RNA–Protein interactions for RNA: ENST00000517251.1

SCARNA20.6-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 106 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.6-201ENST00000517251 SHOX2O60902 331 aaPredicted RBP3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 RPS6KA5O75582 802 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 MOCS3O95396 460 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 GH2P01242 217 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 RHOXF2BP0C7M4 288 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 FAM228BP0C875 321 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 CTAGE8P0CG41 777 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 KCNA3P22001 575 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 KLRC1P26715 233 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 CHRNA5P30532 468 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 CYLC1P35663 651 aaPredicted RBP3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 PDE6BP35913 854 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 ECE1P42892 770 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 CASP4P49662 377 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 HSD17B4P51659 736 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 USP11P51784 963 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 AMPD3Q01432 767 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 MAP3K10Q02779 954 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 CKAP4Q07065 602 aaKnown RBP3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 KCNA1Q09470 495 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 TCP10Q12799 353 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 PSMD2Q13200 908 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 SMC1AQ14683 1233 aaKnown RBP3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 SLC18A3Q16572 532 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 C1orf220Q5T0J3 134 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 CCDC122Q5T0U0 273 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 FAM83BQ5T0W9 1011 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 MEX3CQ5U5Q3 659 aaKnown RBP3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 DCAF12L1Q5VU92 463 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 KRT79Q5XKE5 535 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 SLFN13Q68D06 897 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 SLC30A10Q6XR72 485 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 CTAGE6Q86UF2 777 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 C2CD5Q86YS7 1000 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 CTAGE4Q8IX94 777 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 NLGN1Q8N2Q7 840 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 SYT2Q8N9I0 419 aaPredicted RBP3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 TSEN2Q8NCE0 465 aaKnown RBP3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 MTMR14Q8NCE2 650 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 EHBP1Q8NDI1 1231 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 ANKRD20A12PQ8NF67 263 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 TRIM58Q8NG06 486 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 CYP2W1Q8TAV3 490 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 LNX1Q8TBB1 728 aaPredicted RBP3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 PLEKHO2Q8TD55 490 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 ACER1Q8TDN7 264 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 HDAC7Q8WUI4 952 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 TMEM174Q8WUU8 243 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 SECISBP2LQ93073 1101 aaKnown RBP3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 OSBPL9Q96SU4 736 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 NAP1L4Q99733 375 aaKnown RBP3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 RHOXF2Q9BQY4 288 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 POLR3CQ9BUI4 534 aaPredicted RBP3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 SELENOOQ9BVL4 669 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 IFIH1Q9BYX4 1025 aaKnown RBP3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 GLIS2Q9BZE0 524 aaPredicted RBP3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 TSGA10Q9BZW7 698 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 PSTPIP2Q9H939 334 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 VIPAS39Q9H9C1 493 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 KANSL2Q9H9L4 492 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 VAT1LQ9HCJ6 419 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 PDE11AQ9HCR9 933 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 ARFGAP3Q9NP61 516 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 FAM207AQ9NSI2 230 aaPredicted RBP3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 TYW1Q9NV66 732 aaKnown RBP3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 PANK4Q9NVE7 773 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 AIPL1Q9NZN9 384 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 MAGEC2Q9UBF1 373 aaPredicted RBP3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 DMGDHQ9UI17 866 aaKnown RBP3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 FBXL5Q9UKA1 691 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 GUCA1BQ9UMX6 200 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 STXBP5LQ9Y2K9 1186 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 TMX2Q9Y320 296 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 HYOU1Q9Y4L1 999 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 PCDHA13Q9Y5I0 950 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 TDRD15B5MCY1 1934 aaKnown RBP3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 MIA3Q5JRA6 1907 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 SHROOM3Q8TF72 1996 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 SHTN1A0MZ66 631 aa3.58□□□□□ -1.84
SCARNA20.6-201ENST00000517251 MACROD2A1Z1Q3 448 aa3.58□□□□□ -1.84
SCARNA20.6-201ENST00000517251 F5H6K3 240 aa3.58□□□□□ -1.84
SCARNA20.6-201ENST00000517251 F8VZ95 297 aa3.58□□□□□ -1.84
SCARNA20.6-201ENST00000517251 TULP2O00295 520 aa3.58□□□□□ -1.84
SCARNA20.6-201ENST00000517251 MEIS1O00470 390 aa3.58□□□□□ -1.84
SCARNA20.6-201ENST00000517251 DDX3XO00571 662 aaKnown RBP eCLIP3.58□□□□□ -1.84
SCARNA20.6-201ENST00000517251 KRT86O43790 486 aa3.58□□□□□ -1.84
SCARNA20.6-201ENST00000517251 AKAP3O75969 853 aa3.58□□□□□ -1.84
SCARNA20.6-201ENST00000517251 CLSTN1O94985 981 aa3.58□□□□□ -1.84
SCARNA20.6-201ENST00000517251 EYA4O95677 639 aa3.58□□□□□ -1.84
SCARNA20.6-201ENST00000517251 NR3C1P04150 777 aa3.58□□□□□ -1.84
SCARNA20.6-201ENST00000517251 SERPING1P05155 500 aa3.58□□□□□ -1.84
SCARNA20.6-201ENST00000517251 ACTN1P12814 892 aa3.58□□□□□ -1.84
SCARNA20.6-201ENST00000517251 IDEP14735 1019 aa3.58□□□□□ -1.84
SCARNA20.6-201ENST00000517251 PRLRP16471 622 aa3.58□□□□□ -1.84
SCARNA20.6-201ENST00000517251 ERCC3P19447 782 aa3.58□□□□□ -1.84
SCARNA20.6-201ENST00000517251 NR2F2P24468 414 aa3.58□□□□□ -1.84
SCARNA20.6-201ENST00000517251 PON1P27169 355 aa3.58□□□□□ -1.84
SCARNA20.6-201ENST00000517251 ANXA13P27216 316 aa3.58□□□□□ -1.84
SCARNA20.6-201ENST00000517251 ALDH1B1P30837 517 aa3.58□□□□□ -1.84
SCARNA20.6-201ENST00000517251 PTGER2P43116 358 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms