RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 RGL1Q9NZL6 768 aa14.28□□□□□ -0.12
PCDHA4-202ENST00000512229 GFPT2O94808 682 aa14.28□□□□□ -0.12
PCDHA4-202ENST00000512229 SERPING1P05155 500 aa14.28□□□□□ -0.12
PCDHA4-202ENST00000512229 SFNP31947 248 aa14.28□□□□□ -0.12
PCDHA4-202ENST00000512229 MAP3K9P80192 1104 aa14.28□□□□□ -0.12
PCDHA4-202ENST00000512229 FMR1Q06787 632 aaKnown RBP eCLIP14.28□□□□□ -0.12
PCDHA4-202ENST00000512229 COG2Q14746 738 aa14.28□□□□□ -0.12
PCDHA4-202ENST00000512229 EPHA7Q15375 998 aa14.28□□□□□ -0.12
PCDHA4-202ENST00000512229 FAM76AQ8TAV0 307 aa14.28□□□□□ -0.12
PCDHA4-202ENST00000512229 ACAD9Q9H845 621 aa14.28□□□□□ -0.12
PCDHA4-202ENST00000512229 ABHD10Q9NUJ1 306 aa14.28□□□□□ -0.12
PCDHA4-202ENST00000512229 PEAK1Q9H792 1746 aa14.28□□□□□ -0.12
PCDHA4-202ENST00000512229 KRIT1O00522 736 aa14.28□□□□□ -0.12
PCDHA4-202ENST00000512229 TBX3O15119 743 aa14.28□□□□□ -0.12
PCDHA4-202ENST00000512229 ZEB2O60315 1214 aa14.28□□□□□ -0.12
PCDHA4-202ENST00000512229 TOB1P50616 345 aaPredicted RBP14.28□□□□□ -0.12
PCDHA4-202ENST00000512229 DPF2Q92785 391 aa14.28□□□□□ -0.12
PCDHA4-202ENST00000512229 GDAP1L1Q96MZ0 367 aa14.28□□□□□ -0.12
PCDHA4-202ENST00000512229 LXNQ9BS40 222 aa14.28□□□□□ -0.12
PCDHA4-202ENST00000512229 DEFB129Q9H1M3 183 aa14.28□□□□□ -0.12
PCDHA4-202ENST00000512229 SCAF8Q9UPN6 1271 aaKnown RBP14.28□□□□□ -0.12
PCDHA4-202ENST00000512229 PIK3CAP42336 1068 aa14.27□□□□□ -0.12
PCDHA4-202ENST00000512229 NSFP46459 744 aaKnown RBP14.27□□□□□ -0.12
PCDHA4-202ENST00000512229 PPP2R5EQ16537 467 aa14.27□□□□□ -0.12
PCDHA4-202ENST00000512229 ADSSL1Q8N142 457 aa14.27□□□□□ -0.12
PCDHA4-202ENST00000512229 GMPSP49915 693 aaPredicted RBP14.27□□□□□ -0.12
PCDHA4-202ENST00000512229 KCNH2Q12809 1159 aa14.27□□□□□ -0.12
PCDHA4-202ENST00000512229 MKRN3Q13064 507 aaKnown RBP14.27□□□□□ -0.12
PCDHA4-202ENST00000512229 DAGLBQ8NCG7 672 aa14.27□□□□□ -0.12
PCDHA4-202ENST00000512229 IPO4Q8TEX9 1081 aaKnown RBP14.27□□□□□ -0.12
PCDHA4-202ENST00000512229 OTUD5Q96G74 571 aa14.27□□□□□ -0.12
PCDHA4-202ENST00000512229 PLEKHA4Q9H4M7 779 aa14.27□□□□□ -0.12
PCDHA4-202ENST00000512229 UBE2TQ9NPD8 197 aaPredicted RBP14.27□□□□□ -0.12
PCDHA4-202ENST00000512229 TYW1Q9NV66 732 aaKnown RBP14.27□□□□□ -0.12
PCDHA4-202ENST00000512229 TTC26A0AVF1 554 aa14.27□□□□□ -0.13
PCDHA4-202ENST00000512229 RHOBTB3O94955 611 aa14.27□□□□□ -0.13
PCDHA4-202ENST00000512229 YARSP54577 528 aaKnown RBP14.27□□□□□ -0.13
PCDHA4-202ENST00000512229 LACTBP83111 547 aaPredicted RBP14.27□□□□□ -0.13
PCDHA4-202ENST00000512229 INTS8Q75QN2 995 aaKnown RBP14.27□□□□□ -0.13
PCDHA4-202ENST00000512229 IL17RAQ96F46 866 aa14.27□□□□□ -0.13
PCDHA4-202ENST00000512229 MMS19Q96T76 1030 aa14.27□□□□□ -0.13
PCDHA4-202ENST00000512229 IQCGQ9H095 443 aaKnown RBP14.27□□□□□ -0.13
PCDHA4-202ENST00000512229 AKT3Q9Y243 479 aa14.27□□□□□ -0.13
PCDHA4-202ENST00000512229 MED1Q15648 1581 aaPredicted RBP14.27□□□□□ -0.13
PCDHA4-202ENST00000512229 RIC1Q4ADV7 1423 aa14.27□□□□□ -0.13
PCDHA4-202ENST00000512229 GOLGA8IPA6NC78 632 aa14.26□□□□□ -0.13
PCDHA4-202ENST00000512229 GOLGA6BA6NDN3 693 aa14.26□□□□□ -0.13
PCDHA4-202ENST00000512229 GOLGA8JA6NMD2 632 aa14.26□□□□□ -0.13
PCDHA4-202ENST00000512229 EYA4O95677 639 aa14.26□□□□□ -0.13
PCDHA4-202ENST00000512229 GAS8O95995 478 aa14.26□□□□□ -0.13
PCDHA4-202ENST00000512229 RPS12P25398 132 aaKnown RBP14.26□□□□□ -0.13
PCDHA4-202ENST00000512229 CNGA1P29973 690 aa14.26□□□□□ -0.13
PCDHA4-202ENST00000512229 STK4Q13043 487 aa14.26□□□□□ -0.13
PCDHA4-202ENST00000512229 ANGEL2Q5VTE6 544 aaKnown RBP14.26□□□□□ -0.13
PCDHA4-202ENST00000512229 ANKRD40Q6AI12 368 aa14.26□□□□□ -0.13
PCDHA4-202ENST00000512229 SAMD7Q7Z3H4 446 aa14.26□□□□□ -0.13
PCDHA4-202ENST00000512229 MAIP1Q8WWC4 291 aa14.26□□□□□ -0.13
PCDHA4-202ENST00000512229 HPS3Q969F9 1004 aa14.26□□□□□ -0.13
PCDHA4-202ENST00000512229 C7orf25Q9BPX7 421 aa14.26□□□□□ -0.13
PCDHA4-202ENST00000512229 ALKBH5Q6P6C2 394 aaKnown RBP14.26□□□□□ -0.13
PCDHA4-202ENST00000512229 XXYLT1Q8NBI6 393 aa14.26□□□□□ -0.13
PCDHA4-202ENST00000512229 FAM217BQ9NTX9 383 aaPredicted RBP14.26□□□□□ -0.13
PCDHA4-202ENST00000512229 ZHX1Q9UKY1 873 aaPredicted RBP14.26□□□□□ -0.13
PCDHA4-202ENST00000512229 JRKLQ9Y4A0 524 aa14.26□□□□□ -0.13
PCDHA4-202ENST00000512229 MRC1P22897 1456 aa14.26□□□□□ -0.13
PCDHA4-202ENST00000512229 DDTLA6NHG4 134 aaPredicted RBP14.26□□□□□ -0.13
PCDHA4-202ENST00000512229 ZNF233A6NK53 670 aa14.26□□□□□ -0.13
PCDHA4-202ENST00000512229 PSMC5P62195 406 aa14.26□□□□□ -0.13
PCDHA4-202ENST00000512229 PKN1Q16512 942 aa14.26□□□□□ -0.13
PCDHA4-202ENST00000512229 NBPF11Q86T75 865 aa14.26□□□□□ -0.13
PCDHA4-202ENST00000512229 ZNF354CQ86Y25 554 aa14.26□□□□□ -0.13
PCDHA4-202ENST00000512229 ZNF280CQ8ND82 737 aa14.26□□□□□ -0.13
PCDHA4-202ENST00000512229 TEX13BQ9BXU2 312 aa14.26□□□□□ -0.13
PCDHA4-202ENST00000512229 EHD4Q9H223 541 aa14.26□□□□□ -0.13
PCDHA4-202ENST00000512229 MYO1FO00160 1098 aa14.26□□□□□ -0.13
PCDHA4-202ENST00000512229 SRGAP2CP0DJJ0 459 aa14.26□□□□□ -0.13
PCDHA4-202ENST00000512229 ATP2A2P16615 1042 aaKnown RBP14.26□□□□□ -0.13
PCDHA4-202ENST00000512229 POLR2BP30876 1174 aaKnown RBP14.26□□□□□ -0.13
PCDHA4-202ENST00000512229 ELOA2Q8IYF1 753 aaPredicted RBP14.26□□□□□ -0.13
PCDHA4-202ENST00000512229 RBM46Q8TBY0 533 aaKnown RBP14.26□□□□□ -0.13
PCDHA4-202ENST00000512229 FAM81BQ96LP2 452 aa14.26□□□□□ -0.13
PCDHA4-202ENST00000512229 PAIP2Q9BPZ3 127 aaKnown RBP14.26□□□□□ -0.13
PCDHA4-202ENST00000512229 RAB17Q9H0T7 212 aa14.26□□□□□ -0.13
PCDHA4-202ENST00000512229 IL17RBQ9NRM6 502 aa14.26□□□□□ -0.13
PCDHA4-202ENST00000512229 GABBR1Q9UBS5 961 aa14.25□□□□□ -0.13
PCDHA4-202ENST00000512229 HPSEQ9Y251 543 aa14.25□□□□□ -0.13
PCDHA4-202ENST00000512229 PCDHA13Q9Y5I0 950 aa14.25□□□□□ -0.13
PCDHA4-202ENST00000512229 RGPD8O14715 1765 aaPredicted RBP14.25□□□□□ -0.13
PCDHA4-202ENST00000512229 XRN1Q8IZH2 1706 aaKnown RBP14.25□□□□□ -0.13
PCDHA4-202ENST00000512229 MARK3P27448 753 aa14.25□□□□□ -0.13
PCDHA4-202ENST00000512229 PRAMEF18Q5VWM3 479 aa14.25□□□□□ -0.13
PCDHA4-202ENST00000512229 SWSAP1Q6NVH7 229 aa14.25□□□□□ -0.13
PCDHA4-202ENST00000512229 SELENOSQ9BQE4 189 aa14.25□□□□□ -0.13
PCDHA4-202ENST00000512229 PCDHA10Q9Y5I2 948 aa14.25□□□□□ -0.13
PCDHA4-202ENST00000512229 A0A1W2PQC6 194 aa14.25□□□□□ -0.13
PCDHA4-202ENST00000512229 SPDYE2BA6NHP3 402 aa14.25□□□□□ -0.13
PCDHA4-202ENST00000512229 C19orf81C9J6K1 198 aa14.25□□□□□ -0.13
PCDHA4-202ENST00000512229 SPDYE6P0CI01 402 aa14.25□□□□□ -0.13
PCDHA4-202ENST00000512229 TFAMQ00059 246 aaKnown RBP14.25□□□□□ -0.13
PCDHA4-202ENST00000512229 BAATQ14032 418 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms