RNA–Protein interactions for RNA: ENST00000517766.5

CD47-205, Transcript of CD47 molecule, humanhuman

TSL 2

Gene CD47, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-205ENST00000517766 KRBA2Q6ZNG9 492 aa6.64□□□□□ -1.35
CD47-205ENST00000517766 PIK3AP1Q6ZUJ8 805 aa6.64□□□□□ -1.35
CD47-205ENST00000517766 TMEM179Q6ZVK1 233 aa6.64□□□□□ -1.35
CD47-205ENST00000517766 HEATR3Q7Z4Q2 680 aa6.64□□□□□ -1.35
CD47-205ENST00000517766 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.64□□□□□ -1.35
CD47-205ENST00000517766 ZSCAN30Q86W11 494 aa6.64□□□□□ -1.35
CD47-205ENST00000517766 METTL16Q86W50 562 aaKnown RBP6.64□□□□□ -1.35
CD47-205ENST00000517766 NIM1KQ8IY84 436 aa6.64□□□□□ -1.35
CD47-205ENST00000517766 AGBL3Q8NEM8 1001 aa6.64□□□□□ -1.35
CD47-205ENST00000517766 DCAF4Q8WV16 495 aa6.64□□□□□ -1.35
CD47-205ENST00000517766 MKL1Q969V6 931 aa6.64□□□□□ -1.35
CD47-205ENST00000517766 ALKBH8Q96BT7 664 aaKnown RBP6.64□□□□□ -1.35
CD47-205ENST00000517766 CLIC6Q96NY7 704 aa6.64□□□□□ -1.35
CD47-205ENST00000517766 CSRNP1Q96S65 589 aa6.64□□□□□ -1.35
CD47-205ENST00000517766 MTFR1LQ9H019 292 aa6.64□□□□□ -1.35
CD47-205ENST00000517766 ZMYND12Q9H0C1 365 aa6.64□□□□□ -1.35
CD47-205ENST00000517766 GLT8D2Q9H1C3 349 aa6.64□□□□□ -1.35
CD47-205ENST00000517766 DNAJC25Q9H1X3 360 aa6.64□□□□□ -1.35
CD47-205ENST00000517766 KANSL2Q9H9L4 492 aa6.64□□□□□ -1.35
CD47-205ENST00000517766 KCNQ5Q9NR82 932 aa6.64□□□□□ -1.35
CD47-205ENST00000517766 NYAP2Q9P242 653 aa6.64□□□□□ -1.35
CD47-205ENST00000517766 CLIP2Q9UDT6 1046 aa6.64□□□□□ -1.35
CD47-205ENST00000517766 HERC5Q9UII4 1024 aaKnown RBP6.64□□□□□ -1.35
CD47-205ENST00000517766 TUBE1Q9UJT0 475 aa6.64□□□□□ -1.35
CD47-205ENST00000517766 SYNPO2Q9UMS6 1093 aa6.64□□□□□ -1.35
CD47-205ENST00000517766 PCDHA6Q9UN73 950 aa6.64□□□□□ -1.35
CD47-205ENST00000517766 PCDHA8Q9Y5H6 950 aa6.64□□□□□ -1.35
CD47-205ENST00000517766 SLC35F4A4IF30 521 aa6.63□□□□□ -1.35
CD47-205ENST00000517766 SMCO2A6NFE2 343 aa6.63□□□□□ -1.35
CD47-205ENST00000517766 DDTLA6NHG4 134 aaPredicted RBP6.63□□□□□ -1.35
CD47-205ENST00000517766 MYH7BA7E2Y1 1941 aa6.63□□□□□ -1.35
CD47-205ENST00000517766 MPHOSPH10O00566 681 aaKnown RBP6.63□□□□□ -1.35
CD47-205ENST00000517766 ATXN7O15265 892 aaPredicted RBP6.63□□□□□ -1.35
CD47-205ENST00000517766 TNFRSF21O75509 655 aa6.63□□□□□ -1.35
CD47-205ENST00000517766 SASH3O75995 380 aa6.63□□□□□ -1.35
CD47-205ENST00000517766 GOLGA8HP0CJ92 632 aa6.63□□□□□ -1.35
CD47-205ENST00000517766 LONP1P36776 959 aaKnown RBP6.63□□□□□ -1.35
CD47-205ENST00000517766 ATP2B2Q01814 1243 aa6.63□□□□□ -1.35
CD47-205ENST00000517766 ZNF543Q08ER8 600 aa6.63□□□□□ -1.35
CD47-205ENST00000517766 TCP10Q12799 353 aa6.63□□□□□ -1.35
CD47-205ENST00000517766 COL19A1Q14993 1142 aa6.63□□□□□ -1.35
CD47-205ENST00000517766 IQCB1Q15051 598 aa6.63□□□□□ -1.35
CD47-205ENST00000517766 DLGAP5Q15398 846 aa6.63□□□□□ -1.35
CD47-205ENST00000517766 ZNF174Q15697 407 aa6.63□□□□□ -1.35
CD47-205ENST00000517766 ENOX2Q16206 610 aaKnown RBP6.63□□□□□ -1.35
CD47-205ENST00000517766 TSNAXIP1Q2TAA8 658 aa6.63□□□□□ -1.35
CD47-205ENST00000517766 EARS2Q5JPH6 523 aaKnown RBP6.63□□□□□ -1.35
CD47-205ENST00000517766 CT47A1Q5JQC4 288 aaPredicted RBP6.63□□□□□ -1.35
CD47-205ENST00000517766 FKBP1CQ5VVH2 108 aa6.63□□□□□ -1.35
CD47-205ENST00000517766 SARM1Q6SZW1 724 aa6.63□□□□□ -1.35
CD47-205ENST00000517766 LUZP1Q86V48 1076 aa6.63□□□□□ -1.35
CD47-205ENST00000517766 CCDC155Q8N6L0 562 aa6.63□□□□□ -1.35
CD47-205ENST00000517766 TRIML1Q8N9V2 468 aa6.63□□□□□ -1.35
CD47-205ENST00000517766 PIBF1Q8WXW3 757 aa6.63□□□□□ -1.35
CD47-205ENST00000517766 CFHR5Q9BXR6 569 aa6.63□□□□□ -1.35
CD47-205ENST00000517766 KRTAP9-8Q9BYQ0 159 aa6.63□□□□□ -1.35
CD47-205ENST00000517766 PDGFDQ9GZP0 370 aaPredicted RBP6.63□□□□□ -1.35
CD47-205ENST00000517766 CSRNP2Q9H175 543 aa6.63□□□□□ -1.35
CD47-205ENST00000517766 NUCKS1Q9H1E3 243 aaKnown RBP6.63□□□□□ -1.35
CD47-205ENST00000517766 TDRD3Q9H7E2 651 aaKnown RBP6.63□□□□□ -1.35
CD47-205ENST00000517766 ELP3Q9H9T3 547 aa6.63□□□□□ -1.35
CD47-205ENST00000517766 HCN2Q9UL51 889 aa6.63□□□□□ -1.35
CD47-205ENST00000517766 ZNRF3Q9ULT6 936 aa6.63□□□□□ -1.35
CD47-205ENST00000517766 DICER1Q9UPY3 1922 aaKnown RBP6.63□□□□□ -1.35
CD47-205ENST00000517766 FNDC3AQ9Y2H6 1198 aaKnown RBP6.63□□□□□ -1.35
CD47-205ENST00000517766 PSMD14O00487 310 aa6.62□□□□□ -1.35
CD47-205ENST00000517766 IKBKBO14920 756 aa6.62□□□□□ -1.35
CD47-205ENST00000517766 POLR2DO15514 142 aaKnown RBP6.62□□□□□ -1.35
CD47-205ENST00000517766 MYO1BO43795 1136 aa6.62□□□□□ -1.35
CD47-205ENST00000517766 SMC2O95347 1197 aa6.62□□□□□ -1.35
CD47-205ENST00000517766 EPB42P16452 691 aa6.62□□□□□ -1.35
CD47-205ENST00000517766 TARSP26639 723 aaKnown RBP6.62□□□□□ -1.35
CD47-205ENST00000517766 CDC25BP30305 580 aa6.62□□□□□ -1.35
CD47-205ENST00000517766 PRPHP41219 470 aa6.62□□□□□ -1.35
CD47-205ENST00000517766 POSTNQ15063 836 aa6.62□□□□□ -1.35
CD47-205ENST00000517766 NONOQ15233 471 aaKnown RBP eCLIP6.62□□□□□ -1.35
CD47-205ENST00000517766 ABCB5Q2M3G0 1257 aa6.62□□□□□ -1.35
CD47-205ENST00000517766 LONRF3Q496Y0 759 aa6.62□□□□□ -1.35
CD47-205ENST00000517766 DALRD3Q5D0E6 543 aaKnown RBP6.62□□□□□ -1.35
CD47-205ENST00000517766 MCTP2Q6DN12 878 aa6.62□□□□□ -1.35
CD47-205ENST00000517766 C11orf57Q6ZUT1 292 aaPredicted RBP6.62□□□□□ -1.35
CD47-205ENST00000517766 RAB44Q7Z6P3 723 aaPredicted RBP6.62□□□□□ -1.35
CD47-205ENST00000517766 FAM83AQ86UY5 434 aa6.62□□□□□ -1.35
CD47-205ENST00000517766 NLRP8Q86W28 1048 aa6.62□□□□□ -1.35
CD47-205ENST00000517766 HOMER1Q86YM7 354 aa6.62□□□□□ -1.35
CD47-205ENST00000517766 ZFPM1Q8IX07 1006 aa6.62□□□□□ -1.35
CD47-205ENST00000517766 LRRC47Q8N1G4 583 aaKnown RBP6.62□□□□□ -1.35
CD47-205ENST00000517766 C1orf127Q8N9H9 656 aa6.62□□□□□ -1.35
CD47-205ENST00000517766 FAM151AQ8WW52 585 aa6.62□□□□□ -1.35
CD47-205ENST00000517766 ABHD17AQ96GS6 310 aa6.62□□□□□ -1.35
CD47-205ENST00000517766 PRMT6Q96LA8 375 aaPredicted RBP6.62□□□□□ -1.35
CD47-205ENST00000517766 PIGSQ96S52 555 aa6.62□□□□□ -1.35
CD47-205ENST00000517766 GMLQ99445 158 aa6.62□□□□□ -1.35
CD47-205ENST00000517766 NAP1L4Q99733 375 aaKnown RBP6.62□□□□□ -1.35
CD47-205ENST00000517766 DNAJC18Q9H819 358 aa6.62□□□□□ -1.35
CD47-205ENST00000517766 VAT1LQ9HCJ6 419 aa6.62□□□□□ -1.35
CD47-205ENST00000517766 ZNF277Q9NRM2 450 aaPredicted RBP6.62□□□□□ -1.35
CD47-205ENST00000517766 CNTN3Q9P232 1028 aa6.62□□□□□ -1.35
CD47-205ENST00000517766 ZNF70Q9UC06 446 aaPredicted RBP6.62□□□□□ -1.35
CD47-205ENST00000517766 KCNH4Q9UQ05 1017 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms