RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 MIER3Q7Z3K6 550 aa11.05□□□□□ -0.64
TOPBP1-209ENST00000513818 C4orf32Q8N8J7 132 aa11.05□□□□□ -0.64
TOPBP1-209ENST00000513818 SEPT1Q8WYJ6 367 aa11.05□□□□□ -0.64
TOPBP1-209ENST00000513818 GLG1Q92896 1179 aa11.05□□□□□ -0.64
TOPBP1-209ENST00000513818 RIT2Q99578 217 aa11.05□□□□□ -0.64
TOPBP1-209ENST00000513818 ARID3AQ99856 593 aa11.05□□□□□ -0.64
TOPBP1-209ENST00000513818 C16orf70Q9BSU1 422 aa11.05□□□□□ -0.64
TOPBP1-209ENST00000513818 TSEN34Q9BSV6 310 aaKnown RBP11.05□□□□□ -0.64
TOPBP1-209ENST00000513818 TTC12Q9H892 705 aaPredicted RBP11.05□□□□□ -0.64
TOPBP1-209ENST00000513818 DISC1Q9NRI5 854 aa11.05□□□□□ -0.64
TOPBP1-209ENST00000513818 POLR3EQ9NVU0 708 aa11.05□□□□□ -0.64
TOPBP1-209ENST00000513818 STK25O00506 426 aa11.04□□□□□ -0.64
TOPBP1-209ENST00000513818 TBX3O15119 743 aa11.04□□□□□ -0.64
TOPBP1-209ENST00000513818 PQBP1O60828 265 aaKnown RBP11.04□□□□□ -0.64
TOPBP1-209ENST00000513818 BAG4O95429 457 aaKnown RBP11.04□□□□□ -0.64
TOPBP1-209ENST00000513818 TECP42680 631 aa11.04□□□□□ -0.64
TOPBP1-209ENST00000513818 RTP1P59025 263 aa11.04□□□□□ -0.64
TOPBP1-209ENST00000513818 CYP4A11Q02928 519 aa11.04□□□□□ -0.64
TOPBP1-209ENST00000513818 GRIN1Q05586 938 aa11.04□□□□□ -0.64
TOPBP1-209ENST00000513818 ITGA7Q13683 1181 aa11.04□□□□□ -0.64
TOPBP1-209ENST00000513818 GSE1Q14687 1217 aa11.04□□□□□ -0.64
TOPBP1-209ENST00000513818 KIAA0753Q2KHM9 967 aa11.04□□□□□ -0.64
TOPBP1-209ENST00000513818 NBPF20Q3BBV1 942 aa11.04□□□□□ -0.64
TOPBP1-209ENST00000513818 ZNF746Q6NUN9 644 aaPredicted RBP11.04□□□□□ -0.64
TOPBP1-209ENST00000513818 SWSAP1Q6NVH7 229 aa11.04□□□□□ -0.64
TOPBP1-209ENST00000513818 MIS18BP1Q6P0N0 1132 aa11.04□□□□□ -0.64
TOPBP1-209ENST00000513818 B3GNT9Q6UX72 402 aa11.04□□□□□ -0.64
TOPBP1-209ENST00000513818 ABHD15Q6UXT9 468 aa11.04□□□□□ -0.64
TOPBP1-209ENST00000513818 BANK1Q8NDB2 785 aa11.04□□□□□ -0.64
TOPBP1-209ENST00000513818 ZBTB10Q96DT7 871 aa11.04□□□□□ -0.64
TOPBP1-209ENST00000513818 FAM20AQ96MK3 541 aa11.04□□□□□ -0.64
TOPBP1-209ENST00000513818 ZSCAN16Q9H4T2 348 aaPredicted RBP11.04□□□□□ -0.64
TOPBP1-209ENST00000513818 TFIP11Q9UBB9 837 aaKnown RBP11.04□□□□□ -0.64
TOPBP1-209ENST00000513818 GABBR1Q9UBS5 961 aa11.04□□□□□ -0.64
TOPBP1-209ENST00000513818 ATP11BQ9Y2G3 1177 aa11.04□□□□□ -0.64
TOPBP1-209ENST00000513818 EMSYQ7Z589 1322 aa11.04□□□□□ -0.64
TOPBP1-209ENST00000513818 IGSF9BQ9UPX0 1349 aa11.04□□□□□ -0.64
TOPBP1-209ENST00000513818 A0A0U1RQG5 324 aaPredicted RBP11.03□□□□□ -0.64
TOPBP1-209ENST00000513818 TMEM150BA6NC51 233 aa11.03□□□□□ -0.64
TOPBP1-209ENST00000513818 VWA3AA6NCI4 1184 aa11.03□□□□□ -0.64
TOPBP1-209ENST00000513818 H3BRB1 525 aa11.03□□□□□ -0.64
TOPBP1-209ENST00000513818 LGR5O75473 907 aa11.03□□□□□ -0.64
TOPBP1-209ENST00000513818 PSAPP07602 524 aa11.03□□□□□ -0.64
TOPBP1-209ENST00000513818 MARCKSP29966 332 aaPredicted RBP11.03□□□□□ -0.64
TOPBP1-209ENST00000513818 ATP2C1P98194 919 aaPredicted RBP11.03□□□□□ -0.64
TOPBP1-209ENST00000513818 DNM1Q05193 864 aaKnown RBP11.03□□□□□ -0.64
TOPBP1-209ENST00000513818 PPP2R5CQ13362 524 aa11.03□□□□□ -0.64
TOPBP1-209ENST00000513818 ORC2Q13416 577 aaPredicted RBP11.03□□□□□ -0.64
TOPBP1-209ENST00000513818 HIC1Q14526 733 aa11.03□□□□□ -0.64
TOPBP1-209ENST00000513818 PTPAQ15257 358 aa11.03□□□□□ -0.64
TOPBP1-209ENST00000513818 PDXDC2PQ6P474 469 aa11.03□□□□□ -0.64
TOPBP1-209ENST00000513818 SLC39A5Q6ZMH5 540 aa11.03□□□□□ -0.64
TOPBP1-209ENST00000513818 SMAP1Q8IYB5 467 aaPredicted RBP11.03□□□□□ -0.64
TOPBP1-209ENST00000513818 SLFN12Q8IYM2 578 aa11.03□□□□□ -0.64
TOPBP1-209ENST00000513818 TRAPPC12Q8WVT3 735 aa11.03□□□□□ -0.64
TOPBP1-209ENST00000513818 DYDC2Q96IM9 177 aa11.03□□□□□ -0.64
TOPBP1-209ENST00000513818 RNPEPQ9H4A4 650 aa11.03□□□□□ -0.64
TOPBP1-209ENST00000513818 TUT1Q9H6E5 874 aaKnown RBP11.03□□□□□ -0.64
TOPBP1-209ENST00000513818 ZNF302Q9NR11 478 aa11.03□□□□□ -0.64
TOPBP1-209ENST00000513818 RGL1Q9NZL6 768 aa11.03□□□□□ -0.64
TOPBP1-209ENST00000513818 WRAP73Q9P2S5 460 aaPredicted RBP11.03□□□□□ -0.64
TOPBP1-209ENST00000513818 PCDHA12Q9UN75 941 aa11.03□□□□□ -0.64
TOPBP1-209ENST00000513818 PCDHA10Q9Y5I2 948 aa11.03□□□□□ -0.64
TOPBP1-209ENST00000513818 ARID2Q68CP9 1835 aa11.02□□□□□ -0.64
TOPBP1-209ENST00000513818 A0A087WWV3 80 aa11.02□□□□□ -0.65
TOPBP1-209ENST00000513818 IGKV6D-21A0A0A0MT36 114 aa11.02□□□□□ -0.65
TOPBP1-209ENST00000513818 ARVCFO00192 962 aa11.02□□□□□ -0.65
TOPBP1-209ENST00000513818 HAS3O00219 553 aa11.02□□□□□ -0.65
TOPBP1-209ENST00000513818 ZNF862O60290 1169 aa11.02□□□□□ -0.65
TOPBP1-209ENST00000513818 KPNA6O60684 536 aa11.02□□□□□ -0.65
TOPBP1-209ENST00000513818 PPFIA4O75335 1185 aa11.02□□□□□ -0.65
TOPBP1-209ENST00000513818 ATG7O95352 703 aa11.02□□□□□ -0.65
TOPBP1-209ENST00000513818 SMIM10L2AP0DMW4 78 aa11.02□□□□□ -0.65
TOPBP1-209ENST00000513818 SMIM10L2BP0DMW5 78 aa11.02□□□□□ -0.65
TOPBP1-209ENST00000513818 ATP4AP20648 1035 aa11.02□□□□□ -0.65
TOPBP1-209ENST00000513818 CDC25AP30304 524 aa11.02□□□□□ -0.65
TOPBP1-209ENST00000513818 STAT5BP51692 787 aa11.02□□□□□ -0.65
TOPBP1-209ENST00000513818 JAK3P52333 1124 aa11.02□□□□□ -0.65
TOPBP1-209ENST00000513818 IGBP1P78318 339 aa11.02□□□□□ -0.65
TOPBP1-209ENST00000513818 ZNF200P98182 395 aaPredicted RBP11.02□□□□□ -0.65
TOPBP1-209ENST00000513818 PRKCEQ02156 737 aa11.02□□□□□ -0.65
TOPBP1-209ENST00000513818 CTTNQ14247 550 aaKnown RBP11.02□□□□□ -0.65
TOPBP1-209ENST00000513818 PLCB4Q15147 1175 aa11.02□□□□□ -0.65
TOPBP1-209ENST00000513818 FAM160B1Q5W0V3 765 aa11.02□□□□□ -0.65
TOPBP1-209ENST00000513818 GDF6Q6KF10 455 aaPredicted RBP11.02□□□□□ -0.65
TOPBP1-209ENST00000513818 CKAP2LQ8IYA6 745 aa11.02□□□□□ -0.65
TOPBP1-209ENST00000513818 C7orf61Q8IZ16 206 aa11.02□□□□□ -0.65
TOPBP1-209ENST00000513818 SH2D3AQ9BRG2 576 aa11.02□□□□□ -0.65
TOPBP1-209ENST00000513818 TRPV6Q9H1D0 765 aa11.02□□□□□ -0.65
TOPBP1-209ENST00000513818 AZI2Q9H6S1 392 aa11.02□□□□□ -0.65
TOPBP1-209ENST00000513818 TRMT13Q9NUP7 481 aaKnown RBP11.02□□□□□ -0.65
TOPBP1-209ENST00000513818 HDAC6Q9UBN7 1215 aa11.02□□□□□ -0.65
TOPBP1-209ENST00000513818 ZNF215Q9UL58 517 aaPredicted RBP11.02□□□□□ -0.65
TOPBP1-209ENST00000513818 TRPC6Q9Y210 931 aa11.02□□□□□ -0.65
TOPBP1-209ENST00000513818 MYH9P35579 1960 aaKnown RBP11.01□□□□□ -0.65
TOPBP1-209ENST00000513818 POTEB3A0JP26 581 aa11.01□□□□□ -0.65
TOPBP1-209ENST00000513818 B4GALT4O60513 344 aa11.01□□□□□ -0.65
TOPBP1-209ENST00000513818 MED24O75448 989 aa11.01□□□□□ -0.65
TOPBP1-209ENST00000513818 CABYRO75952 493 aa11.01□□□□□ -0.65
TOPBP1-209ENST00000513818 NCLP19338 710 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms