RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 JAK3P52333 1124 aa11.12□□□□□ -0.63
CLN8-202ENST00000517514 HIC1Q14526 733 aa11.12□□□□□ -0.63
CLN8-202ENST00000517514 DGKDQ16760 1214 aa11.12□□□□□ -0.63
CLN8-202ENST00000517514 UTP14CQ5TAP6 766 aaKnown RBP11.12□□□□□ -0.63
CLN8-202ENST00000517514 SWSAP1Q6NVH7 229 aa11.12□□□□□ -0.63
CLN8-202ENST00000517514 CXCL17Q6UXB2 119 aa11.12□□□□□ -0.63
CLN8-202ENST00000517514 UBE2Q1Q7Z7E8 422 aa11.12□□□□□ -0.63
CLN8-202ENST00000517514 KRI1Q8N9T8 703 aaKnown RBP11.12□□□□□ -0.63
CLN8-202ENST00000517514 BANK1Q8NDB2 785 aa11.12□□□□□ -0.63
CLN8-202ENST00000517514 RDM1Q8NG50 284 aa11.12□□□□□ -0.63
CLN8-202ENST00000517514 AFAP1L1Q8TED9 768 aa11.12□□□□□ -0.63
CLN8-202ENST00000517514 DIS3LQ8TF46 1054 aaKnown RBP11.12□□□□□ -0.63
CLN8-202ENST00000517514 FERMT2Q96AC1 680 aa11.12□□□□□ -0.63
CLN8-202ENST00000517514 ABHD8Q96I13 439 aa11.12□□□□□ -0.63
CLN8-202ENST00000517514 SPATA32Q96LK8 384 aa11.12□□□□□ -0.63
CLN8-202ENST00000517514 LRWD1Q9UFC0 647 aa11.12□□□□□ -0.63
CLN8-202ENST00000517514 TMEM150BA6NC51 233 aa11.11□□□□□ -0.63
CLN8-202ENST00000517514 MARCH6O60337 910 aa11.11□□□□□ -0.63
CLN8-202ENST00000517514 CUTAO60888 179 aa11.11□□□□□ -0.63
CLN8-202ENST00000517514 GADD45BO75293 160 aaPredicted RBP11.11□□□□□ -0.63
CLN8-202ENST00000517514 PSAPP07602 524 aa11.11□□□□□ -0.63
CLN8-202ENST00000517514 MYL3P08590 195 aa11.11□□□□□ -0.63
CLN8-202ENST00000517514 COL6A1P12109 1028 aa11.11□□□□□ -0.63
CLN8-202ENST00000517514 NCLP19338 710 aaKnown RBP11.11□□□□□ -0.63
CLN8-202ENST00000517514 LONP1P36776 959 aaKnown RBP11.11□□□□□ -0.63
CLN8-202ENST00000517514 ACLYP53396 1101 aa11.11□□□□□ -0.63
CLN8-202ENST00000517514 GRB10Q13322 594 aa11.11□□□□□ -0.63
CLN8-202ENST00000517514 CTTNQ14247 550 aaKnown RBP11.11□□□□□ -0.63
CLN8-202ENST00000517514 HYIQ5T013 277 aa11.11□□□□□ -0.63
CLN8-202ENST00000517514 MIS18BP1Q6P0N0 1132 aa11.11□□□□□ -0.63
CLN8-202ENST00000517514 KCNK18Q7Z418 384 aa11.11□□□□□ -0.63
CLN8-202ENST00000517514 CATSPER3Q86XQ3 398 aa11.11□□□□□ -0.63
CLN8-202ENST00000517514 ZNF579Q8NAF0 562 aaKnown RBP11.11□□□□□ -0.63
CLN8-202ENST00000517514 TMEM87AQ8NBN3 555 aa11.11□□□□□ -0.63
CLN8-202ENST00000517514 KCNG4Q8TDN1 519 aa11.11□□□□□ -0.63
CLN8-202ENST00000517514 SYMPKQ92797 1274 aaKnown RBP11.11□□□□□ -0.63
CLN8-202ENST00000517514 CEP89Q96ST8 783 aa11.11□□□□□ -0.63
CLN8-202ENST00000517514 TSEN34Q9BSV6 310 aaKnown RBP11.11□□□□□ -0.63
CLN8-202ENST00000517514 POLR3CQ9BUI4 534 aaPredicted RBP11.11□□□□□ -0.63
CLN8-202ENST00000517514 SCAND2PQ9GZW5 306 aaPredicted RBP11.11□□□□□ -0.63
CLN8-202ENST00000517514 RNPEPQ9H4A4 650 aa11.11□□□□□ -0.63
CLN8-202ENST00000517514 GABBR1Q9UBS5 961 aa11.11□□□□□ -0.63
CLN8-202ENST00000517514 PHF24Q9UPV7 400 aa11.11□□□□□ -0.63
CLN8-202ENST00000517514 LOXHD1Q8IVV2 1947 aa11.11□□□□□ -0.63
CLN8-202ENST00000517514 KAT6AQ92794 2004 aa11.11□□□□□ -0.63
CLN8-202ENST00000517514 EVPLQ92817 2033 aa11.1□□□□□ -0.63
CLN8-202ENST00000517514 FAM237AA0A1B0GTK4 181 aa11.1□□□□□ -0.63
CLN8-202ENST00000517514 A0A1W2PQ45 241 aaPredicted RBP11.1□□□□□ -0.63
CLN8-202ENST00000517514 A0A1W2PQY0 241 aa11.1□□□□□ -0.63
CLN8-202ENST00000517514 POTEB3A0JP26 581 aa11.1□□□□□ -0.63
CLN8-202ENST00000517514 ZBTB42B2RXF5 422 aa11.1□□□□□ -0.63
CLN8-202ENST00000517514 DNM1LO00429 736 aa11.1□□□□□ -0.63
CLN8-202ENST00000517514 NOP56O00567 594 aaKnown RBP11.1□□□□□ -0.63
CLN8-202ENST00000517514 LYPLA2O95372 231 aa11.1□□□□□ -0.63
CLN8-202ENST00000517514 TFRCP02786 760 aaKnown RBP11.1□□□□□ -0.63
CLN8-202ENST00000517514 P4HBP07237 508 aaKnown RBP11.1□□□□□ -0.63
CLN8-202ENST00000517514 RPA1P27694 616 aa11.1□□□□□ -0.63
CLN8-202ENST00000517514 PSEN2P49810 448 aa11.1□□□□□ -0.63
CLN8-202ENST00000517514 STAT5BP51692 787 aa11.1□□□□□ -0.63
CLN8-202ENST00000517514 PSMC6P62333 389 aa11.1□□□□□ -0.63
CLN8-202ENST00000517514 CYP4A11Q02928 519 aa11.1□□□□□ -0.63
CLN8-202ENST00000517514 PLCB4Q15147 1175 aa11.1□□□□□ -0.63
CLN8-202ENST00000517514 TMEM266Q2M3C6 531 aa11.1□□□□□ -0.63
CLN8-202ENST00000517514 TMEM119Q4V9L6 283 aa11.1□□□□□ -0.63
CLN8-202ENST00000517514 RESP18Q5W5W9 173 aa11.1□□□□□ -0.63
CLN8-202ENST00000517514 ADALQ6DHV7 355 aa11.1□□□□□ -0.63
CLN8-202ENST00000517514 POTEBQ6S5H4 581 aa11.1□□□□□ -0.63
CLN8-202ENST00000517514 PLPPR4Q7Z2D5 763 aa11.1□□□□□ -0.63
CLN8-202ENST00000517514 RNF180Q86T96 592 aa11.1□□□□□ -0.63
CLN8-202ENST00000517514 SLC43A3Q8NBI5 491 aa11.1□□□□□ -0.63
CLN8-202ENST00000517514 ARRDC4Q8NCT1 418 aa11.1□□□□□ -0.63
CLN8-202ENST00000517514 AK8Q96MA6 479 aa11.1□□□□□ -0.63
CLN8-202ENST00000517514 LXNQ9BS40 222 aa11.1□□□□□ -0.63
CLN8-202ENST00000517514 MTG1Q9BT17 334 aaPredicted RBP11.1□□□□□ -0.63
CLN8-202ENST00000517514 CCSER1Q9C0I3 900 aa11.1□□□□□ -0.63
CLN8-202ENST00000517514 GOLPH3LQ9H4A5 285 aa11.1□□□□□ -0.63
CLN8-202ENST00000517514 SPC25Q9HBM1 224 aa11.1□□□□□ -0.63
CLN8-202ENST00000517514 TUFT1Q9NNX1 390 aa11.1□□□□□ -0.63
CLN8-202ENST00000517514 ZNF302Q9NR11 478 aa11.1□□□□□ -0.63
CLN8-202ENST00000517514 SAMM50Q9Y512 469 aa11.1□□□□□ -0.63
CLN8-202ENST00000517514 MOXD2PA6NHM9 499 aa11.09□□□□□ -0.63
CLN8-202ENST00000517514 H3BRB1 525 aa11.09□□□□□ -0.63
CLN8-202ENST00000517514 RBAK-RBAKDNI3L0D1 243 aa11.09□□□□□ -0.63
CLN8-202ENST00000517514 KPNA6O60684 536 aa11.09□□□□□ -0.63
CLN8-202ENST00000517514 MYCNP04198 464 aaPredicted RBP11.09□□□□□ -0.63
CLN8-202ENST00000517514 MARK3P27448 753 aa11.09□□□□□ -0.63
CLN8-202ENST00000517514 HOXC8P31273 242 aa11.09□□□□□ -0.63
CLN8-202ENST00000517514 CCT6AP40227 531 aaKnown RBP11.09□□□□□ -0.63
CLN8-202ENST00000517514 QARSP47897 775 aaKnown RBP11.09□□□□□ -0.63
CLN8-202ENST00000517514 ME1P48163 572 aa11.09□□□□□ -0.63
CLN8-202ENST00000517514 PSMC5P62195 406 aa11.09□□□□□ -0.63
CLN8-202ENST00000517514 PRKCEQ02156 737 aa11.09□□□□□ -0.63
CLN8-202ENST00000517514 MFSD10Q14728 455 aa11.09□□□□□ -0.63
CLN8-202ENST00000517514 KARSQ15046 597 aaKnown RBP11.09□□□□□ -0.63
CLN8-202ENST00000517514 NBPF20Q3BBV1 942 aa11.09□□□□□ -0.63
CLN8-202ENST00000517514 NAALADL2Q58DX5 795 aa11.09□□□□□ -0.63
CLN8-202ENST00000517514 PDXDC2PQ6P474 469 aa11.09□□□□□ -0.63
CLN8-202ENST00000517514 POTEGQ6S5H5 508 aa11.09□□□□□ -0.63
CLN8-202ENST00000517514 ANO5Q75V66 913 aa11.09□□□□□ -0.63
CLN8-202ENST00000517514 CABP7Q86V35 215 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms