RNA–Protein interactions for RNA: ENST00000512805.5

RACK1-227, Transcript of receptor for activated C kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RACK1, Length 1,403 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-227ENST00000512805 NRIP1P48552 1158 aa12.19□□□□□ -0.46
RACK1-227ENST00000512805 SCRN1Q12765 414 aa12.19□□□□□ -0.46
RACK1-227ENST00000512805 CUL4AQ13619 759 aa12.19□□□□□ -0.46
RACK1-227ENST00000512805 WTAPQ15007 396 aa12.19□□□□□ -0.46
RACK1-227ENST00000512805 TRIM71Q2Q1W2 868 aaKnown RBP12.19□□□□□ -0.46
RACK1-227ENST00000512805 PLEKHG4Q58EX7 1191 aa12.19□□□□□ -0.46
RACK1-227ENST00000512805 BRDTQ58F21 947 aaPredicted RBP12.19□□□□□ -0.46
RACK1-227ENST00000512805 EEPD1Q7L9B9 569 aa12.19□□□□□ -0.46
RACK1-227ENST00000512805 LRRC47Q8N1G4 583 aaKnown RBP12.19□□□□□ -0.46
RACK1-227ENST00000512805 PRPF38AQ8NAV1 312 aaKnown RBP12.19□□□□□ -0.46
RACK1-227ENST00000512805 UBAC1Q9BSL1 405 aa12.19□□□□□ -0.46
RACK1-227ENST00000512805 ZNF287Q9HBT7 754 aa12.19□□□□□ -0.46
RACK1-227ENST00000512805 NR2E1Q9Y466 385 aa12.19□□□□□ -0.46
RACK1-227ENST00000512805 DDX49Q9Y6V7 483 aaKnown RBP12.19□□□□□ -0.46
RACK1-227ENST00000512805 EMSYQ7Z589 1322 aa12.18□□□□□ -0.46
RACK1-227ENST00000512805 RBM47A0AV96 593 aaKnown RBP12.18□□□□□ -0.46
RACK1-227ENST00000512805 OAZ1P54368 228 aa12.18□□□□□ -0.46
RACK1-227ENST00000512805 STK3Q13188 491 aa12.18□□□□□ -0.46
RACK1-227ENST00000512805 VARS2Q5ST30 1063 aaKnown RBP12.18□□□□□ -0.46
RACK1-227ENST00000512805 ZNF618Q5T7W0 954 aa12.18□□□□□ -0.46
RACK1-227ENST00000512805 IQCA1Q86XH1 822 aa12.18□□□□□ -0.46
RACK1-227ENST00000512805 ZNF654Q8IZM8 581 aa12.18□□□□□ -0.46
RACK1-227ENST00000512805 P2RX5Q93086 422 aa12.18□□□□□ -0.46
RACK1-227ENST00000512805 MKL1Q969V6 931 aa12.18□□□□□ -0.46
RACK1-227ENST00000512805 CHMP4CQ96CF2 233 aa12.18□□□□□ -0.46
RACK1-227ENST00000512805 ZNF274Q96GC6 653 aaPredicted RBP12.18□□□□□ -0.46
RACK1-227ENST00000512805 BORCS6Q96GS4 357 aa12.18□□□□□ -0.46
RACK1-227ENST00000512805 WDR11Q9BZH6 1224 aa12.18□□□□□ -0.46
RACK1-227ENST00000512805 SLC38A10Q9HBR0 1119 aa12.18□□□□□ -0.46
RACK1-227ENST00000512805 RAVER2Q9HCJ3 691 aaKnown RBP12.18□□□□□ -0.46
RACK1-227ENST00000512805 A1CFQ9NQ94 594 aaKnown RBP12.18□□□□□ -0.46
RACK1-227ENST00000512805 NYAP2Q9P242 653 aa12.18□□□□□ -0.46
RACK1-227ENST00000512805 CLIP2Q9UDT6 1046 aa12.18□□□□□ -0.46
RACK1-227ENST00000512805 STX8Q9UNK0 236 aa12.18□□□□□ -0.46
RACK1-227ENST00000512805 CNOT1A5YKK6 2376 aaKnown RBP12.18□□□□□ -0.46
RACK1-227ENST00000512805 NID2Q14112 1375 aa12.17□□□□□ -0.46
RACK1-227ENST00000512805 BPTFQ12830 3046 aa12.17□□□□□ -0.46
RACK1-227ENST00000512805 ZBED4O75132 1171 aa12.17□□□□□ -0.46
RACK1-227ENST00000512805 PPFIA3O75145 1194 aa12.17□□□□□ -0.46
RACK1-227ENST00000512805 UPP2O95045 317 aa12.17□□□□□ -0.46
RACK1-227ENST00000512805 TGM1P22735 817 aa12.17□□□□□ -0.46
RACK1-227ENST00000512805 ADD1P35611 737 aaKnown RBP12.17□□□□□ -0.46
RACK1-227ENST00000512805 NT5C2P49902 561 aa12.17□□□□□ -0.46
RACK1-227ENST00000512805 CCT2P78371 535 aaKnown RBP12.17□□□□□ -0.46
RACK1-227ENST00000512805 ZNF200P98182 395 aaPredicted RBP12.17□□□□□ -0.46
RACK1-227ENST00000512805 FUT2Q10981 343 aa12.17□□□□□ -0.46
RACK1-227ENST00000512805 NTRK3Q16288 839 aa12.17□□□□□ -0.46
RACK1-227ENST00000512805 IFIT1BQ5T764 474 aaKnown RBP12.17□□□□□ -0.46
RACK1-227ENST00000512805 STAG2Q8N3U4 1231 aa12.17□□□□□ -0.46
RACK1-227ENST00000512805 OR6J1Q8NGC5 347 aa12.17□□□□□ -0.46
RACK1-227ENST00000512805 GTF3C6Q969F1 213 aa12.17□□□□□ -0.46
RACK1-227ENST00000512805 KANSL2Q9H9L4 492 aa12.17□□□□□ -0.46
RACK1-227ENST00000512805 GOPCQ9HD26 462 aa12.17□□□□□ -0.46
RACK1-227ENST00000512805 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.16□□□□□ -0.46
RACK1-227ENST00000512805 GOLGA8BA8MQT2 603 aa12.16□□□□□ -0.46
RACK1-227ENST00000512805 TTLL1O95922 423 aa12.16□□□□□ -0.46
RACK1-227ENST00000512805 SP9P0CG40 484 aa12.16□□□□□ -0.46
RACK1-227ENST00000512805 SNHG28P0DPA3 235 aa12.16□□□□□ -0.46
RACK1-227ENST00000512805 TOP1P11387 765 aaKnown RBP12.16□□□□□ -0.46
RACK1-227ENST00000512805 ANP32AP39687 249 aaKnown RBP12.16□□□□□ -0.46
RACK1-227ENST00000512805 ANKRD1Q15327 319 aa12.16□□□□□ -0.46
RACK1-227ENST00000512805 TMEM184AQ6ZMB5 413 aa12.16□□□□□ -0.46
RACK1-227ENST00000512805 MICU3Q86XE3 530 aa12.16□□□□□ -0.46
RACK1-227ENST00000512805 CCDC83Q8IWF9 413 aa12.16□□□□□ -0.46
RACK1-227ENST00000512805 CMTR1Q8N1G2 835 aaKnown RBP12.16□□□□□ -0.46
RACK1-227ENST00000512805 PNMA1Q8ND90 353 aa12.16□□□□□ -0.46
RACK1-227ENST00000512805 VN1R2Q8NFZ6 395 aa12.16□□□□□ -0.46
RACK1-227ENST00000512805 SPPL3Q8TCT6 385 aa12.16□□□□□ -0.46
RACK1-227ENST00000512805 IFIH1Q9BYX4 1025 aaKnown RBP12.16□□□□□ -0.46
RACK1-227ENST00000512805 CPVLQ9H3G5 476 aa12.16□□□□□ -0.46
RACK1-227ENST00000512805 FOXD4L1Q9NU39 408 aa12.16□□□□□ -0.46
RACK1-227ENST00000512805 NCDNQ9UBB6 729 aa12.16□□□□□ -0.46
RACK1-227ENST00000512805 DACH1Q9UI36 760 aa12.16□□□□□ -0.46
RACK1-227ENST00000512805 ZMIZ1Q9ULJ6 1067 aa12.16□□□□□ -0.46
RACK1-227ENST00000512805 C2CD4DB7Z1M9 353 aa12.15□□□□□ -0.46
RACK1-227ENST00000512805 JAK2O60674 1132 aa12.15□□□□□ -0.46
RACK1-227ENST00000512805 CSPG5O95196 566 aa12.15□□□□□ -0.46
RACK1-227ENST00000512805 PLEKHA8P1O95397 391 aa12.15□□□□□ -0.46
RACK1-227ENST00000512805 SP100P23497 879 aaPredicted RBP12.15□□□□□ -0.46
RACK1-227ENST00000512805 DDIT3P35638 169 aa12.15□□□□□ -0.46
RACK1-227ENST00000512805 PTK7Q13308 1070 aa12.15□□□□□ -0.46
RACK1-227ENST00000512805 NAALADL2Q58DX5 795 aa12.15□□□□□ -0.46
RACK1-227ENST00000512805 NFXL1Q6ZNB6 911 aa12.15□□□□□ -0.46
RACK1-227ENST00000512805 RBM23Q86U06 439 aaKnown RBP12.15□□□□□ -0.46
RACK1-227ENST00000512805 HSCBQ8IWL3 235 aa12.15□□□□□ -0.46
RACK1-227ENST00000512805 SPRYD3Q8NCJ5 442 aa12.15□□□□□ -0.46
RACK1-227ENST00000512805 IPO9Q96P70 1041 aaKnown RBP12.15□□□□□ -0.46
RACK1-227ENST00000512805 ACAD9Q9H845 621 aa12.15□□□□□ -0.46
RACK1-227ENST00000512805 RC3H2Q9HBD1 1191 aaKnown RBP12.15□□□□□ -0.46
RACK1-227ENST00000512805 GTF2IRD1Q9UHL9 959 aa12.15□□□□□ -0.46
RACK1-227ENST00000512805 MAD2L2Q9UI95 211 aa12.15□□□□□ -0.46
RACK1-227ENST00000512805 SLC12A7Q9Y666 1083 aa12.15□□□□□ -0.46
RACK1-227ENST00000512805 FSD2A1L4K1 749 aa12.14□□□□□ -0.47
RACK1-227ENST00000512805 PALM3A6NDB9 673 aaPredicted RBP12.14□□□□□ -0.47
RACK1-227ENST00000512805 CCDC69A6NI79 296 aa12.14□□□□□ -0.47
RACK1-227ENST00000512805 SLC30A4O14863 429 aa12.14□□□□□ -0.47
RACK1-227ENST00000512805 NKRFO15226 690 aaKnown RBP eCLIP12.14□□□□□ -0.47
RACK1-227ENST00000512805 ZBTB43O43298 467 aa12.14□□□□□ -0.47
RACK1-227ENST00000512805 GOLGA8HP0CJ92 632 aa12.14□□□□□ -0.47
RACK1-227ENST00000512805 PDHBP11177 359 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms