RNA–Protein interactions for RNA: ENST00000513450.1

RNF4-219, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 416 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-219ENST00000513450 ASGR2P07307 311 aa3.24□□□□□ -1.89
RNF4-219ENST00000513450 CDK11BP21127 795 aaKnown RBP3.24□□□□□ -1.89
RNF4-219ENST00000513450 FNTBP49356 437 aa3.24□□□□□ -1.89
RNF4-219ENST00000513450 KIF11P52732 1056 aa3.24□□□□□ -1.89
RNF4-219ENST00000513450 NKX3-2P78367 333 aa3.24□□□□□ -1.89
RNF4-219ENST00000513450 FAPQ12884 760 aa3.24□□□□□ -1.89
RNF4-219ENST00000513450 STAT4Q14765 748 aa3.24□□□□□ -1.89
RNF4-219ENST00000513450 MLANAQ16655 118 aa3.24□□□□□ -1.89
RNF4-219ENST00000513450 GPR158Q5T848 1215 aa3.24□□□□□ -1.89
RNF4-219ENST00000513450 CPZQ66K79 652 aa3.24□□□□□ -1.89
RNF4-219ENST00000513450 TMEM132EQ6IEE7 984 aa3.24□□□□□ -1.89
RNF4-219ENST00000513450 TEPPQ6URK8 271 aa3.24□□□□□ -1.89
RNF4-219ENST00000513450 NECAB2Q7Z6G3 386 aa3.24□□□□□ -1.89
RNF4-219ENST00000513450 NME9Q86XW9 330 aa3.24□□□□□ -1.89
RNF4-219ENST00000513450 SPATS2Q86XZ4 545 aaKnown RBP3.24□□□□□ -1.89
RNF4-219ENST00000513450 RBM12BQ8IXT5 1001 aaKnown RBP3.24□□□□□ -1.89
RNF4-219ENST00000513450 ZZZ3Q8IYH5 903 aa3.24□□□□□ -1.89
RNF4-219ENST00000513450 KIAA1958Q8N8K9 716 aa3.24□□□□□ -1.89
RNF4-219ENST00000513450 PRPF38AQ8NAV1 312 aaKnown RBP3.24□□□□□ -1.89
RNF4-219ENST00000513450 GPR101Q96P66 508 aaPredicted RBP3.24□□□□□ -1.89
RNF4-219ENST00000513450 FAM126AQ9BYI3 521 aaPredicted RBP3.24□□□□□ -1.89
RNF4-219ENST00000513450 MCOLN1Q9GZU1 580 aa3.24□□□□□ -1.89
RNF4-219ENST00000513450 CNTD2Q9H8S5 307 aa3.24□□□□□ -1.89
RNF4-219ENST00000513450 TYW1Q9NV66 732 aaKnown RBP3.24□□□□□ -1.89
RNF4-219ENST00000513450 PCDHA5Q9Y5H7 936 aa3.24□□□□□ -1.89
RNF4-219ENST00000513450 PHLDB1Q86UU1 1377 aa3.24□□□□□ -1.89
RNF4-219ENST00000513450 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.23□□□□□ -1.89
RNF4-219ENST00000513450 PRAMEF25A6NGN4 478 aa3.23□□□□□ -1.89
RNF4-219ENST00000513450 ACOT7O00154 380 aa3.23□□□□□ -1.89
RNF4-219ENST00000513450 FOXP2O15409 715 aa3.23□□□□□ -1.89
RNF4-219ENST00000513450 SLC9A1P19634 815 aa3.23□□□□□ -1.89
RNF4-219ENST00000513450 CDKN1CP49918 316 aaPredicted RBP3.23□□□□□ -1.89
RNF4-219ENST00000513450 CDR1P51861 262 aa3.23□□□□□ -1.89
RNF4-219ENST00000513450 PHC1P78364 1004 aa3.23□□□□□ -1.89
RNF4-219ENST00000513450 SMAD3P84022 425 aaKnown RBP3.23□□□□□ -1.89
RNF4-219ENST00000513450 GRIN1Q05586 938 aa3.23□□□□□ -1.89
RNF4-219ENST00000513450 ADCY1Q08828 1119 aa3.23□□□□□ -1.89
RNF4-219ENST00000513450 DBPQ10586 325 aaPredicted RBP3.23□□□□□ -1.89
RNF4-219ENST00000513450 LRRC32Q14392 662 aa3.23□□□□□ -1.89
RNF4-219ENST00000513450 TMEM132BQ14DG7 1078 aa3.23□□□□□ -1.89
RNF4-219ENST00000513450 SEC23AQ15436 765 aa3.23□□□□□ -1.89
RNF4-219ENST00000513450 SMAD2Q15796 467 aaKnown RBP3.23□□□□□ -1.89
RNF4-219ENST00000513450 CR1LQ2VPA4 569 aa3.23□□□□□ -1.89
RNF4-219ENST00000513450 ATP13A4Q4VNC1 1196 aa3.23□□□□□ -1.89
RNF4-219ENST00000513450 FSTL4Q6MZW2 842 aa3.23□□□□□ -1.89
RNF4-219ENST00000513450 CD300LDQ6UXZ3 194 aa3.23□□□□□ -1.89
RNF4-219ENST00000513450 B3GNT8Q7Z7M8 397 aa3.23□□□□□ -1.89
RNF4-219ENST00000513450 RPUSD2Q8IZ73 545 aaKnown RBP3.23□□□□□ -1.89
RNF4-219ENST00000513450 MZB1Q8WU39 189 aa3.23□□□□□ -1.89
RNF4-219ENST00000513450 E2F7Q96AV8 911 aa3.23□□□□□ -1.89
RNF4-219ENST00000513450 ELF4Q99607 663 aaPredicted RBP3.23□□□□□ -1.89
RNF4-219ENST00000513450 KRTAP4-11Q9BYQ6 195 aa3.23□□□□□ -1.89
RNF4-219ENST00000513450 BCAS3Q9H6U6 928 aa3.23□□□□□ -1.89
RNF4-219ENST00000513450 EMC7Q9NPA0 242 aa3.23□□□□□ -1.89
RNF4-219ENST00000513450 SPTLC3Q9NUV7 552 aa3.23□□□□□ -1.89
RNF4-219ENST00000513450 FAN1Q9Y2M0 1017 aa3.23□□□□□ -1.89
RNF4-219ENST00000513450 ASB1Q9Y576 335 aa3.23□□□□□ -1.89
RNF4-219ENST00000513450 PPM1GO15355 546 aaPredicted RBP3.22□□□□□ -1.89
RNF4-219ENST00000513450 TGM5O43548 720 aa3.22□□□□□ -1.89
RNF4-219ENST00000513450 C8BP07358 591 aa3.22□□□□□ -1.89
RNF4-219ENST00000513450 ENO2P09104 434 aaPredicted RBP3.22□□□□□ -1.89
RNF4-219ENST00000513450 HMGB1P09429 215 aaKnown RBP3.22□□□□□ -1.89
RNF4-219ENST00000513450 CYP2C8P10632 490 aa3.22□□□□□ -1.89
RNF4-219ENST00000513450 GLDCP23378 1020 aa3.22□□□□□ -1.89
RNF4-219ENST00000513450 IGFBP6P24592 240 aaPredicted RBP3.22□□□□□ -1.89
RNF4-219ENST00000513450 CD40P25942 277 aa3.22□□□□□ -1.89
RNF4-219ENST00000513450 AOAHP28039 575 aa3.22□□□□□ -1.89
RNF4-219ENST00000513450 LSP1P33241 339 aa3.22□□□□□ -1.89
RNF4-219ENST00000513450 STAT5AP42229 794 aa3.22□□□□□ -1.89
RNF4-219ENST00000513450 ID4P47928 161 aa3.22□□□□□ -1.89
RNF4-219ENST00000513450 SESN3P58005 492 aa3.22□□□□□ -1.89
RNF4-219ENST00000513450 DLG4P78352 724 aa3.22□□□□□ -1.89
RNF4-219ENST00000513450 TMPRSS15P98073 1019 aa3.22□□□□□ -1.89
RNF4-219ENST00000513450 EPHA7Q15375 998 aa3.22□□□□□ -1.89
RNF4-219ENST00000513450 TERF2Q15554 542 aa3.22□□□□□ -1.89
RNF4-219ENST00000513450 DDB1Q16531 1140 aa3.22□□□□□ -1.89
RNF4-219ENST00000513450 RGL3Q3MIN7 710 aa3.22□□□□□ -1.89
RNF4-219ENST00000513450 CATSPEREQ5SY80 951 aa3.22□□□□□ -1.89
RNF4-219ENST00000513450 CD276Q5ZPR3 534 aa3.22□□□□□ -1.89
RNF4-219ENST00000513450 VASNQ6EMK4 673 aa3.22□□□□□ -1.89
RNF4-219ENST00000513450 PROSER1Q86XN7 944 aa3.22□□□□□ -1.89
RNF4-219ENST00000513450 IGDCC3Q8IVU1 814 aa3.22□□□□□ -1.89
RNF4-219ENST00000513450 ZNF610Q8N9Z0 462 aa3.22□□□□□ -1.89
RNF4-219ENST00000513450 SMARCC2Q8TAQ2 1214 aa3.22□□□□□ -1.89
RNF4-219ENST00000513450 ASB15Q8WXK1 588 aa3.22□□□□□ -1.89
RNF4-219ENST00000513450 SLC5A5Q92911 643 aa3.22□□□□□ -1.89
RNF4-219ENST00000513450 KCNN1Q92952 543 aa3.22□□□□□ -1.89
RNF4-219ENST00000513450 FAM84AQ96KN4 292 aa3.22□□□□□ -1.89
RNF4-219ENST00000513450 C16orf92Q96LL3 132 aa3.22□□□□□ -1.89
RNF4-219ENST00000513450 GBP4Q96PP9 640 aa3.22□□□□□ -1.89
RNF4-219ENST00000513450 TMEM209Q96SK2 561 aa3.22□□□□□ -1.89
RNF4-219ENST00000513450 PUS7LQ9H0K6 701 aaKnown RBP3.22□□□□□ -1.89
RNF4-219ENST00000513450 GCM1Q9NP62 436 aa3.22□□□□□ -1.89
RNF4-219ENST00000513450 TOMM22Q9NS69 142 aa3.22□□□□□ -1.89
RNF4-219ENST00000513450 HOMER2Q9NSB8 354 aa3.22□□□□□ -1.89
RNF4-219ENST00000513450 SLC5A4Q9NY91 659 aa3.22□□□□□ -1.89
RNF4-219ENST00000513450 H2AFY2Q9P0M6 372 aaPredicted RBP3.22□□□□□ -1.89
RNF4-219ENST00000513450 USP36Q9P275 1121 aaKnown RBP3.22□□□□□ -1.89
RNF4-219ENST00000513450 PLA2G2DQ9UNK4 145 aa3.22□□□□□ -1.89
RNF4-219ENST00000513450 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms