RNA–Protein interactions for RNA: ENST00000510951.5

NR1I3-227, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 774 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-227ENST00000510951 PCDHA12Q9UN75 941 aa11.72□□□□□ -0.53
NR1I3-227ENST00000510951 ATP11BQ9Y2G3 1177 aa11.72□□□□□ -0.53
NR1I3-227ENST00000510951 PCDHA10Q9Y5I2 948 aa11.72□□□□□ -0.53
NR1I3-227ENST00000510951 GRIN2DO15399 1336 aa11.71□□□□□ -0.53
NR1I3-227ENST00000510951 IGSF9BQ9UPX0 1349 aa11.71□□□□□ -0.53
NR1I3-227ENST00000510951 H3BRB1 525 aa11.71□□□□□ -0.53
NR1I3-227ENST00000510951 PQBP1O60828 265 aaKnown RBP11.71□□□□□ -0.53
NR1I3-227ENST00000510951 LGR5O75473 907 aa11.71□□□□□ -0.53
NR1I3-227ENST00000510951 ATG7O95352 703 aa11.71□□□□□ -0.53
NR1I3-227ENST00000510951 SFNP31947 248 aa11.71□□□□□ -0.53
NR1I3-227ENST00000510951 DDIT3P35638 169 aa11.71□□□□□ -0.53
NR1I3-227ENST00000510951 STAT5BP51692 787 aa11.71□□□□□ -0.53
NR1I3-227ENST00000510951 RTP1P59025 263 aa11.71□□□□□ -0.53
NR1I3-227ENST00000510951 CYP4A11Q02928 519 aa11.71□□□□□ -0.53
NR1I3-227ENST00000510951 TMEM266Q2M3C6 531 aa11.71□□□□□ -0.53
NR1I3-227ENST00000510951 FAM160B1Q5W0V3 765 aa11.71□□□□□ -0.53
NR1I3-227ENST00000510951 PDXDC2PQ6P474 469 aa11.71□□□□□ -0.53
NR1I3-227ENST00000510951 B3GNT9Q6UX72 402 aa11.71□□□□□ -0.53
NR1I3-227ENST00000510951 SLC39A5Q6ZMH5 540 aa11.71□□□□□ -0.53
NR1I3-227ENST00000510951 CKAP2LQ8IYA6 745 aa11.71□□□□□ -0.53
NR1I3-227ENST00000510951 SMARCAD1Q9H4L7 1026 aa11.71□□□□□ -0.53
NR1I3-227ENST00000510951 TUT1Q9H6E5 874 aaKnown RBP11.71□□□□□ -0.53
NR1I3-227ENST00000510951 ERAP1Q9NZ08 941 aa11.71□□□□□ -0.53
NR1I3-227ENST00000510951 CEP131Q9UPN4 1083 aa11.71□□□□□ -0.53
NR1I3-227ENST00000510951 TRPC6Q9Y210 931 aa11.71□□□□□ -0.53
NR1I3-227ENST00000510951 TANC1Q9C0D5 1861 aa11.71□□□□□ -0.53
NR1I3-227ENST00000510951 LTBP2Q14767 1821 aa11.7□□□□□ -0.54
NR1I3-227ENST00000510951 IGKV6D-21A0A0A0MT36 114 aa11.7□□□□□ -0.54
NR1I3-227ENST00000510951 VWA3AA6NCI4 1184 aa11.7□□□□□ -0.54
NR1I3-227ENST00000510951 ARVCFO00192 962 aa11.7□□□□□ -0.54
NR1I3-227ENST00000510951 HAS3O00219 553 aa11.7□□□□□ -0.54
NR1I3-227ENST00000510951 LAD1O00515 517 aa11.7□□□□□ -0.54
NR1I3-227ENST00000510951 SMIM10L2AP0DMW4 78 aa11.7□□□□□ -0.54
NR1I3-227ENST00000510951 SMIM10L2BP0DMW5 78 aa11.7□□□□□ -0.54
NR1I3-227ENST00000510951 NCLP19338 710 aaKnown RBP11.7□□□□□ -0.54
NR1I3-227ENST00000510951 MARCKSP29966 332 aaPredicted RBP11.7□□□□□ -0.54
NR1I3-227ENST00000510951 DNM1Q05193 864 aaKnown RBP11.7□□□□□ -0.54
NR1I3-227ENST00000510951 IL17AQ16552 155 aa11.7□□□□□ -0.54
NR1I3-227ENST00000510951 C7orf31Q8N865 590 aa11.7□□□□□ -0.54
NR1I3-227ENST00000510951 RDM1Q8NG50 284 aa11.7□□□□□ -0.54
NR1I3-227ENST00000510951 DYDC2Q96IM9 177 aa11.7□□□□□ -0.54
NR1I3-227ENST00000510951 ZNF396Q96N95 335 aaPredicted RBP11.7□□□□□ -0.54
NR1I3-227ENST00000510951 RNPEPQ9H4A4 650 aa11.7□□□□□ -0.54
NR1I3-227ENST00000510951 PCDH10Q9P2E7 1040 aa11.7□□□□□ -0.54
NR1I3-227ENST00000510951 TFIP11Q9UBB9 837 aaKnown RBP11.7□□□□□ -0.54
NR1I3-227ENST00000510951 HDAC6Q9UBN7 1215 aa11.7□□□□□ -0.54
NR1I3-227ENST00000510951 SIP14410 1827 aa11.7□□□□□ -0.54
NR1I3-227ENST00000510951 PDE4DIPQ5VU43 2346 aa11.69□□□□□ -0.54
NR1I3-227ENST00000510951 PP2D1A8MPX8 630 aa11.69□□□□□ -0.54
NR1I3-227ENST00000510951 BMP15O95972 392 aa11.69□□□□□ -0.54
NR1I3-227ENST00000510951 PRPHP41219 470 aa11.69□□□□□ -0.54
NR1I3-227ENST00000510951 FXR2P51116 673 aaKnown RBP eCLIP11.69□□□□□ -0.54
NR1I3-227ENST00000510951 IGBP1P78318 339 aa11.69□□□□□ -0.54
NR1I3-227ENST00000510951 NUCB2P80303 420 aa11.69□□□□□ -0.54
NR1I3-227ENST00000510951 PRKCEQ02156 737 aa11.69□□□□□ -0.54
NR1I3-227ENST00000510951 C1QBPQ07021 282 aaKnown RBP11.69□□□□□ -0.54
NR1I3-227ENST00000510951 CTTNQ14247 550 aaKnown RBP11.69□□□□□ -0.54
NR1I3-227ENST00000510951 SNX17Q15036 470 aa11.69□□□□□ -0.54
NR1I3-227ENST00000510951 PLCB4Q15147 1175 aa11.69□□□□□ -0.54
NR1I3-227ENST00000510951 STK38Q15208 465 aa11.69□□□□□ -0.54
NR1I3-227ENST00000510951 PTPAQ15257 358 aa11.69□□□□□ -0.54
NR1I3-227ENST00000510951 DTHD1Q6ZMT9 781 aa11.69□□□□□ -0.54
NR1I3-227ENST00000510951 C7orf61Q8IZ16 206 aa11.69□□□□□ -0.54
NR1I3-227ENST00000510951 AFAP1L1Q8TED9 768 aa11.69□□□□□ -0.54
NR1I3-227ENST00000510951 ATP6V0A1Q93050 837 aa11.69□□□□□ -0.54
NR1I3-227ENST00000510951 IPO9Q96P70 1041 aaKnown RBP11.69□□□□□ -0.54
NR1I3-227ENST00000510951 EIF2AK1Q9BQI3 630 aaKnown RBP11.69□□□□□ -0.54
NR1I3-227ENST00000510951 LXNQ9BS40 222 aa11.69□□□□□ -0.54
NR1I3-227ENST00000510951 HTATIP2Q9BUP3 242 aa11.69□□□□□ -0.54
NR1I3-227ENST00000510951 TRMT13Q9NUP7 481 aaKnown RBP11.69□□□□□ -0.54
NR1I3-227ENST00000510951 RGL1Q9NZL6 768 aa11.69□□□□□ -0.54
NR1I3-227ENST00000510951 SCN5AQ14524 2016 aa11.69□□□□□ -0.54
NR1I3-227ENST00000510951 POTEB3A0JP26 581 aa11.68□□□□□ -0.54
NR1I3-227ENST00000510951 TMEM150BA6NC51 233 aa11.68□□□□□ -0.54
NR1I3-227ENST00000510951 ZNF862O60290 1169 aa11.68□□□□□ -0.54
NR1I3-227ENST00000510951 B4GALT4O60513 344 aa11.68□□□□□ -0.54
NR1I3-227ENST00000510951 OATP04181 439 aa11.68□□□□□ -0.54
NR1I3-227ENST00000510951 ATP4AP20648 1035 aa11.68□□□□□ -0.54
NR1I3-227ENST00000510951 CDC25AP30304 524 aa11.68□□□□□ -0.54
NR1I3-227ENST00000510951 NASPP49321 788 aaPredicted RBP11.68□□□□□ -0.54
NR1I3-227ENST00000510951 PSMC5P62195 406 aa11.68□□□□□ -0.54
NR1I3-227ENST00000510951 ZNF200P98182 395 aaPredicted RBP11.68□□□□□ -0.54
NR1I3-227ENST00000510951 TLE2Q04725 743 aa11.68□□□□□ -0.54
NR1I3-227ENST00000510951 GRIN1Q05586 938 aa11.68□□□□□ -0.54
NR1I3-227ENST00000510951 PPFIA1Q13136 1202 aa11.68□□□□□ -0.54
NR1I3-227ENST00000510951 HIC1Q14526 733 aa11.68□□□□□ -0.54
NR1I3-227ENST00000510951 EPHA7Q15375 998 aa11.68□□□□□ -0.54
NR1I3-227ENST00000510951 GRIK4Q16099 956 aa11.68□□□□□ -0.54
NR1I3-227ENST00000510951 GDF6Q6KF10 455 aaPredicted RBP11.68□□□□□ -0.54
NR1I3-227ENST00000510951 NFRKBQ6P4R8 1299 aa11.68□□□□□ -0.54
NR1I3-227ENST00000510951 POTEBQ6S5H4 581 aa11.68□□□□□ -0.54
NR1I3-227ENST00000510951 PLPPR4Q7Z2D5 763 aa11.68□□□□□ -0.54
NR1I3-227ENST00000510951 FAM126BQ8IXS8 530 aa11.68□□□□□ -0.54
NR1I3-227ENST00000510951 SLC43A3Q8NBI5 491 aa11.68□□□□□ -0.54
NR1I3-227ENST00000510951 TRAPPC12Q8WVT3 735 aa11.68□□□□□ -0.54
NR1I3-227ENST00000510951 ZBTB10Q96DT7 871 aa11.68□□□□□ -0.54
NR1I3-227ENST00000510951 RAB34Q9BZG1 259 aa11.68□□□□□ -0.54
NR1I3-227ENST00000510951 TRPV6Q9H1D0 765 aa11.68□□□□□ -0.54
NR1I3-227ENST00000510951 PRDM5Q9NQX1 630 aaPredicted RBP11.68□□□□□ -0.54
NR1I3-227ENST00000510951 SETD4Q9NVD3 440 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms