RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 COL25A1Q9BXS0 654 aaPredicted RBP11.92□□□□□ -0.5
HMGXB3-205ENST00000514469 OSBPL7Q9BZF2 842 aa11.92□□□□□ -0.5
HMGXB3-205ENST00000514469 NCOA5Q9HCD5 579 aaKnown RBP11.92□□□□□ -0.5
HMGXB3-205ENST00000514469 PPP4R2Q9NY27 417 aa11.92□□□□□ -0.5
HMGXB3-205ENST00000514469 TUBE1Q9UJT0 475 aa11.92□□□□□ -0.5
HMGXB3-205ENST00000514469 CYP46A1Q9Y6A2 500 aa11.92□□□□□ -0.5
HMGXB3-205ENST00000514469 TRIP12Q14669 1992 aaPredicted RBP11.92□□□□□ -0.5
HMGXB3-205ENST00000514469 IGKV6D-21A0A0A0MT36 114 aa11.91□□□□□ -0.5
HMGXB3-205ENST00000514469 PPFIA3O75145 1194 aa11.91□□□□□ -0.5
HMGXB3-205ENST00000514469 ATG7O95352 703 aa11.91□□□□□ -0.5
HMGXB3-205ENST00000514469 CCNE2O96020 404 aa11.91□□□□□ -0.5
HMGXB3-205ENST00000514469 POU3F3P20264 500 aaPredicted RBP11.91□□□□□ -0.5
HMGXB3-205ENST00000514469 IGFBP4P22692 258 aa11.91□□□□□ -0.5
HMGXB3-205ENST00000514469 GNA11P29992 359 aa11.91□□□□□ -0.5
HMGXB3-205ENST00000514469 CCT2P78371 535 aaKnown RBP11.91□□□□□ -0.5
HMGXB3-205ENST00000514469 SETQ01105 290 aaPredicted RBP11.91□□□□□ -0.5
HMGXB3-205ENST00000514469 AKAP17AQ02040 695 aaKnown RBP11.91□□□□□ -0.5
HMGXB3-205ENST00000514469 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.91□□□□□ -0.5
HMGXB3-205ENST00000514469 PLPPR4Q7Z2D5 763 aa11.91□□□□□ -0.5
HMGXB3-205ENST00000514469 SPRED2Q7Z698 418 aa11.91□□□□□ -0.5
HMGXB3-205ENST00000514469 BICD2Q8TD16 824 aa11.91□□□□□ -0.5
HMGXB3-205ENST00000514469 SEPT8Q92599 483 aa11.91□□□□□ -0.5
HMGXB3-205ENST00000514469 APBB2Q92870 758 aa11.91□□□□□ -0.5
HMGXB3-205ENST00000514469 RAD9AQ99638 391 aa11.91□□□□□ -0.5
HMGXB3-205ENST00000514469 SLC26A6Q9BXS9 759 aa11.91□□□□□ -0.5
HMGXB3-205ENST00000514469 AZI2Q9H6S1 392 aa11.91□□□□□ -0.5
HMGXB3-205ENST00000514469 CERS4Q9HA82 394 aa11.91□□□□□ -0.5
HMGXB3-205ENST00000514469 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.9□□□□□ -0.5
HMGXB3-205ENST00000514469 RRN3P2A6NIE6 340 aa11.9□□□□□ -0.5
HMGXB3-205ENST00000514469 DHX15O43143 795 aaKnown RBP11.9□□□□□ -0.5
HMGXB3-205ENST00000514469 CHRNA1P02708 482 aa11.9□□□□□ -0.5
HMGXB3-205ENST00000514469 AMHP03971 560 aa11.9□□□□□ -0.5
HMGXB3-205ENST00000514469 RPLP2P05387 115 aaKnown RBP11.9□□□□□ -0.5
HMGXB3-205ENST00000514469 INSRRP14616 1297 aa11.9□□□□□ -0.5
HMGXB3-205ENST00000514469 ZNF76P36508 570 aa11.9□□□□□ -0.5
HMGXB3-205ENST00000514469 PLCB4Q15147 1175 aa11.9□□□□□ -0.5
HMGXB3-205ENST00000514469 ABHD15Q6UXT9 468 aa11.9□□□□□ -0.5
HMGXB3-205ENST00000514469 MICAL3Q7RTP6 2002 aa11.9□□□□□ -0.5
HMGXB3-205ENST00000514469 PLA2G4DQ86XP0 818 aa11.9□□□□□ -0.5
HMGXB3-205ENST00000514469 ARNTL2Q8WYA1 636 aa11.9□□□□□ -0.5
HMGXB3-205ENST00000514469 ZNF274Q96GC6 653 aaPredicted RBP11.9□□□□□ -0.5
HMGXB3-205ENST00000514469 ZBED2Q9BTP6 218 aa11.9□□□□□ -0.5
HMGXB3-205ENST00000514469 UPF3BQ9BZI7 483 aaKnown RBP11.9□□□□□ -0.5
HMGXB3-205ENST00000514469 PRDM6Q9NQX0 595 aa11.9□□□□□ -0.5
HMGXB3-205ENST00000514469 SH3GLB2Q9NR46 395 aa11.9□□□□□ -0.5
HMGXB3-205ENST00000514469 VPS54Q9P1Q0 977 aa11.9□□□□□ -0.5
HMGXB3-205ENST00000514469 TRPC6Q9Y210 931 aa11.9□□□□□ -0.5
HMGXB3-205ENST00000514469 MTCH2Q9Y6C9 303 aa11.9□□□□□ -0.5
HMGXB3-205ENST00000514469 LINC01553A4QN01 128 aa11.89□□□□□ -0.51
HMGXB3-205ENST00000514469 RFXAPO00287 272 aa11.89□□□□□ -0.51
HMGXB3-205ENST00000514469 IPO5O00410 1097 aaKnown RBP11.89□□□□□ -0.51
HMGXB3-205ENST00000514469 LPXNO60711 386 aa11.89□□□□□ -0.51
HMGXB3-205ENST00000514469 CIITAP33076 1130 aa11.89□□□□□ -0.51
HMGXB3-205ENST00000514469 SLC26A2P50443 739 aa11.89□□□□□ -0.51
HMGXB3-205ENST00000514469 STAT5BP51692 787 aa11.89□□□□□ -0.51
HMGXB3-205ENST00000514469 IGBP1P78318 339 aa11.89□□□□□ -0.51
HMGXB3-205ENST00000514469 HTRA4P83105 476 aaPredicted RBP11.89□□□□□ -0.51
HMGXB3-205ENST00000514469 RSPH3Q86UC2 560 aa11.89□□□□□ -0.51
HMGXB3-205ENST00000514469 CCDC60Q8IWA6 550 aaPredicted RBP11.89□□□□□ -0.51
HMGXB3-205ENST00000514469 MYOCDQ8IZQ8 938 aa11.89□□□□□ -0.51
HMGXB3-205ENST00000514469 SP7Q8TDD2 431 aaPredicted RBP11.89□□□□□ -0.51
HMGXB3-205ENST00000514469 RASGRP4Q8TDF6 673 aa11.89□□□□□ -0.51
HMGXB3-205ENST00000514469 DNAJB3Q8WWF6 145 aa11.89□□□□□ -0.51
HMGXB3-205ENST00000514469 PPM1EQ8WY54 764 aa11.89□□□□□ -0.51
HMGXB3-205ENST00000514469 LENG9Q96B70 501 aa11.89□□□□□ -0.51
HMGXB3-205ENST00000514469 ZBTB10Q96DT7 871 aa11.89□□□□□ -0.51
HMGXB3-205ENST00000514469 IFIH1Q9BYX4 1025 aaKnown RBP11.89□□□□□ -0.51
HMGXB3-205ENST00000514469 THEGQ9P2T0 379 aa11.89□□□□□ -0.51
HMGXB3-205ENST00000514469 POTEB3A0JP26 581 aa11.88□□□□□ -0.51
HMGXB3-205ENST00000514469 DDX39AO00148 427 aaKnown RBP11.88□□□□□ -0.51
HMGXB3-205ENST00000514469 GHRP10912 638 aa11.88□□□□□ -0.51
HMGXB3-205ENST00000514469 ERVK-21P61565 698 aa11.88□□□□□ -0.51
HMGXB3-205ENST00000514469 MRPS6P82932 125 aaKnown RBP11.88□□□□□ -0.51
HMGXB3-205ENST00000514469 GRB10Q13322 594 aa11.88□□□□□ -0.51
HMGXB3-205ENST00000514469 LPIN1Q14693 890 aa11.88□□□□□ -0.51
HMGXB3-205ENST00000514469 CCDC85BQ15834 202 aaPredicted RBP11.88□□□□□ -0.51
HMGXB3-205ENST00000514469 TJAP1Q5JTD0 557 aa11.88□□□□□ -0.51
HMGXB3-205ENST00000514469 FBXO47Q5MNV8 452 aa11.88□□□□□ -0.51
HMGXB3-205ENST00000514469 FAM160B1Q5W0V3 765 aa11.88□□□□□ -0.51
HMGXB3-205ENST00000514469 ZNF746Q6NUN9 644 aaPredicted RBP11.88□□□□□ -0.51
HMGXB3-205ENST00000514469 FAM117BQ6P1L5 589 aa11.88□□□□□ -0.51
HMGXB3-205ENST00000514469 POTEBQ6S5H4 581 aa11.88□□□□□ -0.51
HMGXB3-205ENST00000514469 TRIM22Q8IYM9 498 aa11.88□□□□□ -0.51
HMGXB3-205ENST00000514469 TRAPPC12Q8WVT3 735 aa11.88□□□□□ -0.51
HMGXB3-205ENST00000514469 TNPO1Q92973 898 aaKnown RBP11.88□□□□□ -0.51
HMGXB3-205ENST00000514469 TOP1MTQ969P6 601 aa11.88□□□□□ -0.51
HMGXB3-205ENST00000514469 ZNF577Q9BSK1 485 aa11.88□□□□□ -0.51
HMGXB3-205ENST00000514469 TBC1D22BQ9NU19 505 aa11.88□□□□□ -0.51
HMGXB3-205ENST00000514469 PDRG1Q9NUG6 133 aa11.88□□□□□ -0.51
HMGXB3-205ENST00000514469 INSL6Q9Y581 213 aa11.88□□□□□ -0.51
HMGXB3-205ENST00000514469 CDY2AQ9Y6F7 541 aa11.88□□□□□ -0.51
HMGXB3-205ENST00000514469 M0R2N6 131 aa11.87□□□□□ -0.51
HMGXB3-205ENST00000514469 CPLX1O14810 134 aa11.87□□□□□ -0.51
HMGXB3-205ENST00000514469 BACH1O14867 736 aa11.87□□□□□ -0.51
HMGXB3-205ENST00000514469 GTPBP6O43824 516 aaPredicted RBP11.87□□□□□ -0.51
HMGXB3-205ENST00000514469 EDIL3O43854 480 aa11.87□□□□□ -0.51
HMGXB3-205ENST00000514469 DEXIO95424 95 aa11.87□□□□□ -0.51
HMGXB3-205ENST00000514469 ANAPC15P60006 121 aa11.87□□□□□ -0.51
HMGXB3-205ENST00000514469 SSRP1Q08945 709 aaKnown RBP11.87□□□□□ -0.51
HMGXB3-205ENST00000514469 PRR16Q569H4 304 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms