredicted RBP14.24□□□□□ -0.13
TRAPPC9-204ENST00000518723 LNPKQ9C0E8 428 aa14.24□□□□□ -0.13
TRAPPC9-204ENST00000518723 IRF2BPLQ9H1B7 796 aa14.24□□□□□ -0.13
TRAPPC9-204ENST00000518723 OSBPL3Q9H4L5 887 aa14.24□□□□□ -0.13
TRAPPC9-204ENST00000518723 AGO3Q9H9G7 860 aaKnown RBP14.24□□□□□ -0.13
TRAPPC9-204ENST00000518723 DIAPH3Q9NSV4 1193 aa14.24□□□□□ -0.13
TRAPPC9-204ENST00000518723 ERAP1Q9NZ08 941 aa14.24□□□□□ -0.13
TRAPPC9-204ENST00000518723 FSD2A1L4K1 749 aa14.23□□□□□ -0.13
TRAPPC9-204ENST00000518723 ATF7P17544 494 aaPredicted RBP14.23□□□□□ -0.13
TRAPPC9-204ENST00000518723 CD52P31358 61 aa14.23□□□□□ -0.13
TRAPPC9-204ENST00000518723 NRIP1P48552 1158 aa14.23□□□□□ -0.13
TRAPPC9-204ENST00000518723 MRPS6P82932 125 aaKnown RBP14.23□□□□□ -0.13
TRAPPC9-204ENST00000518723 SP4Q02446 784 aa14.23□□□□□ -0.13
TRAPPC9-204ENST00000518723 RTN4RL1Q86UN2 441 aaPredicted RBP14.23□□□□□ -0.13
TRAPPC9-204ENST00000518723 NLRX1Q86UT6 975 aa14.23□□□□□ -0.13
TRAPPC9-204ENST00000518723 SUSD6Q92537 303 aa14.23□□□□□ -0.13
TRAPPC9-204ENST00000518723 ASIC4Q96FT7 647 aa14.23□□□□□ -0.13
TRAPPC9-204ENST00000518723 BARX2Q9UMQ3 279 aaPredicted RBP14.23□□□□□ -0.13
TRAPPC9-204ENST00000518723 MYO15AQ9UKN7 3530 aa14.23□□□□□ -0.13
TRAPPC9-204ENST00000518723 SPTBN4Q9H254 2564 aa14.23□□□□□ -0.13
TRAPPC9-204ENST00000518723 PIK3CDO00329 1044 aa14.22□□□□□ -0.13
TRAPPC9-204ENST00000518723 GFRA3O60609 400 aa14.22□□□□□ -0.13
TRAPPC9-204ENST00000518723 STAG3L1P0CL83 205 aa14.22□□□□□ -0.13
TRAPPC9-204ENST00000518723 KCNA2P16389 499 aa14.22□□□□□ -0.13
TRAPPC9-204ENST00000518723 UBE3AQ05086 875 aa14.22□□□□□ -0.13
TRAPPC9-204ENST00000518723 TROAPQ12815 778 aa14.22□□□□□ -0.13
TRAPPC9-204ENST00000518723 IER5Q5VY09 327 aa14.22□□□□□ -0.13
TRAPPC9-204ENST00000518723 FAM43BQ6ZT52 329 aaPredicted RBP14.22□□□□□ -0.13
TRAPPC9-204ENST00000518723 ATP8B4Q8TF62 1192 aa14.22□□□□□ -0.13
TRAPPC9-204ENST00000518723 SEPT1Q8WYJ6 367 aa14.22□□□□□ -0.13
TRAPPC9-204ENST00000518723 GPRASP2Q96D09 838 aa14.22□□□□□ -0.13
TRAPPC9-204ENST00000518723 CDHR1Q96JP9 859 aa14.22□□□□□ -0.13
TRAPPC9-204ENST00000518723 GSTTP1A0A1W2PQM5 241 aa14.21□□□□□ -0.13
TRAPPC9-204ENST00000518723 RRN3P2A6NIE6 340 aa14.21□□□□□ -0.13
TRAPPC9-204ENST00000518723 ATP9AO75110 1047 aa14.21□□□□□ -0.13
TRAPPC9-204ENST00000518723 SCG2P13521 617 aa14.21□□□□□ -0.13
TRAPPC9-204ENST00000518723 MARK3P27448 753 aa14.21□□□□□ -0.13
TRAPPC9-204ENST00000518723 NUBP1P53384 320 aa14.21□□□□□ -0.13
TRAPPC9-204ENST00000518723 VCPP55072 806 aaKnown RBP14.21□□□□□ -0.13
TRAPPC9-204ENST00000518723 PAN2Q504Q3 1202 aaKnown RBP14.21□□□□□ -0.13
TRAPPC9-204ENST00000518723 RBM23Q86U06 439 aaKnown RBP14.21□□□□□ -0.13
TRAPPC9-204ENST00000518723 PLEKHM2Q8IWE5 1019 aa14.21□□□□□ -0.13
TRAPPC9-204ENST00000518723 SMARCC2Q8TAQ2 1214 aa14.21□□□□□ -0.13
TRAPPC9-204ENST00000518723 CDCA3Q99618 268 aaPredicted RBP14.21□□□□□ -0.13
TRAPPC9-204ENST00000518723 SMARCAD1Q9H4L7 1026 aa14.21□□□□□ -0.13
TRAPPC9-204ENST00000518723 TLE6Q9H808 572 aa14.21□□□□□ -0.13
TRAPPC9-204ENST00000518723 PTPRZ1P23471 2315 aaPredicted RBP14.21□□□□□ -0.13
TRAPPC9-204ENST00000518723 KMT2EQ8IZD2 1858 aa14.21□□□□□ -0.14
TRAPPC9-204ENST00000518723 IGSF9BQ9UPX0 1349 aa14.2□□□□□ -0.14
TRAPPC9-204ENST00000518723 RIF1Q5UIP0 2472 aaKnown RBP14.2□□□□□ -0.14
TRAPPC9-204ENST00000518723 MEIS2O14770 477 aa14.2□□□□□ -0.14
TRAPPC9-204ENST00000518723 AVPR2P30518 371 aa14.2□□□□□ -0.14
TRAPPC9-204ENST00000518723 FOXK2Q01167 660 aa14.2□□□□□ -0.14
TRAPPC9-204ENST00000518723 TRDNQ13061 729 aa14.2□□□□□ -0.14
TRAPPC9-204ENST00000518723 PTPN21Q16825 1174 aa14.2□□□□□ -0.14
TRAPPC9-204ENST00000518723 USP17L6PQ6QN14 398 aa14.2□□□□□ -0.14
TRAPPC9-204ENST00000518723 SMC5Q8IY18 1101 aa14.2□□□□□ -0.14
TRAPPC9-204ENST00000518723 GLG1Q92896 1179 aa14.2□□□□□ -0.14
TRAPPC9-204ENST00000518723 CUL5Q93034 780 aa14.2□□□□□ -0.14
TRAPPC9-204ENST00000518723 RPGRIP1Q96KN7 1286 aa14.2□□□□□ -0.14
TRAPPC9-204ENST00000518723 PADI3Q9ULW8 664 aa14.2□□□□□ -0.14
TRAPPC9-204ENST00000518723 PCDHGC5Q9Y5F6 944 aa14.2□□□□□ -0.14
TRAPPC9-204ENST00000518723 TRPV2Q9Y5S1 764 aa14.2□□□□□ -0.14
TRAPPC9-204ENST00000518723 BAZ2BQ9UIF8 2168 aaKnown RBP14.2□□□□□ -0.14
TRAPPC9-204ENST00000518723 KDM3AQ9Y4C1 1321 aa14.19□□□□□ -0.14
TRAPPC9-204ENST00000518723 DOCK5Q9H7D0 1870 aa14.19□□□□□ -0.14
TRAPPC9-204ENST00000518723 ERICH2A1L162 156 aa14.19□□□□□ -0.14
TRAPPC9-204ENST00000518723 PROB1E7EW31 1015 aa14.19□□□□□ -0.14
TRAPPC9-204ENST00000518723 M0QZ92 97 aa14.19□□□□□ -0.14
TRAPPC9-204ENST00000518723 IFIT3O14879 490 aaKnown RBP14.19□□□□□ -0.14
TRAPPC9-204ENST00000518723 INSRRP14616 1297 aa14.19□□□□□ -0.14
TRAPPC9-204ENST00000518723 ITGB5P18084 799 aa14.19□□□□□ -0.14
TRAPPC9-204ENST00000518723 PAK2Q13177 524 aa14.19□□□□□ -0.14
TRAPPC9-204ENST00000518723 PDE12Q6L8Q7 609 aaKnown RBP14.19□□□□□ -0.14
TRAPPC9-204ENST00000518723 VN1R2Q8NFZ6 395 aa14.19□□□□□ -0.14
TRAPPC9-204ENST00000518723 TNPO1Q92973 898 aaKnown RBP14.19□□□□□ -0.14
TRAPPC9-204ENST00000518723 NEK1Q96PY6 1258 aa14.19□□□□□ -0.14
TRAPPC9-204ENST00000518723 SPZ1Q9BXG8 430 aa14.19□□□□□ -0.14
TRAPPC9-204ENST00000518723 FAM49AQ9H0Q0 323 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms