RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 IGFBP4P22692 258 aa26.14■■□□□ 1.78
SNF8-209ENST00000510558 TAF2Q6P1X5 1199 aa26.14■■□□□ 1.78
SNF8-209ENST00000510558 TRIM22Q8IYM9 498 aa26.14■■□□□ 1.78
SNF8-209ENST00000510558 ZBED2Q9BTP6 218 aa26.14■■□□□ 1.78
SNF8-209ENST00000510558 OSBPL7Q9BZF2 842 aa26.14■■□□□ 1.78
SNF8-209ENST00000510558 CHD7Q9P2D1 2997 aa26.13■■□□□ 1.77
SNF8-209ENST00000510558 MBLAC1A4D2B0 266 aaPredicted RBP26.13■■□□□ 1.77
SNF8-209ENST00000510558 DDX39AO00148 427 aaKnown RBP26.13■■□□□ 1.77
SNF8-209ENST00000510558 DLL1O00548 723 aa26.13■■□□□ 1.77
SNF8-209ENST00000510558 CPLX1O14810 134 aa26.13■■□□□ 1.77
SNF8-209ENST00000510558 TAP1Q03518 808 aa26.13■■□□□ 1.77
SNF8-209ENST00000510558 SSRP1Q08945 709 aaKnown RBP26.13■■□□□ 1.77
SNF8-209ENST00000510558 FAM26DQ5JW98 314 aa26.13■■□□□ 1.77
SNF8-209ENST00000510558 RPAINQ86UA6 219 aa26.13■■□□□ 1.77
SNF8-209ENST00000510558 SH3GLB2Q9NR46 395 aa26.13■■□□□ 1.77
SNF8-209ENST00000510558 RRN3P2A6NIE6 340 aa26.12■■□□□ 1.77
SNF8-209ENST00000510558 ATG7O95352 703 aa26.12■■□□□ 1.77
SNF8-209ENST00000510558 GJB5O95377 273 aa26.12■■□□□ 1.77
SNF8-209ENST00000510558 CENPBP07199 599 aaPredicted RBP26.12■■□□□ 1.77
SNF8-209ENST00000510558 INSRRP14616 1297 aa26.12■■□□□ 1.77
SNF8-209ENST00000510558 STAT5BP51692 787 aa26.12■■□□□ 1.77
SNF8-209ENST00000510558 IGBP1P78318 339 aa26.12■■□□□ 1.77
SNF8-209ENST00000510558 STK3Q13188 491 aa26.12■■□□□ 1.77
SNF8-209ENST00000510558 MKRN4PQ13434 485 aaPredicted RBP26.12■■□□□ 1.77
SNF8-209ENST00000510558 MARCH8Q5T0T0 291 aa26.12■■□□□ 1.77
SNF8-209ENST00000510558 LIN28BQ6ZN17 250 aaKnown RBP eCLIP26.12■■□□□ 1.77
SNF8-209ENST00000510558 PLPPR4Q7Z2D5 763 aa26.12■■□□□ 1.77
SNF8-209ENST00000510558 SEPT8Q92599 483 aa26.12■■□□□ 1.77
SNF8-209ENST00000510558 CERS4Q9HA82 394 aa26.12■■□□□ 1.77
SNF8-209ENST00000510558 TRPC6Q9Y210 931 aa26.12■■□□□ 1.77
SNF8-209ENST00000510558 UNC80Q8N2C7 3258 aa26.11■■□□□ 1.77
SNF8-209ENST00000510558 LCHNA4D1U4 455 aa26.11■■□□□ 1.77
SNF8-209ENST00000510558 IPO5O00410 1097 aaKnown RBP26.11■■□□□ 1.77
SNF8-209ENST00000510558 CCNE2O96020 404 aa26.11■■□□□ 1.77
SNF8-209ENST00000510558 SETQ01105 290 aaPredicted RBP26.11■■□□□ 1.77
SNF8-209ENST00000510558 PLCB4Q15147 1175 aa26.11■■□□□ 1.77
SNF8-209ENST00000510558 RSPH3Q86UC2 560 aa26.11■■□□□ 1.77
SNF8-209ENST00000510558 PPM1EQ8WY54 764 aa26.11■■□□□ 1.77
SNF8-209ENST00000510558 MYH9P35579 1960 aaKnown RBP26.11■■□□□ 1.77
SNF8-209ENST00000510558 DHX15O43143 795 aaKnown RBP26.1■■□□□ 1.77
SNF8-209ENST00000510558 DEXIO95424 95 aa26.1■■□□□ 1.77
SNF8-209ENST00000510558 CHRNA1P02708 482 aa26.1■■□□□ 1.77
SNF8-209ENST00000510558 AMHP03971 560 aa26.1■■□□□ 1.77
SNF8-209ENST00000510558 NLRP5P59047 1200 aa26.1■■□□□ 1.77
SNF8-209ENST00000510558 FAM117BQ6P1L5 589 aa26.1■■□□□ 1.77
SNF8-209ENST00000510558 CPLX2Q6PUV4 134 aaKnown RBP26.1■■□□□ 1.77
SNF8-209ENST00000510558 DNAJB3Q8WWF6 145 aa26.1■■□□□ 1.77
SNF8-209ENST00000510558 TNPO1Q92973 898 aaKnown RBP26.1■■□□□ 1.77
SNF8-209ENST00000510558 UIMC1Q96RL1 719 aa26.1■■□□□ 1.77
SNF8-209ENST00000510558 ZNF577Q9BSK1 485 aa26.1■■□□□ 1.77
SNF8-209ENST00000510558 IGKV6D-21A0A0A0MT36 114 aa26.09■■□□□ 1.77
SNF8-209ENST00000510558 CIITAP33076 1130 aa26.09■■□□□ 1.77
SNF8-209ENST00000510558 MGAT3Q09327 533 aa26.09■■□□□ 1.77
SNF8-209ENST00000510558 PRR16Q569H4 304 aa26.09■■□□□ 1.77
SNF8-209ENST00000510558 ABHD15Q6UXT9 468 aa26.09■■□□□ 1.77
SNF8-209ENST00000510558 MYOCDQ8IZQ8 938 aa26.09■■□□□ 1.77
SNF8-209ENST00000510558 ARNTL2Q8WYA1 636 aa26.09■■□□□ 1.77
SNF8-209ENST00000510558 ZBTB10Q96DT7 871 aa26.09■■□□□ 1.77
SNF8-209ENST00000510558 RAD9AQ99638 391 aa26.09■■□□□ 1.77
SNF8-209ENST00000510558 WDR81Q562E7 1941 aa26.09■■□□□ 1.77
SNF8-209ENST00000510558 PRUNE2Q8WUY3 3088 aa26.09■■□□□ 1.77
SNF8-209ENST00000510558 COL4A4P53420 1690 aaPredicted RBP26.09■■□□□ 1.77
SNF8-209ENST00000510558 POTEB3A0JP26 581 aa26.08■■□□□ 1.77
SNF8-209ENST00000510558 EPOPA6NHQ4 379 aa26.08■■□□□ 1.77
SNF8-209ENST00000510558 RFXAPO00287 272 aa26.08■■□□□ 1.77
SNF8-209ENST00000510558 BACH1O14867 736 aa26.08■■□□□ 1.77
SNF8-209ENST00000510558 SLC26A2P50443 739 aa26.08■■□□□ 1.77
SNF8-209ENST00000510558 ANAPC15P60006 121 aa26.08■■□□□ 1.77
SNF8-209ENST00000510558 FAM160B1Q5W0V3 765 aa26.08■■□□□ 1.77
SNF8-209ENST00000510558 POTEBQ6S5H4 581 aa26.08■■□□□ 1.77
SNF8-209ENST00000510558 SPRED2Q7Z698 418 aa26.08■■□□□ 1.77
SNF8-209ENST00000510558 APBB2Q92870 758 aa26.08■■□□□ 1.77
SNF8-209ENST00000510558 IFIH1Q9BYX4 1025 aaKnown RBP26.08■■□□□ 1.77
SNF8-209ENST00000510558 TBC1D22BQ9NU19 505 aa26.08■■□□□ 1.77
SNF8-209ENST00000510558 LOXHD1Q8IVV2 1947 aa26.08■■□□□ 1.76
SNF8-209ENST00000510558 CCDC85BQ15834 202 aaPredicted RBP26.07■■□□□ 1.76
SNF8-209ENST00000510558 CCDC60Q8IWA6 550 aaPredicted RBP26.07■■□□□ 1.76
SNF8-209ENST00000510558 TRAPPC12Q8WVT3 735 aa26.07■■□□□ 1.76
SNF8-209ENST00000510558 FAM49AQ9H0Q0 323 aaPredicted RBP26.07■■□□□ 1.76
SNF8-209ENST00000510558 GHRP10912 638 aa26.06■■□□□ 1.76
SNF8-209ENST00000510558 ZNF746Q6NUN9 644 aaPredicted RBP26.06■■□□□ 1.76
SNF8-209ENST00000510558 MIS18BP1Q6P0N0 1132 aa26.06■■□□□ 1.76
SNF8-209ENST00000510558 LENG9Q96B70 501 aa26.06■■□□□ 1.76
SNF8-209ENST00000510558 ZNF302Q9NR11 478 aa26.06■■□□□ 1.76
SNF8-209ENST00000510558 PCDHA4Q9UN74 947 aa26.06■■□□□ 1.76
SNF8-209ENST00000510558 CDY2AQ9Y6F7 541 aa26.06■■□□□ 1.76
SNF8-209ENST00000510558 A0A0C4DFX4 3053 aa26.06■■□□□ 1.76
SNF8-209ENST00000510558 PRRC2BQ5JSZ5 2229 aaKnown RBP26.05■■□□□ 1.76
SNF8-209ENST00000510558 EDIL3O43854 480 aa26.05■■□□□ 1.76
SNF8-209ENST00000510558 RPLP2P05387 115 aaKnown RBP26.05■■□□□ 1.76
SNF8-209ENST00000510558 MRPS6P82932 125 aaKnown RBP26.05■■□□□ 1.76
SNF8-209ENST00000510558 SCRN1Q12765 414 aa26.05■■□□□ 1.76
SNF8-209ENST00000510558 PDXDC2PQ6P474 469 aa26.05■■□□□ 1.76
SNF8-209ENST00000510558 AIFM3Q96NN9 605 aa26.05■■□□□ 1.76
SNF8-209ENST00000510558 SLKQ9H2G2 1235 aaPredicted RBP26.05■■□□□ 1.76
SNF8-209ENST00000510558 PRDM6Q9NQX0 595 aa26.05■■□□□ 1.76
SNF8-209ENST00000510558 TCEAL9Q9UHQ7 104 aa26.05■■□□□ 1.76
SNF8-209ENST00000510558 INSL6Q9Y581 213 aa26.05■■□□□ 1.76
SNF8-209ENST00000510558 PCDHA2Q9Y5H9 948 aa26.05■■□□□ 1.76
SNF8-209ENST00000510558 EVPLQ92817 2033 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms