RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 RASA1P20936 1047 aa3.86□□□□□ -1.79
CHD1-211ENST00000514344 PBX3P40426 434 aa3.86□□□□□ -1.79
CHD1-211ENST00000514344 SHC2P98077 582 aa3.86□□□□□ -1.79
CHD1-211ENST00000514344 ITIH3Q06033 890 aa3.86□□□□□ -1.79
CHD1-211ENST00000514344 TKFCQ3LXA3 575 aa3.86□□□□□ -1.79
CHD1-211ENST00000514344 TPRNQ4KMQ1 711 aa3.86□□□□□ -1.79
CHD1-211ENST00000514344 NAALADL2Q58DX5 795 aa3.86□□□□□ -1.79
CHD1-211ENST00000514344 IL31Q6EBC2 164 aa3.86□□□□□ -1.79
CHD1-211ENST00000514344 CCDC62Q6P9F0 684 aa3.86□□□□□ -1.79
CHD1-211ENST00000514344 RUFY4Q6ZNE9 571 aa3.86□□□□□ -1.79
CHD1-211ENST00000514344 RNF207Q6ZRF8 634 aa3.86□□□□□ -1.79
CHD1-211ENST00000514344 PRR23BQ6ZRT6 265 aa3.86□□□□□ -1.79
CHD1-211ENST00000514344 ZDHHC14Q8IZN3 488 aa3.86□□□□□ -1.79
CHD1-211ENST00000514344 CHURC1Q8WUH1 139 aa3.86□□□□□ -1.79
CHD1-211ENST00000514344 ACSF2Q96CM8 615 aaPredicted RBP3.86□□□□□ -1.79
CHD1-211ENST00000514344 DDRGK1Q96HY6 314 aa3.86□□□□□ -1.79
CHD1-211ENST00000514344 CDCA3Q99618 268 aaPredicted RBP3.86□□□□□ -1.79
CHD1-211ENST00000514344 RNPEPQ9H4A4 650 aa3.86□□□□□ -1.79
CHD1-211ENST00000514344 DLGAP2Q9P1A6 1054 aa3.86□□□□□ -1.79
CHD1-211ENST00000514344 PRR12Q9ULL5 1215 aa3.86□□□□□ -1.79
CHD1-211ENST00000514344 PCDHB12Q9Y5F1 795 aa3.86□□□□□ -1.79
CHD1-211ENST00000514344 SPDYE4A6NLX3 237 aa3.85□□□□□ -1.79
CHD1-211ENST00000514344 MINDY4BA8MYZ0 360 aa3.85□□□□□ -1.79
CHD1-211ENST00000514344 HAS3O00219 553 aa3.85□□□□□ -1.79
CHD1-211ENST00000514344 FDX1P10109 184 aa3.85□□□□□ -1.79
CHD1-211ENST00000514344 SLC16A2P36021 539 aa3.85□□□□□ -1.79
CHD1-211ENST00000514344 HSDL1Q3SXM5 330 aa3.85□□□□□ -1.79
CHD1-211ENST00000514344 ATAT1Q5SQI0 421 aa3.85□□□□□ -1.79
CHD1-211ENST00000514344 CTR9Q6PD62 1173 aa3.85□□□□□ -1.79
CHD1-211ENST00000514344 TMEM184AQ6ZMB5 413 aa3.85□□□□□ -1.79
CHD1-211ENST00000514344 TMC7Q7Z402 723 aa3.85□□□□□ -1.79
CHD1-211ENST00000514344 RPAP2Q8IXW5 612 aaPredicted RBP3.85□□□□□ -1.79
CHD1-211ENST00000514344 GPR152Q8TDT2 470 aa3.85□□□□□ -1.79
CHD1-211ENST00000514344 DNAJC2Q99543 621 aaKnown RBP3.85□□□□□ -1.79
CHD1-211ENST00000514344 MPHOSPH6Q99547 160 aaKnown RBP3.85□□□□□ -1.79
CHD1-211ENST00000514344 PRKRIP1Q9H875 184 aaPredicted RBP3.85□□□□□ -1.79
CHD1-211ENST00000514344 ATP8A2Q9NTI2 1148 aa3.85□□□□□ -1.79
CHD1-211ENST00000514344 SETD4Q9NVD3 440 aa3.85□□□□□ -1.79
CHD1-211ENST00000514344 HDAC5Q9UQL6 1122 aa3.85□□□□□ -1.79
CHD1-211ENST00000514344 FSD2A1L4K1 749 aa3.85□□□□□ -1.79
CHD1-211ENST00000514344 GOLIM4O00461 696 aa3.85□□□□□ -1.79
CHD1-211ENST00000514344 TTLL1O95922 423 aa3.85□□□□□ -1.79
CHD1-211ENST00000514344 CHRNA1P02708 482 aa3.85□□□□□ -1.79
CHD1-211ENST00000514344 ICAM1P05362 532 aa3.85□□□□□ -1.79
CHD1-211ENST00000514344 MTHFRP42898 656 aa3.85□□□□□ -1.79
CHD1-211ENST00000514344 SOWAHCQ53LP3 525 aaPredicted RBP3.85□□□□□ -1.79
CHD1-211ENST00000514344 CMTR2Q8IYT2 770 aaKnown RBP3.85□□□□□ -1.79
CHD1-211ENST00000514344 STAG1Q8WVM7 1258 aa3.85□□□□□ -1.79
CHD1-211ENST00000514344 EAF2Q96CJ1 260 aaPredicted RBP3.85□□□□□ -1.79
CHD1-211ENST00000514344 ZNF512BQ96KM6 892 aaPredicted RBP3.85□□□□□ -1.79
CHD1-211ENST00000514344 SMC4Q9NTJ3 1288 aa3.85□□□□□ -1.79
CHD1-211ENST00000514344 SEMA4GQ9NTN9 838 aa3.85□□□□□ -1.79
CHD1-211ENST00000514344 MTMR4Q9NYA4 1195 aa3.85□□□□□ -1.79
CHD1-211ENST00000514344 WNT16Q9UBV4 365 aa3.85□□□□□ -1.79
CHD1-211ENST00000514344 USTQ9Y2C2 406 aa3.85□□□□□ -1.79
CHD1-211ENST00000514344 MRVI1Q9Y6F6 885 aa3.85□□□□□ -1.79
CHD1-211ENST00000514344 SLC4A4Q9Y6R1 1079 aa3.85□□□□□ -1.79
CHD1-211ENST00000514344 COL4A3Q01955 1670 aa3.85□□□□□ -1.79
CHD1-211ENST00000514344 H3BRB1 525 aa3.84□□□□□ -1.79
CHD1-211ENST00000514344 TOP3BO95985 862 aaKnown RBP3.84□□□□□ -1.79
CHD1-211ENST00000514344 SMIM10L2AP0DMW4 78 aa3.84□□□□□ -1.79
CHD1-211ENST00000514344 SMIM10L2BP0DMW5 78 aa3.84□□□□□ -1.79
CHD1-211ENST00000514344 CD72P21854 359 aa3.84□□□□□ -1.79
CHD1-211ENST00000514344 EDNRBP24530 442 aa3.84□□□□□ -1.79
CHD1-211ENST00000514344 FOXC1Q12948 553 aa3.84□□□□□ -1.79
CHD1-211ENST00000514344 LPIN1Q14693 890 aa3.84□□□□□ -1.79
CHD1-211ENST00000514344 CCDC6Q16204 474 aa3.84□□□□□ -1.79
CHD1-211ENST00000514344 CCDC149Q6ZUS6 474 aa3.84□□□□□ -1.79
CHD1-211ENST00000514344 FAM160B2Q86V87 743 aa3.84□□□□□ -1.79
CHD1-211ENST00000514344 GMCL1P1Q8NEA9 526 aa3.84□□□□□ -1.79
CHD1-211ENST00000514344 PJA1Q8NG27 643 aa3.84□□□□□ -1.79
CHD1-211ENST00000514344 RASGRP4Q8TDF6 673 aa3.84□□□□□ -1.79
CHD1-211ENST00000514344 LINC01599Q8WXQ3 324 aa3.84□□□□□ -1.79
CHD1-211ENST00000514344 CASP10Q92851 521 aa3.84□□□□□ -1.79
CHD1-211ENST00000514344 EPC1Q9H2F5 836 aa3.84□□□□□ -1.79
CHD1-211ENST00000514344 TUT1Q9H6E5 874 aaKnown RBP3.84□□□□□ -1.79
CHD1-211ENST00000514344 ARHGEF3Q9NR81 526 aa3.84□□□□□ -1.79
CHD1-211ENST00000514344 RAB23Q9ULC3 237 aa3.84□□□□□ -1.79
CHD1-211ENST00000514344 STX8Q9UNK0 236 aa3.84□□□□□ -1.79
CHD1-211ENST00000514344 PCDHGA2Q9Y5H1 932 aa3.84□□□□□ -1.79
CHD1-211ENST00000514344 TEP1Q99973 2627 aaKnown RBP3.84□□□□□ -1.79
CHD1-211ENST00000514344 GREB1LQ9C091 1923 aaPredicted RBP3.84□□□□□ -1.79
CHD1-211ENST00000514344 TCRBV5S4A2TA0A5A2 114 aa3.84□□□□□ -1.79
CHD1-211ENST00000514344 EIF4E1BA6NMX2 242 aaKnown RBP3.84□□□□□ -1.79
CHD1-211ENST00000514344 TAF4O00268 1085 aa3.84□□□□□ -1.79
CHD1-211ENST00000514344 IGSF3O75054 1194 aa3.84□□□□□ -1.79
CHD1-211ENST00000514344 SURF6O75683 361 aaKnown RBP3.84□□□□□ -1.79
CHD1-211ENST00000514344 CD52P31358 61 aa3.84□□□□□ -1.79
CHD1-211ENST00000514344 UBE3AQ05086 875 aa3.84□□□□□ -1.79
CHD1-211ENST00000514344 MTX1Q13505 466 aa3.84□□□□□ -1.79
CHD1-211ENST00000514344 UBXN2BQ14CS0 331 aa3.84□□□□□ -1.79
CHD1-211ENST00000514344 PTPN14Q15678 1187 aa3.84□□□□□ -1.79
CHD1-211ENST00000514344 CCDC96Q2M329 555 aa3.84□□□□□ -1.79
CHD1-211ENST00000514344 USH1GQ495M9 461 aa3.84□□□□□ -1.79
CHD1-211ENST00000514344 SYDE2Q5VT97 1194 aa3.84□□□□□ -1.79
CHD1-211ENST00000514344 KIAA1841Q6NSI8 718 aa3.84□□□□□ -1.79
CHD1-211ENST00000514344 C19orf48Q6RUI8 117 aa3.84□□□□□ -1.79
CHD1-211ENST00000514344 PRR23CQ6ZRP0 262 aa3.84□□□□□ -1.79
CHD1-211ENST00000514344 ZNF444Q8N0Y2 327 aaPredicted RBP3.84□□□□□ -1.79
CHD1-211ENST00000514344 KDF1Q8NAX2 398 aaPredicted RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms