RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 RNF34Q969K3 372 aa7.77□□□□□ -1.17
CCDC6-203ENST00000518638 MXD3Q9BW11 206 aa7.77□□□□□ -1.17
CCDC6-203ENST00000518638 PICK1Q9NRD5 415 aa7.77□□□□□ -1.17
CCDC6-203ENST00000518638 MTMR10Q9NXD2 777 aa7.77□□□□□ -1.17
CCDC6-203ENST00000518638 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.77□□□□□ -1.17
CCDC6-203ENST00000518638 VAV3Q9UKW4 847 aa7.77□□□□□ -1.17
CCDC6-203ENST00000518638 PCOLCE2Q9UKZ9 415 aa7.77□□□□□ -1.17
CCDC6-203ENST00000518638 TACC3Q9Y6A5 838 aa7.77□□□□□ -1.17
CCDC6-203ENST00000518638 ADGRA2Q96PE1 1338 aa7.77□□□□□ -1.17
CCDC6-203ENST00000518638 ZSWIM8A7E2V4 1837 aa7.76□□□□□ -1.17
CCDC6-203ENST00000518638 CLRN2A0PK11 232 aa7.76□□□□□ -1.17
CCDC6-203ENST00000518638 DYNC1LI2O43237 492 aaPredicted RBP7.76□□□□□ -1.17
CCDC6-203ENST00000518638 CILPO75339 1184 aa7.76□□□□□ -1.17
CCDC6-203ENST00000518638 SGPL1O95470 568 aa7.76□□□□□ -1.17
CCDC6-203ENST00000518638 F13A1P00488 732 aa7.76□□□□□ -1.17
CCDC6-203ENST00000518638 BUD31P41223 144 aaPredicted RBP7.76□□□□□ -1.17
CCDC6-203ENST00000518638 PSMC4P43686 418 aa7.76□□□□□ -1.17
CCDC6-203ENST00000518638 RBM5P52756 815 aaKnown RBP eCLIP7.76□□□□□ -1.17
CCDC6-203ENST00000518638 RIPK4P57078 832 aa7.76□□□□□ -1.17
CCDC6-203ENST00000518638 FAM160A1Q05DH4 1040 aa7.76□□□□□ -1.17
CCDC6-203ENST00000518638 SNAP47Q5SQN1 464 aa7.76□□□□□ -1.17
CCDC6-203ENST00000518638 ZNF804AQ7Z570 1209 aa7.76□□□□□ -1.17
CCDC6-203ENST00000518638 ZSWIM9Q86XI8 627 aa7.76□□□□□ -1.17
CCDC6-203ENST00000518638 TDHQ8IZJ6 230 aa7.76□□□□□ -1.17
CCDC6-203ENST00000518638 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.76□□□□□ -1.17
CCDC6-203ENST00000518638 GDF15Q99988 308 aa7.76□□□□□ -1.17
CCDC6-203ENST00000518638 STAP2Q9UGK3 403 aa7.76□□□□□ -1.17
CCDC6-203ENST00000518638 PRAMEF27A3QJZ7 478 aa7.75□□□□□ -1.17
CCDC6-203ENST00000518638 EIF4A3P38919 411 aaKnown RBP7.75□□□□□ -1.17
CCDC6-203ENST00000518638 PRKCQQ04759 706 aa7.75□□□□□ -1.17
CCDC6-203ENST00000518638 PPIL2Q13356 520 aa7.75□□□□□ -1.17
CCDC6-203ENST00000518638 MLANAQ16655 118 aa7.75□□□□□ -1.17
CCDC6-203ENST00000518638 C17orf99Q6UX52 265 aa7.75□□□□□ -1.17
CCDC6-203ENST00000518638 C15orf52Q6ZUT6 534 aaKnown RBP7.75□□□□□ -1.17
CCDC6-203ENST00000518638 NECAB2Q7Z6G3 386 aa7.75□□□□□ -1.17
CCDC6-203ENST00000518638 GOLM1Q8NBJ4 401 aa7.75□□□□□ -1.17
CCDC6-203ENST00000518638 MPHOSPH8Q99549 860 aa7.75□□□□□ -1.17
CCDC6-203ENST00000518638 MYD88Q99836 296 aa7.75□□□□□ -1.17
CCDC6-203ENST00000518638 ARHGAP39Q9C0H5 1083 aa7.75□□□□□ -1.17
CCDC6-203ENST00000518638 CD209Q9NNX6 404 aa7.75□□□□□ -1.17
CCDC6-203ENST00000518638 RAPGEFL1Q9UHV5 662 aa7.75□□□□□ -1.17
CCDC6-203ENST00000518638 COL6A3P12111 3177 aa7.75□□□□□ -1.17
CCDC6-203ENST00000518638 RPTORQ8N122 1335 aa7.75□□□□□ -1.17
CCDC6-203ENST00000518638 MGAMO43451 1857 aa7.75□□□□□ -1.17
CCDC6-203ENST00000518638 BTBD19C9JJ37 291 aa7.74□□□□□ -1.17
CCDC6-203ENST00000518638 CHL1O00533 1208 aa7.74□□□□□ -1.17
CCDC6-203ENST00000518638 TFRCP02786 760 aaKnown RBP7.74□□□□□ -1.17
CCDC6-203ENST00000518638 ZSCAN22P10073 491 aaPredicted RBP7.74□□□□□ -1.17
CCDC6-203ENST00000518638 FAM109BQ6ICB4 259 aaPredicted RBP7.74□□□□□ -1.17
CCDC6-203ENST00000518638 FBXL19Q6PCT2 694 aa7.74□□□□□ -1.17
CCDC6-203ENST00000518638 ANKRD23Q86SG2 305 aa7.74□□□□□ -1.17
CCDC6-203ENST00000518638 METTL16Q86W50 562 aaKnown RBP7.74□□□□□ -1.17
CCDC6-203ENST00000518638 FAM181AQ8N9Y4 354 aa7.74□□□□□ -1.17
CCDC6-203ENST00000518638 KCT2Q8NC54 265 aa7.74□□□□□ -1.17
CCDC6-203ENST00000518638 TTLL11Q8NHH1 800 aa7.74□□□□□ -1.17
CCDC6-203ENST00000518638 PRMT6Q96LA8 375 aaPredicted RBP7.74□□□□□ -1.17
CCDC6-203ENST00000518638 PARK7Q99497 189 aaKnown RBP7.74□□□□□ -1.17
CCDC6-203ENST00000518638 WNT10AQ9GZT5 417 aa7.74□□□□□ -1.17
CCDC6-203ENST00000518638 SSU72Q9NP77 194 aaKnown RBP7.74□□□□□ -1.17
CCDC6-203ENST00000518638 LMCD1Q9NZU5 365 aa7.74□□□□□ -1.17
CCDC6-203ENST00000518638 ADAMTS1Q9UHI8 967 aa7.74□□□□□ -1.17
CCDC6-203ENST00000518638 SUPT16HQ9Y5B9 1047 aaKnown RBP7.74□□□□□ -1.17
CCDC6-203ENST00000518638 RANBP2P49792 3224 aaKnown RBP7.73□□□□□ -1.17
CCDC6-203ENST00000518638 F8W031 263 aaPredicted RBP7.73□□□□□ -1.17
CCDC6-203ENST00000518638 GREM1O60565 184 aa7.73□□□□□ -1.17
CCDC6-203ENST00000518638 BPNT1O95861 308 aa7.73□□□□□ -1.17
CCDC6-203ENST00000518638 IL1R1P14778 569 aa7.73□□□□□ -1.17
CCDC6-203ENST00000518638 CD96P40200 585 aa7.73□□□□□ -1.17
CCDC6-203ENST00000518638 TMPOP42166 694 aaKnown RBP7.73□□□□□ -1.17
CCDC6-203ENST00000518638 PPATQ06203 517 aa7.73□□□□□ -1.17
CCDC6-203ENST00000518638 NEXNQ0ZGT2 675 aa7.73□□□□□ -1.17
CCDC6-203ENST00000518638 MPP2Q14168 576 aa7.73□□□□□ -1.17
CCDC6-203ENST00000518638 KCNMB1Q16558 191 aa7.73□□□□□ -1.17
CCDC6-203ENST00000518638 DCAF15Q66K64 600 aa7.73□□□□□ -1.17
CCDC6-203ENST00000518638 TTLL10Q6ZVT0 673 aa7.73□□□□□ -1.17
CCDC6-203ENST00000518638 UBE3DQ7Z6J8 389 aa7.73□□□□□ -1.17
CCDC6-203ENST00000518638 ZNF507Q8TCN5 953 aa7.73□□□□□ -1.17
CCDC6-203ENST00000518638 WRNIP1Q96S55 665 aa7.73□□□□□ -1.17
CCDC6-203ENST00000518638 GREM2Q9H772 168 aa7.73□□□□□ -1.17
CCDC6-203ENST00000518638 TMOD2Q9NZR1 351 aa7.73□□□□□ -1.17
CCDC6-203ENST00000518638 RPAP1Q9BWH6 1393 aaPredicted RBP7.72□□□□□ -1.17
CCDC6-203ENST00000518638 ALPK3Q96L96 1907 aa7.72□□□□□ -1.17
CCDC6-203ENST00000518638 ADCY3O60266 1144 aa7.72□□□□□ -1.17
CCDC6-203ENST00000518638 HMGB1P09429 215 aaKnown RBP7.72□□□□□ -1.17
CCDC6-203ENST00000518638 ETF1P62495 437 aaKnown RBP7.72□□□□□ -1.17
CCDC6-203ENST00000518638 HDLBPQ00341 1268 aaKnown RBP7.72□□□□□ -1.17
CCDC6-203ENST00000518638 PRKCZQ05513 592 aa7.72□□□□□ -1.17
CCDC6-203ENST00000518638 IFI16Q16666 785 aaKnown RBP7.72□□□□□ -1.17
CCDC6-203ENST00000518638 ZNF394Q53GI3 561 aa7.72□□□□□ -1.17
CCDC6-203ENST00000518638 SLC23A3Q6PIS1 610 aa7.72□□□□□ -1.17
CCDC6-203ENST00000518638 Q7L0L9 218 aa7.72□□□□□ -1.17
CCDC6-203ENST00000518638 CERS5Q8N5B7 392 aa7.72□□□□□ -1.17
CCDC6-203ENST00000518638 LRRC3Q9BY71 257 aa7.72□□□□□ -1.17
CCDC6-203ENST00000518638 ZNF70Q9UC06 446 aaPredicted RBP7.72□□□□□ -1.17
CCDC6-203ENST00000518638 CPA4Q9UI42 421 aa7.72□□□□□ -1.17
CCDC6-203ENST00000518638 LAMA3Q16787 3333 aa7.71□□□□□ -1.17
CCDC6-203ENST00000518638 ZNF503-AS2A6NEH8 195 aa7.71□□□□□ -1.18
CCDC6-203ENST00000518638 PDHXO00330 501 aa7.71□□□□□ -1.18
CCDC6-203ENST00000518638 CHRNDQ07001 517 aa7.71□□□□□ -1.18
CCDC6-203ENST00000518638 KRT24Q2M2I5 525 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms