RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 CD52P31358 61 aa17.48■□□□□ 0.39
CSGALNACT1-204ENST00000517494 LTBRP36941 435 aa17.48■□□□□ 0.39
CSGALNACT1-204ENST00000517494 MRPS6P82932 125 aaKnown RBP17.48■□□□□ 0.39
CSGALNACT1-204ENST00000517494 TMEM62Q0P6H9 643 aa17.48■□□□□ 0.39
CSGALNACT1-204ENST00000517494 COL19A1Q14993 1142 aa17.48■□□□□ 0.39
CSGALNACT1-204ENST00000517494 PAN2Q504Q3 1202 aaKnown RBP17.48■□□□□ 0.39
CSGALNACT1-204ENST00000517494 FBXO47Q5MNV8 452 aa17.48■□□□□ 0.39
CSGALNACT1-204ENST00000517494 TSHZ1Q6ZSZ6 1077 aa17.48■□□□□ 0.39
CSGALNACT1-204ENST00000517494 SMARCAD1Q9H4L7 1026 aa17.48■□□□□ 0.39
CSGALNACT1-204ENST00000517494 TRPC6Q9Y210 931 aa17.48■□□□□ 0.39
CSGALNACT1-204ENST00000517494 MUC6Q6W4X9 2439 aa17.47■□□□□ 0.39
CSGALNACT1-204ENST00000517494 SPDYE3A6NKU9 549 aa17.47■□□□□ 0.39
CSGALNACT1-204ENST00000517494 M0QZ92 97 aa17.47■□□□□ 0.39
CSGALNACT1-204ENST00000517494 LINC01565O15544 149 aa17.47■□□□□ 0.39
CSGALNACT1-204ENST00000517494 PRC1O43663 620 aa17.47■□□□□ 0.39
CSGALNACT1-204ENST00000517494 LINC00271P0C7V0 271 aa17.47■□□□□ 0.39
CSGALNACT1-204ENST00000517494 IRS1P35568 1242 aa17.47■□□□□ 0.39
CSGALNACT1-204ENST00000517494 NDUFV1P49821 464 aa17.47■□□□□ 0.39
CSGALNACT1-204ENST00000517494 GNAQP50148 359 aa17.47■□□□□ 0.39
CSGALNACT1-204ENST00000517494 CCDC82Q8N4S0 544 aa17.47■□□□□ 0.39
CSGALNACT1-204ENST00000517494 LZTS2Q9BRK4 669 aa17.47■□□□□ 0.39
CSGALNACT1-204ENST00000517494 UPF3BQ9BZI7 483 aaKnown RBP17.47■□□□□ 0.39
CSGALNACT1-204ENST00000517494 AGO3Q9H9G7 860 aaKnown RBP17.47■□□□□ 0.39
CSGALNACT1-204ENST00000517494 RC3H2Q9HBD1 1191 aaKnown RBP17.47■□□□□ 0.39
CSGALNACT1-204ENST00000517494 MUTYHQ9UIF7 546 aa17.47■□□□□ 0.39
CSGALNACT1-204ENST00000517494 RBM8AQ9Y5S9 174 aaKnown RBP17.47■□□□□ 0.39
CSGALNACT1-204ENST00000517494 POTEB3A0JP26 581 aa17.46■□□□□ 0.39
CSGALNACT1-204ENST00000517494 SGSM2O43147 1006 aa17.46■□□□□ 0.39
CSGALNACT1-204ENST00000517494 MBTPS2O43462 519 aa17.46■□□□□ 0.39
CSGALNACT1-204ENST00000517494 TBX10O75333 385 aa17.46■□□□□ 0.39
CSGALNACT1-204ENST00000517494 MMP1P03956 469 aa17.46■□□□□ 0.39
CSGALNACT1-204ENST00000517494 SMAD2Q15796 467 aaKnown RBP17.46■□□□□ 0.39
CSGALNACT1-204ENST00000517494 MARCH8Q5T0T0 291 aa17.46■□□□□ 0.39
CSGALNACT1-204ENST00000517494 POTEBQ6S5H4 581 aa17.46■□□□□ 0.39
CSGALNACT1-204ENST00000517494 HEATR3Q7Z4Q2 680 aa17.46■□□□□ 0.39
CSGALNACT1-204ENST00000517494 SRBD1Q8N5C6 995 aaKnown RBP17.46■□□□□ 0.39
CSGALNACT1-204ENST00000517494 CLP1Q92989 425 aaKnown RBP17.46■□□□□ 0.39
CSGALNACT1-204ENST00000517494 MAP3K14Q99558 947 aa17.46■□□□□ 0.39
CSGALNACT1-204ENST00000517494 POP1Q99575 1024 aaKnown RBP17.46■□□□□ 0.39
CSGALNACT1-204ENST00000517494 AZI2Q9H6S1 392 aa17.46■□□□□ 0.39
CSGALNACT1-204ENST00000517494 JPH1Q9HDC5 661 aaPredicted RBP17.46■□□□□ 0.39
CSGALNACT1-204ENST00000517494 CD207Q9UJ71 328 aa17.46■□□□□ 0.39
CSGALNACT1-204ENST00000517494 MRPL42Q9Y6G3 142 aaKnown RBP17.46■□□□□ 0.39
CSGALNACT1-204ENST00000517494 NLRC5Q86WI3 1866 aa17.46■□□□□ 0.38
CSGALNACT1-204ENST00000517494 MBLAC1A4D2B0 266 aaPredicted RBP17.45■□□□□ 0.38
CSGALNACT1-204ENST00000517494 C19orf67A6NJJ6 358 aa17.45■□□□□ 0.38
CSGALNACT1-204ENST00000517494 DGKIO75912 1065 aa17.45■□□□□ 0.38
CSGALNACT1-204ENST00000517494 INSRRP14616 1297 aa17.45■□□□□ 0.38
CSGALNACT1-204ENST00000517494 SMAD4Q13485 552 aaKnown RBP17.45■□□□□ 0.38
CSGALNACT1-204ENST00000517494 CTC1Q2NKJ3 1217 aa17.45■□□□□ 0.38
CSGALNACT1-204ENST00000517494 IER5Q5VY09 327 aa17.45■□□□□ 0.38
CSGALNACT1-204ENST00000517494 TRAPPC12Q8WVT3 735 aa17.45■□□□□ 0.38
CSGALNACT1-204ENST00000517494 LINC01599Q8WXQ3 324 aa17.45■□□□□ 0.38
CSGALNACT1-204ENST00000517494 PPP2R3CQ969Q6 453 aa17.45■□□□□ 0.38
CSGALNACT1-204ENST00000517494 ZNF689Q96CS4 500 aaPredicted RBP17.45■□□□□ 0.38
CSGALNACT1-204ENST00000517494 PLVAPQ9BX97 442 aa17.45■□□□□ 0.38
CSGALNACT1-204ENST00000517494 PLAGL2Q9UPG8 496 aa17.45■□□□□ 0.38
CSGALNACT1-204ENST00000517494 UBIAD1Q9Y5Z9 338 aa17.45■□□□□ 0.38
CSGALNACT1-204ENST00000517494 RALGAPA2Q2PPJ7 1873 aa17.44■□□□□ 0.38
CSGALNACT1-204ENST00000517494 RRN3P2A6NIE6 340 aa17.44■□□□□ 0.38
CSGALNACT1-204ENST00000517494 STXBP3O00186 592 aa17.44■□□□□ 0.38
CSGALNACT1-204ENST00000517494 SMARCA1P28370 1054 aa17.44■□□□□ 0.38
CSGALNACT1-204ENST00000517494 PAK2Q13177 524 aa17.44■□□□□ 0.38
CSGALNACT1-204ENST00000517494 HFE2Q6ZVN8 426 aa17.44■□□□□ 0.38
CSGALNACT1-204ENST00000517494 FBXL18Q96ME1 805 aa17.44■□□□□ 0.38
CSGALNACT1-204ENST00000517494 JADE2Q9NQC1 790 aa17.44■□□□□ 0.38
CSGALNACT1-204ENST00000517494 LRFN2Q9ULH4 789 aa17.44■□□□□ 0.38
CSGALNACT1-204ENST00000517494 PCDHA6Q9UN73 950 aa17.44■□□□□ 0.38
CSGALNACT1-204ENST00000517494 PCDHA8Q9Y5H6 950 aa17.44■□□□□ 0.38
CSGALNACT1-204ENST00000517494 TRPV2Q9Y5S1 764 aa17.44■□□□□ 0.38
CSGALNACT1-204ENST00000517494 MYO7AQ13402 2215 aa17.43■□□□□ 0.38
CSGALNACT1-204ENST00000517494 SH2B2O14492 632 aaPredicted RBP17.43■□□□□ 0.38
CSGALNACT1-204ENST00000517494 PPFIA3O75145 1194 aa17.43■□□□□ 0.38
CSGALNACT1-204ENST00000517494 ITGB1P05556 798 aa17.43■□□□□ 0.38
CSGALNACT1-204ENST00000517494 MCM5P33992 734 aa17.43■□□□□ 0.38
CSGALNACT1-204ENST00000517494 MRE11P49959 708 aa17.43■□□□□ 0.38
CSGALNACT1-204ENST00000517494 GATMP50440 423 aa17.43■□□□□ 0.38
CSGALNACT1-204ENST00000517494 ADGRD2Q7Z7M1 963 aa17.43■□□□□ 0.38
CSGALNACT1-204ENST00000517494 RBM23Q86U06 439 aaKnown RBP17.43■□□□□ 0.38
CSGALNACT1-204ENST00000517494 RNF135Q8IUD6 432 aa17.43■□□□□ 0.38
CSGALNACT1-204ENST00000517494 NPAS4Q8IUM7 802 aa17.43■□□□□ 0.38
CSGALNACT1-204ENST00000517494 CMTR2Q8IYT2 770 aaKnown RBP17.43■□□□□ 0.38
CSGALNACT1-204ENST00000517494 KLHL23Q8NBE8 558 aa17.43■□□□□ 0.38
CSGALNACT1-204ENST00000517494 MAP4K1Q92918 833 aa17.43■□□□□ 0.38
CSGALNACT1-204ENST00000517494 PCYT2Q99447 389 aa17.43■□□□□ 0.38
CSGALNACT1-204ENST00000517494 SDF4Q9BRK5 362 aa17.43■□□□□ 0.38
CSGALNACT1-204ENST00000517494 FTHL17Q9BXU8 183 aa17.43■□□□□ 0.38
CSGALNACT1-204ENST00000517494 LRRC2Q9BYS8 371 aa17.43■□□□□ 0.38
CSGALNACT1-204ENST00000517494 SLC9A2Q9UBY0 812 aa17.43■□□□□ 0.38
CSGALNACT1-204ENST00000517494 GINS2Q9Y248 185 aa17.43■□□□□ 0.38
CSGALNACT1-204ENST00000517494 SLC12A7Q9Y666 1083 aa17.43■□□□□ 0.38
CSGALNACT1-204ENST00000517494 RPLP2P05387 115 aaKnown RBP17.42■□□□□ 0.38
CSGALNACT1-204ENST00000517494 STAG3L1P0CL83 205 aa17.42■□□□□ 0.38
CSGALNACT1-204ENST00000517494 CALM1P0DP23 149 aa17.42■□□□□ 0.38
CSGALNACT1-204ENST00000517494 CALM2P0DP24 149 aa17.42■□□□□ 0.38
CSGALNACT1-204ENST00000517494 CALM3P0DP25 149 aa17.42■□□□□ 0.38
CSGALNACT1-204ENST00000517494 SCG2P13521 617 aa17.42■□□□□ 0.38
CSGALNACT1-204ENST00000517494 DNAJB1P25685 340 aa17.42■□□□□ 0.38
CSGALNACT1-204ENST00000517494 NHLH1Q02575 133 aa17.42■□□□□ 0.38
CSGALNACT1-204ENST00000517494 CAMK1Q14012 370 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms