RNA–Protein interactions for RNA: ENST00000515708.5

TSPAN17-209, Transcript of tetraspanin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN17, Length 2,361 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-209ENST00000515708 TBC1D22AQ8WUA7 517 aa18.44■□□□□ 0.54
TSPAN17-209ENST00000515708 RPGRQ92834 1020 aaKnown RBP18.44■□□□□ 0.54
TSPAN17-209ENST00000515708 POLD4Q9HCU8 107 aa18.44■□□□□ 0.54
TSPAN17-209ENST00000515708 SPATA31A6Q5VVP1 1343 aa18.44■□□□□ 0.54
TSPAN17-209ENST00000515708 USP17L10C9JJH3 530 aa18.44■□□□□ 0.54
TSPAN17-209ENST00000515708 KCNK3O14649 394 aa18.44■□□□□ 0.54
TSPAN17-209ENST00000515708 ACTN1P12814 892 aa18.44■□□□□ 0.54
TSPAN17-209ENST00000515708 NR1D1P20393 614 aa18.44■□□□□ 0.54
TSPAN17-209ENST00000515708 LSP1P33241 339 aa18.44■□□□□ 0.54
TSPAN17-209ENST00000515708 RFC4P35249 363 aa18.44■□□□□ 0.54
TSPAN17-209ENST00000515708 HSPA9P38646 679 aaKnown RBP18.44■□□□□ 0.54
TSPAN17-209ENST00000515708 ARSHQ5FYA8 562 aa18.44■□□□□ 0.54
TSPAN17-209ENST00000515708 C10orf76Q5T2E6 689 aa18.44■□□□□ 0.54
TSPAN17-209ENST00000515708 DPY19L2P1Q6NXN4 242 aa18.44■□□□□ 0.54
TSPAN17-209ENST00000515708 ZNF571Q7Z3V5 609 aaPredicted RBP18.44■□□□□ 0.54
TSPAN17-209ENST00000515708 C1orf131Q8NDD1 294 aaKnown RBP18.44■□□□□ 0.54
TSPAN17-209ENST00000515708 ATP6V1G3Q96LB4 118 aa18.44■□□□□ 0.54
TSPAN17-209ENST00000515708 NAP1L4Q99733 375 aaKnown RBP18.44■□□□□ 0.54
TSPAN17-209ENST00000515708 TAF1DQ9H5J8 278 aaPredicted RBP18.44■□□□□ 0.54
TSPAN17-209ENST00000515708 SWAP70Q9UH65 585 aa18.44■□□□□ 0.54
TSPAN17-209ENST00000515708 HDAC9Q9UKV0 1011 aa18.44■□□□□ 0.54
TSPAN17-209ENST00000515708 HSPA1LP34931 641 aa18.43■□□□□ 0.54
TSPAN17-209ENST00000515708 USP11P51784 963 aa18.43■□□□□ 0.54
TSPAN17-209ENST00000515708 CASP5P51878 434 aa18.43■□□□□ 0.54
TSPAN17-209ENST00000515708 GUCY1A3Q02108 690 aa18.43■□□□□ 0.54
TSPAN17-209ENST00000515708 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.43■□□□□ 0.542e-7■■■■■ 64.2
TSPAN17-209ENST00000515708 ZHX3Q9H4I2 956 aa18.43■□□□□ 0.54
TSPAN17-209ENST00000515708 KCNMB3Q9NPA1 279 aa18.43■□□□□ 0.54
TSPAN17-209ENST00000515708 PITPNM2Q9BZ72 1349 aa18.43■□□□□ 0.54
TSPAN17-209ENST00000515708 BTAF1O14981 1849 aa18.43■□□□□ 0.54
TSPAN17-209ENST00000515708 MED24O75448 989 aa18.42■□□□□ 0.54
TSPAN17-209ENST00000515708 KIF4AO95239 1232 aa18.42■□□□□ 0.54
TSPAN17-209ENST00000515708 KRT18P05783 430 aaKnown RBP18.42■□□□□ 0.54
TSPAN17-209ENST00000515708 UCHL3P15374 230 aa18.42■□□□□ 0.54
TSPAN17-209ENST00000515708 SLC9A1P19634 815 aa18.42■□□□□ 0.54
TSPAN17-209ENST00000515708 SLC12A3P55017 1021 aa18.42■□□□□ 0.54
TSPAN17-209ENST00000515708 ERVK-9P63128 1117 aa18.42■□□□□ 0.54
TSPAN17-209ENST00000515708 GPATCH4Q5T3I0 446 aaKnown RBP18.42■□□□□ 0.54
TSPAN17-209ENST00000515708 B4GALNT4Q76KP1 1039 aa18.42■□□□□ 0.54
TSPAN17-209ENST00000515708 KAT2BQ92831 832 aa18.42■□□□□ 0.54
TSPAN17-209ENST00000515708 SPAG5Q96R06 1193 aa18.42■□□□□ 0.54
TSPAN17-209ENST00000515708 ISCUQ9H1K1 167 aa18.42■□□□□ 0.54
TSPAN17-209ENST00000515708 GOLPH3Q9H4A6 298 aa18.42■□□□□ 0.54
TSPAN17-209ENST00000515708 PLCB1Q9NQ66 1216 aa18.42■□□□□ 0.54
TSPAN17-209ENST00000515708 GEMIN8Q9NWZ8 242 aaKnown RBP18.42■□□□□ 0.54
TSPAN17-209ENST00000515708 USP17L15C9J2P7 530 aa18.42■□□□□ 0.54
TSPAN17-209ENST00000515708 USP17L13C9JLJ4 530 aa18.42■□□□□ 0.54
TSPAN17-209ENST00000515708 USP17L11C9JVI0 530 aa18.42■□□□□ 0.54
TSPAN17-209ENST00000515708 USP17L18D6R9N7 530 aa18.42■□□□□ 0.54
TSPAN17-209ENST00000515708 USP17L22D6RA61 530 aa18.42■□□□□ 0.54
TSPAN17-209ENST00000515708 USP17L17D6RBQ6 530 aa18.42■□□□□ 0.54
TSPAN17-209ENST00000515708 USP17L19D6RCP7 530 aa18.42■□□□□ 0.54
TSPAN17-209ENST00000515708 USP17L20D6RJB6 530 aa18.42■□□□□ 0.54
TSPAN17-209ENST00000515708 USP17L24Q0WX57 530 aa18.42■□□□□ 0.54
TSPAN17-209ENST00000515708 USP17L6PQ6QN14 398 aa18.42■□□□□ 0.54
TSPAN17-209ENST00000515708 LRRC57Q8N9N7 239 aa18.42■□□□□ 0.54
TSPAN17-209ENST00000515708 EIF1ADQ8N9N8 165 aaKnown RBP18.42■□□□□ 0.54
TSPAN17-209ENST00000515708 EPN3Q9H201 632 aa18.42■□□□□ 0.54
TSPAN17-209ENST00000515708 DHX36Q9H2U1 1008 aaKnown RBP18.42■□□□□ 0.54
TSPAN17-209ENST00000515708 PLAAQ9Y263 795 aa18.42■□□□□ 0.54
TSPAN17-209ENST00000515708 BZW2Q9Y6E2 419 aaKnown RBP18.42■□□□□ 0.54
TSPAN17-209ENST00000515708 ATXN2Q99700 1313 aaKnown RBP18.42■□□□□ 0.54
TSPAN17-209ENST00000515708 KIF13BQ9NQT8 1826 aa18.42■□□□□ 0.54
TSPAN17-209ENST00000515708 POTEFA5A3E0 1075 aa18.41■□□□□ 0.54
TSPAN17-209ENST00000515708 HMGB1P1B2RPK0 211 aaPredicted RBP18.41■□□□□ 0.54
TSPAN17-209ENST00000515708 SLC26A4O43511 780 aa18.41■□□□□ 0.54
TSPAN17-209ENST00000515708 POTEIP0CG38 1075 aa18.41■□□□□ 0.54
TSPAN17-209ENST00000515708 ECHS1P30084 290 aa18.41■□□□□ 0.54
TSPAN17-209ENST00000515708 INPP5BP32019 993 aa18.41■□□□□ 0.54
TSPAN17-209ENST00000515708 STAT3P40763 770 aa18.41■□□□□ 0.54
TSPAN17-209ENST00000515708 PRR5LQ6MZQ0 368 aa18.41■□□□□ 0.54
TSPAN17-209ENST00000515708 POTEGQ6S5H5 508 aa18.41■□□□□ 0.54
TSPAN17-209ENST00000515708 POTEEQ6S8J3 1075 aa18.41■□□□□ 0.54
TSPAN17-209ENST00000515708 KCTD1Q719H9 257 aa18.41■□□□□ 0.54
TSPAN17-209ENST00000515708 FRMD5Q7Z6J6 570 aa18.41■□□□□ 0.54
TSPAN17-209ENST00000515708 SCFD2Q8WU76 684 aa18.41■□□□□ 0.54
TSPAN17-209ENST00000515708 PBKQ96KB5 322 aa18.41■□□□□ 0.54
TSPAN17-209ENST00000515708 DDX4Q9NQI0 724 aaKnown RBP18.41■□□□□ 0.54
TSPAN17-209ENST00000515708 ARMCX3Q9UH62 379 aaPredicted RBP18.41■□□□□ 0.54
TSPAN17-209ENST00000515708 SERPINB13Q9UIV8 391 aa18.41■□□□□ 0.54
TSPAN17-209ENST00000515708 NAGPAQ9UK23 515 aa18.41■□□□□ 0.54
TSPAN17-209ENST00000515708 TRAF3IP3Q9Y228 551 aa18.41■□□□□ 0.54
TSPAN17-209ENST00000515708 PPP1R37O75864 691 aa18.41■□□□□ 0.54
TSPAN17-209ENST00000515708 HLTFQ14527 1009 aaKnown RBP eCLIP18.41■□□□□ 0.54
TSPAN17-209ENST00000515708 MEX3CQ5U5Q3 659 aaKnown RBP18.41■□□□□ 0.54
TSPAN17-209ENST00000515708 MAATS1Q7Z4T9 603 aa18.41■□□□□ 0.54
TSPAN17-209ENST00000515708 CERKQ8TCT0 537 aa18.41■□□□□ 0.54
TSPAN17-209ENST00000515708 ACTRT1Q8TDG2 376 aa18.41■□□□□ 0.54
TSPAN17-209ENST00000515708 GJD4Q96KN9 370 aaPredicted RBP18.41■□□□□ 0.54
TSPAN17-209ENST00000515708 POLLQ9UGP5 575 aa18.41■□□□□ 0.54
TSPAN17-209ENST00000515708 C10orf71Q711Q0 1435 aa18.41■□□□□ 0.54
TSPAN17-209ENST00000515708 AFPP02771 609 aaKnown RBP18.4■□□□□ 0.54
TSPAN17-209ENST00000515708 ITGB3BPQ13352 177 aaPredicted RBP18.4■□□□□ 0.54
TSPAN17-209ENST00000515708 IFI16Q16666 785 aaKnown RBP18.4■□□□□ 0.54
TSPAN17-209ENST00000515708 CRY2Q49AN0 593 aa18.4■□□□□ 0.54
TSPAN17-209ENST00000515708 CEP85LQ5SZL2 805 aa18.4■□□□□ 0.54
TSPAN17-209ENST00000515708 CEP104O60308 925 aa18.4■□□□□ 0.54
TSPAN17-209ENST00000515708 PON1P27169 355 aa18.4■□□□□ 0.54
TSPAN17-209ENST00000515708 MMP14P50281 582 aa18.4■□□□□ 0.54
TSPAN17-209ENST00000515708 CUL1Q13616 776 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms