RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 UBXN1Q04323 297 aa7.04□□□□□ -1.28
TRAPPC11-209ENST00000512476 MAP3K12Q12852 859 aa7.04□□□□□ -1.28
TRAPPC11-209ENST00000512476 KCNB1Q14721 858 aa7.04□□□□□ -1.28
TRAPPC11-209ENST00000512476 SF3B3Q15393 1217 aaKnown RBP7.04□□□□□ -1.28
TRAPPC11-209ENST00000512476 LMBR1LQ6UX01 489 aa7.04□□□□□ -1.28
TRAPPC11-209ENST00000512476 FKBP9P1Q75LS8 142 aa7.04□□□□□ -1.28
TRAPPC11-209ENST00000512476 ZNF438Q7Z4V0 828 aa7.04□□□□□ -1.28
TRAPPC11-209ENST00000512476 COLGALT2Q8IYK4 626 aa7.04□□□□□ -1.28
TRAPPC11-209ENST00000512476 OR6P1Q8NGX9 317 aa7.04□□□□□ -1.28
TRAPPC11-209ENST00000512476 B3GNT5Q9BYG0 378 aa7.04□□□□□ -1.28
TRAPPC11-209ENST00000512476 XAB2Q9HCS7 855 aaKnown RBP7.04□□□□□ -1.28
TRAPPC11-209ENST00000512476 PAPOLBQ9NRJ5 636 aaKnown RBP7.04□□□□□ -1.28
TRAPPC11-209ENST00000512476 APOBEC2Q9Y235 224 aaKnown RBP7.04□□□□□ -1.28
TRAPPC11-209ENST00000512476 TLL2Q9Y6L7 1015 aa7.04□□□□□ -1.28
TRAPPC11-209ENST00000512476 PPEF1O14829 653 aaPredicted RBP7.04□□□□□ -1.28
TRAPPC11-209ENST00000512476 BACH1O14867 736 aa7.04□□□□□ -1.28
TRAPPC11-209ENST00000512476 FYB1O15117 783 aa7.04□□□□□ -1.28
TRAPPC11-209ENST00000512476 ZBED4O75132 1171 aa7.04□□□□□ -1.28
TRAPPC11-209ENST00000512476 URI1O94763 535 aaPredicted RBP7.04□□□□□ -1.28
TRAPPC11-209ENST00000512476 KRT13P13646 458 aa7.04□□□□□ -1.28
TRAPPC11-209ENST00000512476 JUNDP17535 347 aa7.04□□□□□ -1.28
TRAPPC11-209ENST00000512476 TPD52P55327 224 aaPredicted RBP7.04□□□□□ -1.28
TRAPPC11-209ENST00000512476 SCAND1P57086 179 aa7.04□□□□□ -1.28
TRAPPC11-209ENST00000512476 TROQ12816 1431 aaPredicted RBP7.04□□□□□ -1.28
TRAPPC11-209ENST00000512476 MAP7Q14244 749 aa7.04□□□□□ -1.28
TRAPPC11-209ENST00000512476 TTC31Q49AM3 519 aaPredicted RBP7.04□□□□□ -1.28
TRAPPC11-209ENST00000512476 TTC16Q8NEE8 873 aa7.04□□□□□ -1.28
TRAPPC11-209ENST00000512476 HTRA1Q92743 480 aa7.04□□□□□ -1.28
TRAPPC11-209ENST00000512476 CNDP2Q96KP4 475 aaKnown RBP7.04□□□□□ -1.28
TRAPPC11-209ENST00000512476 AGAP3Q96P47 875 aa7.04□□□□□ -1.28
TRAPPC11-209ENST00000512476 LSM14BQ9BX40 385 aaKnown RBP7.04□□□□□ -1.28
TRAPPC11-209ENST00000512476 TMEM120AQ9BXJ8 343 aa7.04□□□□□ -1.28
TRAPPC11-209ENST00000512476 DZANK1Q9NVP4 752 aa7.04□□□□□ -1.28
TRAPPC11-209ENST00000512476 H2AFY2Q9P0M6 372 aaPredicted RBP7.04□□□□□ -1.28
TRAPPC11-209ENST00000512476 SH3BGRL2Q9UJC5 107 aa7.04□□□□□ -1.28
TRAPPC11-209ENST00000512476 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.04□□□□□ -1.28
TRAPPC11-209ENST00000512476 SOCS5O75159 536 aa7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 HNF4AP41235 474 aa7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 ITGA8P53708 1063 aa7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 SGCGQ13326 291 aa7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 SMAD2Q15796 467 aaKnown RBP7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 CLUL1Q15846 466 aa7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 ANKRD39Q53RE8 183 aa7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 PPFIBP1Q86W92 1011 aa7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 TMEM102Q8N9M5 508 aaPredicted RBP7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 SMC1BQ8NDV3 1235 aa7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 FERMT2Q96AC1 680 aa7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 ZNF845Q96IR2 970 aaPredicted RBP7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 SLC4A9Q96Q91 983 aa7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 GSX2Q9BZM3 304 aa7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 C11orf16Q9NQ32 467 aa7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 RBM28Q9NW13 759 aaKnown RBP7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 C6orf203Q9P0P8 240 aaPredicted RBP7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 EPS15L1Q9UBC2 864 aa7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 C19orf53Q9UNZ5 99 aaPredicted RBP7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 AGTPBP1Q9UPW5 1226 aa7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 TMEM98Q9Y2Y6 226 aa7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 ABCC2Q92887 1545 aa7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 MYCP01106 439 aaPredicted RBP7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 GNRH1P01148 92 aa7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 CSTBP04080 98 aaKnown RBP7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 MMEP08473 750 aa7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 HSPA5P11021 654 aaKnown RBP7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 PCP11498 1178 aaKnown RBP7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 ACAP1Q15027 740 aa7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 MUM1L1Q5H9M0 696 aa7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 ATAT1Q5SQI0 421 aa7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 TXNDC11Q6PKC3 985 aa7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 POTEAQ6S8J7 498 aa7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 RAPH1Q70E73 1250 aa7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 LRRTM4Q86VH4 590 aa7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 CREG2Q8IUH2 290 aa7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 CACNA2D3Q8IZS8 1091 aa7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 DCLK2Q8N568 766 aa7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 SPATA18Q8TC71 538 aa7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 BRSK1Q8TDC3 778 aa7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 BTN2A2Q8WVV5 523 aa7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 GPKOWQ92917 476 aaPredicted RBP eCLIP7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 ARHGEF2Q92974 986 aaKnown RBP7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 ACSF2Q96CM8 615 aaPredicted RBP7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 SLC2A13Q96QE2 648 aa7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 WDR24Q96S15 920 aa7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 NUP88Q99567 741 aaPredicted RBP7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 LRFN3Q9BTN0 628 aa7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 IRAK4Q9NWZ3 460 aa7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 CHCHD3Q9NX63 227 aaKnown RBP7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 DENND2AQ9ULE3 1009 aa7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 ADCY10Q96PN6 1610 aa7.03□□□□□ -1.28
TRAPPC11-209ENST00000512476 NPTXRO95502 500 aa7.02□□□□□ -1.29
TRAPPC11-209ENST00000512476 STARD3NLO95772 234 aa7.02□□□□□ -1.29
TRAPPC11-209ENST00000512476 IFI35P80217 286 aaPredicted RBP7.02□□□□□ -1.29
TRAPPC11-209ENST00000512476 LRRC74AQ0VAA2 488 aa7.02□□□□□ -1.29
TRAPPC11-209ENST00000512476 LRRC32Q14392 662 aa7.02□□□□□ -1.29
TRAPPC11-209ENST00000512476 TIGD6Q17RP2 521 aa7.02□□□□□ -1.29
TRAPPC11-209ENST00000512476 ZNF423Q2M1K9 1284 aa7.02□□□□□ -1.29
TRAPPC11-209ENST00000512476 ARL13BQ3SXY8 428 aa7.02□□□□□ -1.29
TRAPPC11-209ENST00000512476 ZNF527Q8NB42 609 aa7.02□□□□□ -1.29
TRAPPC11-209ENST00000512476 KCNG4Q8TDN1 519 aa7.02□□□□□ -1.29
TRAPPC11-209ENST00000512476 PI4K2AQ9BTU6 479 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms